Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 RNU7-21P-201ENST00000459430 62 ntBASIC1.2□□□□□ -2.22
USP38Q8NB14 AC023827.1-201ENST00000569247 97 ntBASIC1.2□□□□□ -2.22
USP38Q8NB14 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.2□□□□□ -2.22
USP38Q8NB14 MIR548AO-201ENST00000579992 96 ntBASIC1.2□□□□□ -2.22
USP38Q8NB14 AC108706.1-201ENST00000611053 297 ntBASIC1.2□□□□□ -2.22
USP38Q8NB14 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
USP38Q8NB14 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.19□□□□□ -2.22
USP38Q8NB14 SNORD115-34-201ENST00000362441 82 ntBASIC1.19□□□□□ -2.22
USP38Q8NB14 Y_RNA.23-201ENST00000362496 106 ntBASIC1.19□□□□□ -2.22
USP38Q8NB14 SNORD115-12-201ENST00000362583 82 ntBASIC1.19□□□□□ -2.22
USP38Q8NB14 SNORD115-29-201ENST00000362834 82 ntBASIC1.19□□□□□ -2.22
USP38Q8NB14 SNORD115-9-201ENST00000362912 82 ntBASIC1.19□□□□□ -2.22
USP38Q8NB14 SNORD115-21-201ENST00000362963 81 ntBASIC1.19□□□□□ -2.22
USP38Q8NB14 SNORD115-14-201ENST00000363090 81 ntBASIC1.19□□□□□ -2.22
USP38Q8NB14 SNORD115-13-201ENST00000363358 82 ntBASIC1.19□□□□□ -2.22
USP38Q8NB14 SNORD115-41-201ENST00000363608 82 ntBASIC1.19□□□□□ -2.22
USP38Q8NB14 SNORD115-11-201ENST00000363616 82 ntBASIC1.19□□□□□ -2.22
USP38Q8NB14 SNORD115-5-201ENST00000363633 82 ntBASIC1.19□□□□□ -2.22
USP38Q8NB14 SNORD115-39-201ENST00000363694 82 ntBASIC1.19□□□□□ -2.22
USP38Q8NB14 SNORD115-4-201ENST00000363810 82 ntBASIC1.19□□□□□ -2.22
USP38Q8NB14 SNORD115-16-201ENST00000363887 82 ntBASIC1.19□□□□□ -2.22
USP38Q8NB14 SNORD115-6-201ENST00000363942 82 ntBASIC1.19□□□□□ -2.22
USP38Q8NB14 SNORD115-42-201ENST00000364273 82 ntBASIC1.19□□□□□ -2.22
USP38Q8NB14 SNORD115-15-201ENST00000364809 81 ntBASIC1.19□□□□□ -2.22
USP38Q8NB14 SNORD115-1-201ENST00000364961 82 ntBASIC1.19□□□□□ -2.22
USP38Q8NB14 SNORD115-26-201ENST00000365067 82 ntBASIC1.19□□□□□ -2.22
USP38Q8NB14 SNORD115-10-201ENST00000365073 81 ntBASIC1.19□□□□□ -2.22
USP38Q8NB14 SNORD115-43-201ENST00000365503 82 ntBASIC1.19□□□□□ -2.22
USP38Q8NB14 SNORD115-36-201ENST00000365629 82 ntBASIC1.19□□□□□ -2.22
USP38Q8NB14 SNORA27-201ENST00000384323 126 ntBASIC1.19□□□□□ -2.22
USP38Q8NB14 SNORD12-201ENST00000391002 90 ntBASIC1.19□□□□□ -2.22
USP38Q8NB14 SNORA40.5-201ENST00000391061 128 ntBASIC1.19□□□□□ -2.22
USP38Q8NB14 AL138752.1-201ENST00000452964 351 ntBASIC1.19□□□□□ -2.22
USP38Q8NB14 AC036111.3-201ENST00000526389 112 ntBASIC1.19□□□□□ -2.22
USP38Q8NB14 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
USP38Q8NB14 MIR3973-201ENST00000579824 107 ntBASIC1.19□□□□□ -2.22
USP38Q8NB14 MIR3129-201ENST00000581095 76 ntBASIC1.19□□□□□ -2.22
USP38Q8NB14 SNORD115-40-201ENST00000606510 82 ntBASIC1.19□□□□□ -2.22
USP38Q8NB14 SEPT14P17-201ENST00000617978 177 ntBASIC1.19□□□□□ -2.22
USP38Q8NB14 SNORA1-201ENST00000384107 130 ntBASIC1.18□□□□□ -2.22
USP38Q8NB14 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
USP38Q8NB14 RNU6-938P-201ENST00000411285 103 ntBASIC1.18□□□□□ -2.22
USP38Q8NB14 RPS29P28-201ENST00000446439 141 ntBASIC1.18□□□□□ -2.22
USP38Q8NB14 OR2A41P-201ENST00000473586 105 ntBASIC1.18□□□□□ -2.22
USP38Q8NB14 SNORA18.4-201ENST00000516440 124 ntBASIC1.18□□□□□ -2.22
USP38Q8NB14 MIR411-201ENST00000362239 96 ntBASIC1.17□□□□□ -2.22
USP38Q8NB14 RNU6-1189P-201ENST00000383958 107 ntBASIC1.17□□□□□ -2.22
USP38Q8NB14 HSPE1P19-201ENST00000603327 295 ntBASIC1.17□□□□□ -2.22
USP38Q8NB14 AP000942.4-201ENST00000604811 241 ntBASIC1.17□□□□□ -2.22
USP38Q8NB14 MIR924-201ENST00000638017 53 ntBASIC1.17□□□□□ -2.22
