Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 RNA5SP261-201ENST00000410536 106 ntBASIC0.3□□□□□ -2.36
CCDC89Q8N998 RNU7-45P-201ENST00000459460 63 ntBASIC0.3□□□□□ -2.36
CCDC89Q8N998 AC108740.1-201ENST00000498629 225 ntBASIC0.3□□□□□ -2.36
CCDC89Q8N998 RNA5SP94-201ENST00000516917 108 ntBASIC0.3□□□□□ -2.36
CCDC89Q8N998 AL078603.1-201ENST00000603824 313 ntBASIC0.3□□□□□ -2.36
CCDC89Q8N998 MIR6513-201ENST00000621188 64 ntBASIC0.3□□□□□ -2.36
CCDC89Q8N998 AL160413.1-201ENST00000622780 310 ntBASIC0.3□□□□□ -2.36
CCDC89Q8N998 SNORD44.1-201ENST00000363202 61 ntBASIC0.29□□□□□ -2.36
CCDC89Q8N998 Y_RNA.117-201ENST00000363294 101 ntBASIC0.29□□□□□ -2.36
CCDC89Q8N998 RNY3P5-201ENST00000384127 102 ntBASIC0.29□□□□□ -2.36
CCDC89Q8N998 MTATP6P23-201ENST00000440153 476 ntBASIC0.29□□□□□ -2.36
CCDC89Q8N998 RNA5SP153-201ENST00000516498 76 ntBASIC0.29□□□□□ -2.36
CCDC89Q8N998 RNU6-448P-201ENST00000517052 107 ntBASIC0.29□□□□□ -2.36
CCDC89Q8N998 AC113195.1-201ENST00000579952 141 ntBASIC0.29□□□□□ -2.36
CCDC89Q8N998 SNORA25.18-201ENST00000607153 114 ntBASIC0.29□□□□□ -2.36
CCDC89Q8N998 MIR302B-201ENST00000362188 73 ntBASIC0.28□□□□□ -2.36
CCDC89Q8N998 MIR30D-201ENST00000362283 70 ntBASIC0.28□□□□□ -2.36
CCDC89Q8N998 Y_RNA.158-201ENST00000363651 101 ntBASIC0.28□□□□□ -2.36
CCDC89Q8N998 Y_RNA.634-201ENST00000364811 113 ntBASIC0.28□□□□□ -2.36
CCDC89Q8N998 Y_RNA.440-201ENST00000384120 114 ntBASIC0.28□□□□□ -2.36
CCDC89Q8N998 Y_RNA.622-201ENST00000411091 108 ntBASIC0.28□□□□□ -2.36
CCDC89Q8N998 RNA5SP247-201ENST00000411181 105 ntBASIC0.28□□□□□ -2.36
CCDC89Q8N998 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.28□□□□□ -2.36
CCDC89Q8N998 SERF1AP1-201ENST00000514575 187 ntBASIC0.28□□□□□ -2.36
CCDC89Q8N998 Y_RNA.84-201ENST00000363011 104 ntBASIC0.27□□□□□ -2.37
CCDC89Q8N998 RNU6-1289P-201ENST00000384431 106 ntBASIC0.27□□□□□ -2.37
CCDC89Q8N998 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.27□□□□□ -2.37
CCDC89Q8N998 RNU6-1223P-201ENST00000517124 104 ntBASIC0.27□□□□□ -2.37
CCDC89Q8N998 MIR3678-201ENST00000578455 94 ntBASIC0.27□□□□□ -2.37
CCDC89Q8N998 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.27□□□□□ -2.37
CCDC89Q8N998 RNU1-133P-201ENST00000364867 167 ntBASIC0.26□□□□□ -2.37
CCDC89Q8N998 RNU6-597P-201ENST00000365620 102 ntBASIC0.26□□□□□ -2.37
CCDC89Q8N998 RNU6-484P-201ENST00000384016 107 ntBASIC0.26□□□□□ -2.37
