Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 Y_RNA.441-201ENST00000384123 112 ntBASIC1.54□□□□□ -2.16
PRPF38AQ8NAV1 Y_RNA.494-201ENST00000384432 111 ntBASIC1.54□□□□□ -2.16
PRPF38AQ8NAV1 MIR499A-201ENST00000384903 122 ntBASIC1.54□□□□□ -2.16
PRPF38AQ8NAV1 SNORA75.2-201ENST00000391138 150 ntBASIC1.54□□□□□ -2.16
PRPF38AQ8NAV1 SNORA75.3-201ENST00000391231 150 ntBASIC1.54□□□□□ -2.16
PRPF38AQ8NAV1 RNU1-123P-201ENST00000458950 160 ntBASIC1.54□□□□□ -2.16
PRPF38AQ8NAV1 AC098479.1-201ENST00000609225 154 ntBASIC1.54□□□□□ -2.16
PRPF38AQ8NAV1 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.54□□□□□ -2.16
PRPF38AQ8NAV1 Y_RNA.270-201ENST00000364693 104 ntBASIC1.53□□□□□ -2.16
PRPF38AQ8NAV1 SNORA75.5-201ENST00000391291 81 ntBASIC1.53□□□□□ -2.16
PRPF38AQ8NAV1 RNA5SP261-201ENST00000410536 106 ntBASIC1.53□□□□□ -2.16
PRPF38AQ8NAV1 MRPL35P3-201ENST00000421557 364 ntBASIC1.53□□□□□ -2.16
PRPF38AQ8NAV1 RNU7-90P-201ENST00000459216 62 ntBASIC1.53□□□□□ -2.16
PRPF38AQ8NAV1 RNU7-40P-201ENST00000516397 64 ntBASIC1.53□□□□□ -2.16
PRPF38AQ8NAV1 RNA5SP61-201ENST00000516453 100 ntBASIC1.53□□□□□ -2.16
PRPF38AQ8NAV1 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.53□□□□□ -2.16
PRPF38AQ8NAV1 MIR3668-201ENST00000582138 75 ntBASIC1.53□□□□□ -2.16
PRPF38AQ8NAV1 MIR3660-201ENST00000584845 100 ntBASIC1.53□□□□□ -2.16
PRPF38AQ8NAV1 SEPT14P17-201ENST00000617978 177 ntBASIC1.53□□□□□ -2.16
PRPF38AQ8NAV1 SNORA25.9-201ENST00000365087 128 ntBASIC1.52□□□□□ -2.17
PRPF38AQ8NAV1 MIR1185-1-201ENST00000408598 86 ntBASIC1.52□□□□□ -2.17
PRPF38AQ8NAV1 RNU2-64P-201ENST00000411315 191 ntBASIC1.52□□□□□ -2.17
PRPF38AQ8NAV1 AC004223.1-201ENST00000479840 271 ntBASIC1.52□□□□□ -2.17
PRPF38AQ8NAV1 RNA5SP404-201ENST00000517118 132 ntBASIC1.52□□□□□ -2.17
PRPF38AQ8NAV1 MIR548AO-201ENST00000579992 96 ntBASIC1.52□□□□□ -2.17
PRPF38AQ8NAV1 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.51□□□□□ -2.17
PRPF38AQ8NAV1 RNU6-53P-201ENST00000365367 106 ntBASIC1.51□□□□□ -2.17
PRPF38AQ8NAV1 RNU6-768P-201ENST00000384683 107 ntBASIC1.51□□□□□ -2.17
PRPF38AQ8NAV1 MIR618-201ENST00000385287 98 ntBASIC1.51□□□□□ -2.17
PRPF38AQ8NAV1 SNORA40.6-201ENST00000391153 128 ntBASIC1.51□□□□□ -2.17
PRPF38AQ8NAV1 AC063976.4-201ENST00000421971 163 ntBASIC1.51□□□□□ -2.17
PRPF38AQ8NAV1 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.51□□□□□ -2.17
PRPF38AQ8NAV1 AL392103.1-201ENST00000447000 198 ntBASIC1.51□□□□□ -2.17