USP38Q8NB14 Y_RNA.85-201ENST00000363014 111 ntBASIC1.16□□□□□ -2.22
USP38Q8NB14 Y_RNA.121-201ENST00000363309 113 ntBASIC1.16□□□□□ -2.22
USP38Q8NB14 RNU6-1020P-201ENST00000363684 107 ntBASIC1.16□□□□□ -2.22
USP38Q8NB14 RNU6-379P-201ENST00000363813 104 ntBASIC1.16□□□□□ -2.22
USP38Q8NB14 Y_RNA.476-201ENST00000384347 108 ntBASIC1.16□□□□□ -2.22
USP38Q8NB14 RNA5SP95-201ENST00000410319 137 ntBASIC1.16□□□□□ -2.22
USP38Q8NB14 SNORD124-201ENST00000459577 104 ntBASIC1.16□□□□□ -2.22
USP38Q8NB14 RNU2-13P-201ENST00000515909 113 ntBASIC1.16□□□□□ -2.22
USP38Q8NB14 RNU6-388P-201ENST00000517012 105 ntBASIC1.16□□□□□ -2.22
USP38Q8NB14 RNU6-389P-201ENST00000517048 105 ntBASIC1.16□□□□□ -2.22
USP38Q8NB14 AP003716.2-201ENST00000528260 108 ntBASIC1.16□□□□□ -2.22
USP38Q8NB14 MIR4714-201ENST00000580728 77 ntBASIC1.16□□□□□ -2.22
USP38Q8NB14 AC097639.2-201ENST00000603159 172 ntBASIC1.16□□□□□ -2.22
USP38Q8NB14 AC078938.1-201ENST00000620993 318 ntBASIC1.16□□□□□ -2.22
USP38Q8NB14 RNU6-654P-201ENST00000364373 107 ntBASIC1.15□□□□□ -2.23
USP38Q8NB14 RNU6-396P-201ENST00000365369 105 ntBASIC1.15□□□□□ -2.23
USP38Q8NB14 Y_RNA.515-201ENST00000384535 112 ntBASIC1.15□□□□□ -2.23
USP38Q8NB14 MIR1302-7-201ENST00000408841 72 ntBASIC1.15□□□□□ -2.23
USP38Q8NB14 AC006461.1-201ENST00000412637 326 ntBASIC1.15□□□□□ -2.23
USP38Q8NB14 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.15□□□□□ -2.23
USP38Q8NB14 RPS29P24-201ENST00000486345 171 ntBASIC1.15□□□□□ -2.23
USP38Q8NB14 AC130289.1-201ENST00000577321 73 ntBASIC1.15□□□□□ -2.23
USP38Q8NB14 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.15□□□□□ -2.23
USP38Q8NB14 AC012676.2-201ENST00000619258 186 ntBASIC1.15□□□□□ -2.23
USP38Q8NB14 MIR6516-201ENST00000630554 81 ntBASIC1.15□□□□□ -2.23
USP38Q8NB14 RNU6-47P-201ENST00000383866 107 ntBASIC1.14□□□□□ -2.23
USP38Q8NB14 Y_RNA.410-201ENST00000383992 113 ntBASIC1.14□□□□□ -2.23
USP38Q8NB14 SNORA2B-201ENST00000384583 137 ntBASIC1.14□□□□□ -2.23
USP38Q8NB14 MIR942-201ENST00000401111 86 ntBASIC1.14□□□□□ -2.23
USP38Q8NB14 AL035398.1-201ENST00000430869 322 ntBASIC1.14□□□□□ -2.23
USP38Q8NB14 snoU13.16-201ENST00000459350 104 ntBASIC1.14□□□□□ -2.23
USP38Q8NB14 SNORD116-25-201ENST00000516517 92 ntBASIC1.14□□□□□ -2.23
USP38Q8NB14 MIR2115-201ENST00000516657 100 ntBASIC1.14□□□□□ -2.23
USP38Q8NB14 RNU11-2P-201ENST00000516898 142 ntBASIC1.14□□□□□ -2.23
USP38Q8NB14 MIR378D2-201ENST00000580636 98 ntBASIC1.14□□□□□ -2.23
USP38Q8NB14 AC009779.6-201ENST00000603972 165 ntBASIC1.14□□□□□ -2.23
USP38Q8NB14 U6.106-201ENST00000636360 105 ntBASIC1.14□□□□□ -2.23
USP38Q8NB14 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.14□□□□□ -2.23
USP38Q8NB14 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
USP38Q8NB14 RNU1-124P-201ENST00000363861 145 ntBASIC1.13□□□□□ -2.23
USP38Q8NB14 SNORD77.3-201ENST00000391113 65 ntBASIC1.13□□□□□ -2.23
USP38Q8NB14 RNU6-918P-201ENST00000391219 106 ntBASIC1.13□□□□□ -2.23
USP38Q8NB14 RNU4-43P-201ENST00000410628 137 ntBASIC1.13□□□□□ -2.23
USP38Q8NB14 SEPT7P4-201ENST00000437076 306 ntBASIC1.13□□□□□ -2.23
USP38Q8NB14 AL392103.1-201ENST00000447000 198 ntBASIC1.13□□□□□ -2.23
USP38Q8NB14 RNU7-53P-201ENST00000516705 60 ntBASIC1.13□□□□□ -2.23
USP38Q8NB14 Z83818.1-201ENST00000603584 150 ntBASIC1.13□□□□□ -2.23
USP38Q8NB14 SNORD114-21-201ENST00000606412 72 ntBASIC1.13□□□□□ -2.23
USP38Q8NB14 MIR6857-201ENST00000613267 93 ntBASIC1.13□□□□□ -2.23
USP38Q8NB14 MIR302B-201ENST00000362188 73 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms