Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 FO082796.1-201ENST00000523795 183 ntBASIC-1.22□□□□□ -2.61
RTL9Q8NET4 MIR3942-201ENST00000585264 109 ntBASIC-1.22□□□□□ -2.61
RTL9Q8NET4 MIR4320-201ENST00000636981 65 ntBASIC-1.22□□□□□ -2.61
RTL9Q8NET4 RNY1P13-201ENST00000365030 105 ntBASIC-1.23□□□□□ -2.61
RTL9Q8NET4 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.23□□□□□ -2.61
RTL9Q8NET4 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.23□□□□□ -2.61
RTL9Q8NET4 MIR181B2-201ENST00000385004 89 ntBASIC-1.23□□□□□ -2.61
RTL9Q8NET4 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.23□□□□□ -2.61
RTL9Q8NET4 MTND1P2-201ENST00000430604 821 ntBASIC-1.23□□□□□ -2.61
RTL9Q8NET4 MIR2053-201ENST00000459295 91 ntBASIC-1.23□□□□□ -2.61
RTL9Q8NET4 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.23□□□□□ -2.61
RTL9Q8NET4 MIR378F-201ENST00000578143 78 ntBASIC-1.23□□□□□ -2.61
RTL9Q8NET4 MIR1244-1-201ENST00000612829 85 ntBASIC-1.23□□□□□ -2.61
RTL9Q8NET4 uc_338.19-201ENST00000616808 99 ntBASIC-1.23□□□□□ -2.61
RTL9Q8NET4 MIR1244-3-201ENST00000635744 85 ntBASIC-1.23□□□□□ -2.61
RTL9Q8NET4 MIR1244-2-201ENST00000636449 85 ntBASIC-1.23□□□□□ -2.61
RTL9Q8NET4 MIR1244-4-202ENST00000636813 85 ntBASIC-1.23□□□□□ -2.61
RTL9Q8NET4 RNA5SP133-201ENST00000363368 119 ntBASIC-1.24□□□□□ -2.61
RTL9Q8NET4 RNU4-16P-201ENST00000364737 141 ntBASIC-1.24□□□□□ -2.61
RTL9Q8NET4 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.24□□□□□ -2.61
RTL9Q8NET4 RN7SKP295-201ENST00000517264 153 ntBASIC-1.24□□□□□ -2.61
RTL9Q8NET4 AC005357.1-201ENST00000588399 301 ntBASIC-1.24□□□□□ -2.61
RTL9Q8NET4 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.24□□□□□ -2.61
RTL9Q8NET4 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.25□□□□□ -2.61
RTL9Q8NET4 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.25□□□□□ -2.61
RTL9Q8NET4 Y_RNA.486-201ENST00000384398 107 ntBASIC-1.25□□□□□ -2.61
RTL9Q8NET4 RNU6-881P-201ENST00000516813 102 ntBASIC-1.25□□□□□ -2.61
RTL9Q8NET4 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.25□□□□□ -2.61
RTL9Q8NET4 MIR3115-201ENST00000577915 68 ntBASIC-1.25□□□□□ -2.61
RTL9Q8NET4 MIR4499-201ENST00000584834 69 ntBASIC-1.25□□□□□ -2.61
RTL9Q8NET4 DEFB117-201ENST00000602356 141 ntBASIC-1.25□□□□□ -2.61
RTL9Q8NET4 MIR3662-201ENST00000637030 95 ntBASIC-1.25□□□□□ -2.61
RTL9Q8NET4 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.26□□□□□ -2.61
RTL9Q8NET4 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.26□□□□□ -2.61
RTL9Q8NET4 RNU6-901P-201ENST00000384593 106 ntBASIC-1.26□□□□□ -2.61
RTL9Q8NET4 MIR601-201ENST00000385256 79 ntBASIC-1.26□□□□□ -2.61
RTL9Q8NET4 RNU6-332P-201ENST00000391193 108 ntBASIC-1.26□□□□□ -2.61
RTL9Q8NET4 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.26□□□□□ -2.61
RTL9Q8NET4 RN7SKP19-201ENST00000516016 252 ntBASIC-1.26□□□□□ -2.61
RTL9Q8NET4 RNA5SP461-201ENST00000516451 104 ntBASIC-1.26□□□□□ -2.61
RTL9Q8NET4 MIR4473-201ENST00000583731 91 ntBASIC-1.26□□□□□ -2.61
RTL9Q8NET4 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-1.26□□□□□ -2.61
RTL9Q8NET4 SNORD114-29-201ENST00000364819 70 ntBASIC-1.27□□□□□ -2.61
RTL9Q8NET4 Y_RNA.440-201ENST00000384120 114 ntBASIC-1.27□□□□□ -2.61
RTL9Q8NET4 SNORD61-201ENST00000384252 73 ntBASIC-1.27□□□□□ -2.61
RTL9Q8NET4 Y_RNA.473-201ENST00000384333 102 ntBASIC-1.27□□□□□ -2.61
RTL9Q8NET4 SNORA18-201ENST00000384416 132 ntBASIC-1.27□□□□□ -2.61
RTL9Q8NET4 MIR548A2-201ENST00000384956 97 ntBASIC-1.27□□□□□ -2.61
RTL9Q8NET4 AC100767.1-201ENST00000528178 123 ntBASIC-1.27□□□□□ -2.61
RTL9Q8NET4 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.27□□□□□ -2.61
