Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 MIR103A2-201ENST00000362154 78 ntBASIC1.11□□□□□ -2.23
SLC44A1Q8WWI5 Y_RNA.116-201ENST00000363292 103 ntBASIC1.11□□□□□ -2.23
SLC44A1Q8WWI5 Y_RNA.337-201ENST00000365312 102 ntBASIC1.11□□□□□ -2.23
SLC44A1Q8WWI5 Y_RNA.357-201ENST00000365487 109 ntBASIC1.11□□□□□ -2.23
SLC44A1Q8WWI5 SNORA25-201ENST00000384384 134 ntBASIC1.11□□□□□ -2.23
SLC44A1Q8WWI5 SNORA80D-201ENST00000384488 135 ntBASIC1.11□□□□□ -2.23
SLC44A1Q8WWI5 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
SLC44A1Q8WWI5 RNU6-910P-201ENST00000390844 107 ntBASIC1.11□□□□□ -2.23
SLC44A1Q8WWI5 RNU6-239P-201ENST00000390990 99 ntBASIC1.11□□□□□ -2.23
SLC44A1Q8WWI5 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.11□□□□□ -2.23
SLC44A1Q8WWI5 MIR1185-1-201ENST00000408598 86 ntBASIC1.11□□□□□ -2.23
SLC44A1Q8WWI5 MIR1302-7-201ENST00000408841 72 ntBASIC1.11□□□□□ -2.23
SLC44A1Q8WWI5 RNU6-1135P-201ENST00000411083 103 ntBASIC1.11□□□□□ -2.23
SLC44A1Q8WWI5 RNU5E-9P-201ENST00000411164 104 ntBASIC1.11□□□□□ -2.23
SLC44A1Q8WWI5 RNU6-998P-201ENST00000515894 101 ntBASIC1.11□□□□□ -2.23
SLC44A1Q8WWI5 SNORD79.1-201ENST00000516069 84 ntBASIC1.11□□□□□ -2.23
SLC44A1Q8WWI5 RNU7-121P-201ENST00000516604 62 ntBASIC1.11□□□□□ -2.23
SLC44A1Q8WWI5 RNU7-53P-201ENST00000516705 60 ntBASIC1.11□□□□□ -2.23
SLC44A1Q8WWI5 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.11□□□□□ -2.23
SLC44A1Q8WWI5 MIR6504-201ENST00000613520 61 ntBASIC1.11□□□□□ -2.23
SLC44A1Q8WWI5 FTX_2.1-201ENST00000618816 94 ntBASIC1.11□□□□□ -2.23
SLC44A1Q8WWI5 MIR7111-201ENST00000619751 72 ntBASIC1.11□□□□□ -2.23
SLC44A1Q8WWI5 AC027335.2-201ENST00000624030 375 ntBASIC1.11□□□□□ -2.23
SLC44A1Q8WWI5 Y_RNA.224-201ENST00000364308 111 ntBASIC1.1□□□□□ -2.23
SLC44A1Q8WWI5 Y_RNA.355-201ENST00000365462 98 ntBASIC1.1□□□□□ -2.23
SLC44A1Q8WWI5 Y_RNA.521-201ENST00000384560 114 ntBASIC1.1□□□□□ -2.23
SLC44A1Q8WWI5 MRPL35P3-201ENST00000421557 364 ntBASIC1.1□□□□□ -2.23
SLC44A1Q8WWI5 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.1□□□□□ -2.23
SLC44A1Q8WWI5 MIR3646-201ENST00000578301 84 ntBASIC1.1□□□□□ -2.23
SLC44A1Q8WWI5 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
SLC44A1Q8WWI5 SNORA25.3-201ENST00000363205 127 ntBASIC1.09□□□□□ -2.23
SLC44A1Q8WWI5 RNU6-768P-201ENST00000384683 107 ntBASIC1.09□□□□□ -2.23
SLC44A1Q8WWI5 MIR1276-201ENST00000408707 83 ntBASIC1.09□□□□□ -2.23