PRPF38AQ8NAV1 RNU2-11P-201ENST00000459191 187 ntBASIC1.51□□□□□ -2.17
PRPF38AQ8NAV1 RNU7-21P-201ENST00000459430 62 ntBASIC1.51□□□□□ -2.17
PRPF38AQ8NAV1 RNU7-121P-201ENST00000516604 62 ntBASIC1.51□□□□□ -2.17
PRPF38AQ8NAV1 MIR6078-201ENST00000611069 100 ntBASIC1.51□□□□□ -2.17
PRPF38AQ8NAV1 FTX_2.1-201ENST00000618816 94 ntBASIC1.51□□□□□ -2.17
PRPF38AQ8NAV1 AC091895.1-201ENST00000624494 256 ntBASIC1.51□□□□□ -2.17
PRPF38AQ8NAV1 MIR6844-201ENST00000637122 62 ntBASIC1.51□□□□□ -2.17
PRPF38AQ8NAV1 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
PRPF38AQ8NAV1 MIR1276-201ENST00000408707 83 ntBASIC1.5□□□□□ -2.17
PRPF38AQ8NAV1 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.5□□□□□ -2.17
PRPF38AQ8NAV1 DNAJC19P2-201ENST00000593340 302 ntBASIC1.5□□□□□ -2.17
PRPF38AQ8NAV1 MIR342-201ENST00000362212 99 ntBASIC1.49□□□□□ -2.17
PRPF38AQ8NAV1 RNU6-818P-201ENST00000364837 108 ntBASIC1.49□□□□□ -2.17
PRPF38AQ8NAV1 SNORD37.2-201ENST00000391075 66 ntBASIC1.49□□□□□ -2.17
PRPF38AQ8NAV1 MIR548I3-201ENST00000408378 149 ntBASIC1.49□□□□□ -2.17
PRPF38AQ8NAV1 Y_RNA.272-201ENST00000364696 102 ntBASIC1.48□□□□□ -2.17
PRPF38AQ8NAV1 RNU1-133P-201ENST00000364867 167 ntBASIC1.48□□□□□ -2.17
PRPF38AQ8NAV1 Y_RNA.330-201ENST00000365230 109 ntBASIC1.48□□□□□ -2.17
PRPF38AQ8NAV1 MT-TN-201ENST00000387400 73 ntBASIC1.48□□□□□ -2.17
PRPF38AQ8NAV1 MIR1302-7-201ENST00000408841 72 ntBASIC1.48□□□□□ -2.17
PRPF38AQ8NAV1 RNU5E-9P-201ENST00000411164 104 ntBASIC1.48□□□□□ -2.17
PRPF38AQ8NAV1 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.48□□□□□ -2.17
PRPF38AQ8NAV1 AP000753.3-201ENST00000604083 169 ntBASIC1.48□□□□□ -2.17
PRPF38AQ8NAV1 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
PRPF38AQ8NAV1 AC008163.1-202ENST00000636004 2889 ntBASIC1.48□□□□□ -2.17
PRPF38AQ8NAV1 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
PRPF38AQ8NAV1 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
PRPF38AQ8NAV1 SNORA1.1-201ENST00000364671 133 ntBASIC1.47□□□□□ -2.17
PRPF38AQ8NAV1 MIR758-201ENST00000390227 88 ntBASIC1.47□□□□□ -2.17
PRPF38AQ8NAV1 AC002429.1-201ENST00000437672 148 ntBASIC1.47□□□□□ -2.17
PRPF38AQ8NAV1 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.47□□□□□ -2.17
PRPF38AQ8NAV1 MIR376A2-201ENST00000636782 80 ntBASIC1.47□□□□□ -2.17
PRPF38AQ8NAV1 RNU1-124P-201ENST00000363861 145 ntBASIC1.46□□□□□ -2.18
PRPF38AQ8NAV1 RNU6-939P-201ENST00000384634 107 ntBASIC1.46□□□□□ -2.18