CCDC89Q8N998 Y_RNA.432-201ENST00000384087 111 ntBASIC0.26□□□□□ -2.37
CCDC89Q8N998 Y_RNA.460-201ENST00000384255 102 ntBASIC0.26□□□□□ -2.37
CCDC89Q8N998 RNU6-1228P-201ENST00000391014 107 ntBASIC0.26□□□□□ -2.37
CCDC89Q8N998 SNRPGP12-201ENST00000449481 213 ntBASIC0.26□□□□□ -2.37
CCDC89Q8N998 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.26□□□□□ -2.37
CCDC89Q8N998 MIR376A2-201ENST00000636782 80 ntBASIC0.26□□□□□ -2.37
CCDC89Q8N998 Y_RNA.153-201ENST00000363615 91 ntBASIC0.25□□□□□ -2.37
CCDC89Q8N998 Y_RNA.304-201ENST00000365011 112 ntBASIC0.25□□□□□ -2.37
CCDC89Q8N998 VTRNA1-3-201ENST00000365645 89 ntBASIC0.25□□□□□ -2.37
CCDC89Q8N998 SNORA1-201ENST00000384107 130 ntBASIC0.25□□□□□ -2.37
CCDC89Q8N998 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.25□□□□□ -2.37
CCDC89Q8N998 SNORD93-201ENST00000408813 74 ntBASIC0.25□□□□□ -2.37
CCDC89Q8N998 RNU6-651P-201ENST00000411040 105 ntBASIC0.25□□□□□ -2.37
CCDC89Q8N998 AC113618.1-201ENST00000416747 285 ntBASIC0.25□□□□□ -2.37
CCDC89Q8N998 RNU6-1338P-201ENST00000516328 91 ntBASIC0.25□□□□□ -2.37
CCDC89Q8N998 RNU6-453P-201ENST00000516819 85 ntBASIC0.25□□□□□ -2.37
CCDC89Q8N998 Y_RNA.711-201ENST00000516993 102 ntBASIC0.25□□□□□ -2.37
CCDC89Q8N998 RNU6-570P-201ENST00000517051 105 ntBASIC0.25□□□□□ -2.37
CCDC89Q8N998 RNU6-1137P-201ENST00000517073 99 ntBASIC0.25□□□□□ -2.37
CCDC89Q8N998 MIR4711-201ENST00000578274 70 ntBASIC0.25□□□□□ -2.37
CCDC89Q8N998 AP001282.2-201ENST00000616149 309 ntBASIC0.25□□□□□ -2.37
CCDC89Q8N998 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.25□□□□□ -2.37
CCDC89Q8N998 MIR6717-201ENST00000622747 73 ntBASIC0.25□□□□□ -2.37
CCDC89Q8N998 AC134503.1-201ENST00000633048 54 ntBASIC0.25□□□□□ -2.37
CCDC89Q8N998 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
CCDC89Q8N998 SNORD118-201ENST00000363593 134 ntBASIC0.24□□□□□ -2.37
CCDC89Q8N998 Y_RNA.224-201ENST00000364308 111 ntBASIC0.24□□□□□ -2.37
CCDC89Q8N998 MIR499A-201ENST00000384903 122 ntBASIC0.24□□□□□ -2.37
CCDC89Q8N998 SNORA26.6-201ENST00000391256 115 ntBASIC0.24□□□□□ -2.37
CCDC89Q8N998 Y_RNA.617-201ENST00000410920 90 ntBASIC0.24□□□□□ -2.37
CCDC89Q8N998 RPL39P25-201ENST00000449384 154 ntBASIC0.24□□□□□ -2.37
CCDC89Q8N998 SNRPGP8-201ENST00000454064 226 ntBASIC0.24□□□□□ -2.37
CCDC89Q8N998 RNU6-863P-201ENST00000515989 104 ntBASIC0.24□□□□□ -2.37
CCDC89Q8N998 MIR4680-201ENST00000580906 66 ntBASIC0.24□□□□□ -2.37