SLC44A1Q8WWI5 AL035398.1-201ENST00000430869 322 ntBASIC1.09□□□□□ -2.23
SLC44A1Q8WWI5 RNU7-67P-201ENST00000459003 62 ntBASIC1.09□□□□□ -2.23
SLC44A1Q8WWI5 RNU7-21P-201ENST00000459430 62 ntBASIC1.09□□□□□ -2.23
SLC44A1Q8WWI5 MIR548AO-201ENST00000579992 96 ntBASIC1.09□□□□□ -2.23
SLC44A1Q8WWI5 AC098479.1-201ENST00000609225 154 ntBASIC1.09□□□□□ -2.23
SLC44A1Q8WWI5 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.08□□□□□ -2.24
SLC44A1Q8WWI5 MIR222-201ENST00000384992 110 ntBASIC1.08□□□□□ -2.24
SLC44A1Q8WWI5 SNORA75.2-201ENST00000391138 150 ntBASIC1.08□□□□□ -2.24
SLC44A1Q8WWI5 SNORA75.3-201ENST00000391231 150 ntBASIC1.08□□□□□ -2.24
SLC44A1Q8WWI5 RNU7-80P-201ENST00000459562 61 ntBASIC1.08□□□□□ -2.24
SLC44A1Q8WWI5 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.08□□□□□ -2.24
SLC44A1Q8WWI5 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.08□□□□□ -2.24
SLC44A1Q8WWI5 SEPT14P17-201ENST00000617978 177 ntBASIC1.08□□□□□ -2.24
SLC44A1Q8WWI5 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
SLC44A1Q8WWI5 Y_RNA.191-201ENST00000363972 113 ntBASIC1.07□□□□□ -2.24
SLC44A1Q8WWI5 Y_RNA.454-201ENST00000384224 113 ntBASIC1.07□□□□□ -2.24
SLC44A1Q8WWI5 MIR19B1-201ENST00000384829 87 ntBASIC1.07□□□□□ -2.24
SLC44A1Q8WWI5 SNORA75.5-201ENST00000391291 81 ntBASIC1.07□□□□□ -2.24
SLC44A1Q8WWI5 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.07□□□□□ -2.24
SLC44A1Q8WWI5 RNA5SP102-201ENST00000516865 106 ntBASIC1.07□□□□□ -2.24
SLC44A1Q8WWI5 SCARNA15-202ENST00000516881 127 ntBASIC1.07□□□□□ -2.24
SLC44A1Q8WWI5 RNU6-958P-201ENST00000516995 106 ntBASIC1.07□□□□□ -2.24
SLC44A1Q8WWI5 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.07□□□□□ -2.24
SLC44A1Q8WWI5 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
SLC44A1Q8WWI5 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.06□□□□□ -2.24
SLC44A1Q8WWI5 RNU1-124P-201ENST00000363861 145 ntBASIC1.06□□□□□ -2.24
SLC44A1Q8WWI5 Y_RNA.272-201ENST00000364696 102 ntBASIC1.06□□□□□ -2.24
SLC44A1Q8WWI5 SNORA22-201ENST00000383907 134 ntBASIC1.06□□□□□ -2.24
SLC44A1Q8WWI5 SNORA22C-201ENST00000384614 134 ntBASIC1.06□□□□□ -2.24
SLC44A1Q8WWI5 Y_RNA.555-201ENST00000384673 110 ntBASIC1.06□□□□□ -2.24
SLC44A1Q8WWI5 PCNPP3-201ENST00000393579 471 ntBASIC1.06□□□□□ -2.24
SLC44A1Q8WWI5 RNU6-613P-201ENST00000410412 108 ntBASIC1.06□□□□□ -2.24
SLC44A1Q8WWI5 snoU13.18-201ENST00000459483 104 ntBASIC1.06□□□□□ -2.24