RTL9Q8NET4 MIR4662B-201ENST00000579498 81 ntBASIC-1.27□□□□□ -2.61
RTL9Q8NET4 MIR548H5-201ENST00000580314 60 ntBASIC-1.27□□□□□ -2.61
RTL9Q8NET4 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.27□□□□□ -2.61
RTL9Q8NET4 AL049861.1-201ENST00000603130 150 ntBASIC-1.27□□□□□ -2.61
RTL9Q8NET4 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-1.28□□□□□ -2.61
RTL9Q8NET4 SNORD114-25-201ENST00000363742 72 ntBASIC-1.28□□□□□ -2.61
RTL9Q8NET4 RNU4-36P-201ENST00000364294 144 ntBASIC-1.28□□□□□ -2.61
RTL9Q8NET4 Y_RNA.351-201ENST00000365436 96 ntBASIC-1.28□□□□□ -2.61
RTL9Q8NET4 SNORD24-201ENST00000383884 75 ntBASIC-1.28□□□□□ -2.61
RTL9Q8NET4 RNU6-1189P-201ENST00000383958 107 ntBASIC-1.28□□□□□ -2.61
RTL9Q8NET4 RNU6-1270P-201ENST00000517128 108 ntBASIC-1.28□□□□□ -2.61
RTL9Q8NET4 MTND3P12-201ENST00000559068 328 ntBASIC-1.28□□□□□ -2.61
RTL9Q8NET4 AC011476.5-201ENST00000615594 130 ntBASIC-1.28□□□□□ -2.61
RTL9Q8NET4 AC092794.2-201ENST00000620933 563 ntBASIC-1.28□□□□□ -2.61
RTL9Q8NET4 MIR6863-201ENST00000636112 90 ntBASIC-1.28□□□□□ -2.61
RTL9Q8NET4 Y_RNA.410-201ENST00000383992 113 ntBASIC-1.29□□□□□ -2.62
RTL9Q8NET4 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.29□□□□□ -2.62
RTL9Q8NET4 MIR9-2-201ENST00000384838 87 ntBASIC-1.29□□□□□ -2.62
RTL9Q8NET4 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-1.29□□□□□ -2.62
RTL9Q8NET4 SNORA69.1-201ENST00000390904 137 ntBASIC-1.29□□□□□ -2.62
RTL9Q8NET4 SNORD78.2-201ENST00000391076 69 ntBASIC-1.29□□□□□ -2.62
RTL9Q8NET4 RNU2-14P-201ENST00000411053 191 ntBASIC-1.29□□□□□ -2.62
RTL9Q8NET4 AL160004.2-201ENST00000432935 350 ntBASIC-1.29□□□□□ -2.62
RTL9Q8NET4 AL500527.2-201ENST00000454105 95 ntBASIC-1.29□□□□□ -2.62
RTL9Q8NET4 Y_RNA.693-201ENST00000516641 110 ntBASIC-1.29□□□□□ -2.62
RTL9Q8NET4 RNU6-566P-201ENST00000516790 107 ntBASIC-1.29□□□□□ -2.62
RTL9Q8NET4 RNU6-1088P-201ENST00000516850 104 ntBASIC-1.29□□□□□ -2.62
RTL9Q8NET4 AL512360.1-201ENST00000555346 234 ntBASIC-1.29□□□□□ -2.62
RTL9Q8NET4 MIR4723-201ENST00000585070 81 ntBASIC-1.29□□□□□ -2.62
RTL9Q8NET4 U6.109-201ENST00000636749 87 ntBASIC-1.29□□□□□ -2.62
RTL9Q8NET4 SNORA75-201ENST00000384158 137 ntBASIC-1.3□□□□□ -2.62
RTL9Q8NET4 SNORA20-201ENST00000384662 132 ntBASIC-1.3□□□□□ -2.62
RTL9Q8NET4 Y_RNA.582-201ENST00000391023 95 ntBASIC-1.3□□□□□ -2.62
RTL9Q8NET4 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.3□□□□□ -2.62
RTL9Q8NET4 AF228730.3-201ENST00000436691 102 ntBASIC-1.3□□□□□ -2.62
RTL9Q8NET4 AL445567.1-201ENST00000439121 144 ntBASIC-1.3□□□□□ -2.62
RTL9Q8NET4 RNU7-74P-201ENST00000459104 62 ntBASIC-1.3□□□□□ -2.62
RTL9Q8NET4 RNU6-864P-201ENST00000516256 108 ntBASIC-1.3□□□□□ -2.62
RTL9Q8NET4 MIR4659A-201ENST00000580269 81 ntBASIC-1.3□□□□□ -2.62
RTL9Q8NET4 AL162413.1-201ENST00000603198 110 ntBASIC-1.3□□□□□ -2.62
RTL9Q8NET4 AL603755.1-201ENST00000619504 163 ntBASIC-1.3□□□□□ -2.62
RTL9Q8NET4 SNORD115-2-201ENST00000362842 82 ntBASIC-1.31□□□□□ -2.62
RTL9Q8NET4 RNU1-141P-201ENST00000364623 158 ntBASIC-1.31□□□□□ -2.62
RTL9Q8NET4 SNORA72.4-201ENST00000384174 132 ntBASIC-1.31□□□□□ -2.62
RTL9Q8NET4 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.31□□□□□ -2.62
RTL9Q8NET4 MIR4280-201ENST00000582178 76 ntBASIC-1.31□□□□□ -2.62
RTL9Q8NET4 NBR2-204ENST00000587322 63 ntBASIC-1.31□□□□□ -2.62
RTL9Q8NET4 RNU6-888P-201ENST00000363010 101 ntBASIC-1.32□□□□□ -2.62
RTL9Q8NET4 Y_RNA.331-201ENST00000365267 102 ntBASIC-1.32□□□□□ -2.62
RTL9Q8NET4 RNU6-1013P-201ENST00000384180 107 ntBASIC-1.32□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 289 ms