PRPF38AQ8NAV1 SNORD38B-201ENST00000384690 67 ntBASIC1.46□□□□□ -2.18
PRPF38AQ8NAV1 MIR19B1-201ENST00000384829 87 ntBASIC1.46□□□□□ -2.18
PRPF38AQ8NAV1 RNU6-613P-201ENST00000410412 108 ntBASIC1.46□□□□□ -2.18
PRPF38AQ8NAV1 RNU6-1149P-201ENST00000516810 97 ntBASIC1.46□□□□□ -2.18
PRPF38AQ8NAV1 MIR3152-201ENST00000579801 74 ntBASIC1.46□□□□□ -2.18
PRPF38AQ8NAV1 AC131055.1-201ENST00000584626 316 ntBASIC1.46□□□□□ -2.18
PRPF38AQ8NAV1 AL020996.3-201ENST00000606617 222 ntBASIC1.46□□□□□ -2.18
PRPF38AQ8NAV1 MIR6504-201ENST00000613520 61 ntBASIC1.46□□□□□ -2.18
PRPF38AQ8NAV1 AC091932.4-201ENST00000623386 200 ntBASIC1.46□□□□□ -2.18
PRPF38AQ8NAV1 SNORD38B-202ENST00000625943 69 ntBASIC1.46□□□□□ -2.18
PRPF38AQ8NAV1 Z97988.1-201ENST00000637697 135 ntBASIC1.46□□□□□ -2.18
PRPF38AQ8NAV1 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.46□□□□□ -2.18
PRPF38AQ8NAV1 Y_RNA.354-201ENST00000365448 111 ntBASIC1.45□□□□□ -2.18
PRPF38AQ8NAV1 Y_RNA.555-201ENST00000384673 110 ntBASIC1.45□□□□□ -2.18
PRPF38AQ8NAV1 MTATP6P21-201ENST00000440681 189 ntBASIC1.45□□□□□ -2.18
PRPF38AQ8NAV1 RNA5SP102-201ENST00000516865 106 ntBASIC1.45□□□□□ -2.18
PRPF38AQ8NAV1 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.45□□□□□ -2.18
PRPF38AQ8NAV1 MIR4264-201ENST00000583520 66 ntBASIC1.45□□□□□ -2.18
PRPF38AQ8NAV1 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.45□□□□□ -2.18
PRPF38AQ8NAV1 MIR8055-201ENST00000610739 97 ntBASIC1.45□□□□□ -2.18
PRPF38AQ8NAV1 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.45□□□□□ -2.18
PRPF38AQ8NAV1 MIR6516-201ENST00000630554 81 ntBASIC1.45□□□□□ -2.18
PRPF38AQ8NAV1 AL596211.1-201ENST00000569873 2277 ntBASIC1.45□□□□□ -2.18
PRPF38AQ8NAV1 MIR377-201ENST00000362145 69 ntBASIC1.44□□□□□ -2.18
PRPF38AQ8NAV1 RNU6-886P-201ENST00000384319 105 ntBASIC1.44□□□□□ -2.18
PRPF38AQ8NAV1 RNU6-913P-201ENST00000390913 95 ntBASIC1.44□□□□□ -2.18
PRPF38AQ8NAV1 RPS23P4-201ENST00000487908 423 ntBASIC1.44□□□□□ -2.18
PRPF38AQ8NAV1 SCARNA15-202ENST00000516881 127 ntBASIC1.44□□□□□ -2.18
PRPF38AQ8NAV1 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.44□□□□□ -2.18
PRPF38AQ8NAV1 RNU6-449P-201ENST00000383914 107 ntBASIC1.43□□□□□ -2.18
PRPF38AQ8NAV1 SNORA20-201ENST00000384662 132 ntBASIC1.43□□□□□ -2.18
PRPF38AQ8NAV1 MIR200A-201ENST00000384875 90 ntBASIC1.43□□□□□ -2.18
PRPF38AQ8NAV1 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 178.7 ms