SLC44A1Q8WWI5 OR2A41P-201ENST00000473586 105 ntBASIC1.06□□□□□ -2.24
SLC44A1Q8WWI5 RPS23P4-201ENST00000487908 423 ntBASIC1.06□□□□□ -2.24
SLC44A1Q8WWI5 MIR2115-201ENST00000516657 100 ntBASIC1.06□□□□□ -2.24
SLC44A1Q8WWI5 RNA5SP404-201ENST00000517118 132 ntBASIC1.06□□□□□ -2.24
SLC44A1Q8WWI5 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.06□□□□□ -2.24
SLC44A1Q8WWI5 DNAJC19P2-201ENST00000593340 302 ntBASIC1.06□□□□□ -2.24
SLC44A1Q8WWI5 AC103810.9-201ENST00000606688 112 ntBASIC1.06□□□□□ -2.24
SLC44A1Q8WWI5 MIR8055-201ENST00000610739 97 ntBASIC1.06□□□□□ -2.24
SLC44A1Q8WWI5 MIR377-201ENST00000362145 69 ntBASIC1.05□□□□□ -2.24
SLC44A1Q8WWI5 RNU6-396P-201ENST00000365369 105 ntBASIC1.05□□□□□ -2.24
SLC44A1Q8WWI5 Y_RNA.351-201ENST00000365436 96 ntBASIC1.05□□□□□ -2.24
SLC44A1Q8WWI5 RNU6-886P-201ENST00000384319 105 ntBASIC1.05□□□□□ -2.24
SLC44A1Q8WWI5 MT-TN-201ENST00000387400 73 ntBASIC1.05□□□□□ -2.24
SLC44A1Q8WWI5 RNU6-913P-201ENST00000390913 95 ntBASIC1.05□□□□□ -2.24
SLC44A1Q8WWI5 MIR548I3-201ENST00000408378 149 ntBASIC1.05□□□□□ -2.24
SLC44A1Q8WWI5 AC063976.4-201ENST00000421971 163 ntBASIC1.05□□□□□ -2.24
SLC44A1Q8WWI5 RNU2-11P-201ENST00000459191 187 ntBASIC1.05□□□□□ -2.24
SLC44A1Q8WWI5 RNU7-90P-201ENST00000459216 62 ntBASIC1.05□□□□□ -2.24
SLC44A1Q8WWI5 MIR3668-201ENST00000582138 75 ntBASIC1.05□□□□□ -2.24
SLC44A1Q8WWI5 MIR4452-201ENST00000583004 71 ntBASIC1.05□□□□□ -2.24
SLC44A1Q8WWI5 HSPE1P19-201ENST00000603327 295 ntBASIC1.05□□□□□ -2.24
SLC44A1Q8WWI5 SNORD114-21-201ENST00000606412 72 ntBASIC1.05□□□□□ -2.24
SLC44A1Q8WWI5 AL020996.3-201ENST00000606617 222 ntBASIC1.05□□□□□ -2.24
SLC44A1Q8WWI5 Z97988.1-201ENST00000637697 135 ntBASIC1.05□□□□□ -2.24
SLC44A1Q8WWI5 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
SLC44A1Q8WWI5 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.05□□□□□ -2.24
SLC44A1Q8WWI5 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
SLC44A1Q8WWI5 MIR96-201ENST00000362288 78 ntBASIC1.04□□□□□ -2.24
SLC44A1Q8WWI5 Y_RNA.270-201ENST00000364693 104 ntBASIC1.04□□□□□ -2.24
SLC44A1Q8WWI5 AC002429.1-201ENST00000437672 148 ntBASIC1.04□□□□□ -2.24
SLC44A1Q8WWI5 AC074198.2-201ENST00000508153 258 ntBASIC1.04□□□□□ -2.24
SLC44A1Q8WWI5 AC091932.4-201ENST00000623386 200 ntBASIC1.04□□□□□ -2.24
SLC44A1Q8WWI5 MIR6516-201ENST00000630554 81 ntBASIC1.04□□□□□ -2.24
SLC44A1Q8WWI5 MIR6844-201ENST00000637122 62 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 264.9 ms