CCDC89Q8N998 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.24□□□□□ -2.37
CCDC89Q8N998 RNU6-349P-201ENST00000362402 107 ntBASIC0.23□□□□□ -2.37
CCDC89Q8N998 RNA5SP62-201ENST00000363457 110 ntBASIC0.23□□□□□ -2.37
CCDC89Q8N998 snoU2_19.4-201ENST00000364329 80 ntBASIC0.23□□□□□ -2.37
CCDC89Q8N998 Y_RNA.275-201ENST00000364726 110 ntBASIC0.23□□□□□ -2.37
CCDC89Q8N998 RNU6-740P-201ENST00000364734 105 ntBASIC0.23□□□□□ -2.37
CCDC89Q8N998 Y_RNA.351-201ENST00000365436 96 ntBASIC0.23□□□□□ -2.37
CCDC89Q8N998 MIR548P-201ENST00000408336 84 ntBASIC0.23□□□□□ -2.37
CCDC89Q8N998 AL117351.2-201ENST00000513571 157 ntBASIC0.23□□□□□ -2.37
CCDC89Q8N998 AC133485.4-201ENST00000561835 220 ntBASIC0.23□□□□□ -2.37
CCDC89Q8N998 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.23□□□□□ -2.37
CCDC89Q8N998 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
CCDC89Q8N998 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.23□□□□□ -2.37
CCDC89Q8N998 Y_RNA.23-201ENST00000362496 106 ntBASIC0.22□□□□□ -2.37
CCDC89Q8N998 SNORA8.2-201ENST00000384372 139 ntBASIC0.22□□□□□ -2.37
CCDC89Q8N998 Y_RNA.567-201ENST00000384736 106 ntBASIC0.22□□□□□ -2.37
CCDC89Q8N998 RNU7-80P-201ENST00000459562 61 ntBASIC0.22□□□□□ -2.37
CCDC89Q8N998 AC097639.2-201ENST00000603159 172 ntBASIC0.22□□□□□ -2.37
CCDC89Q8N998 RNU6-653P-201ENST00000363074 106 ntBASIC0.21□□□□□ -2.38
CCDC89Q8N998 MIR936-201ENST00000401264 98 ntBASIC0.21□□□□□ -2.38
CCDC89Q8N998 RNA5SP237-201ENST00000410414 113 ntBASIC0.21□□□□□ -2.38
CCDC89Q8N998 RNU6-1203P-201ENST00000410703 110 ntBASIC0.21□□□□□ -2.38
CCDC89Q8N998 RNU4-83P-201ENST00000410863 133 ntBASIC0.21□□□□□ -2.38
CCDC89Q8N998 RNU6-469P-201ENST00000516253 101 ntBASIC0.21□□□□□ -2.38
CCDC89Q8N998 RNA5SP220-201ENST00000516298 104 ntBASIC0.21□□□□□ -2.38
CCDC89Q8N998 MIR3152-201ENST00000579801 74 ntBASIC0.21□□□□□ -2.38
CCDC89Q8N998 MIR3171-201ENST00000584270 74 ntBASIC0.21□□□□□ -2.38
CCDC89Q8N998 SNORA4-201ENST00000584302 138 ntBASIC0.21□□□□□ -2.38
CCDC89Q8N998 MIR6734-201ENST00000621166 68 ntBASIC0.21□□□□□ -2.38
CCDC89Q8N998 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
CCDC89Q8N998 RNU6-1099P-201ENST00000363533 107 ntBASIC0.2□□□□□ -2.38
CCDC89Q8N998 Y_RNA.454-201ENST00000384224 113 ntBASIC0.2□□□□□ -2.38
CCDC89Q8N998 MIR644A-201ENST00000385262 94 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 195.9 ms