Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 Y_RNA.662-201ENST00000516028 97 ntBASIC1.37□□□□□ -2.19
CCDC33Q8N5R6 RNU11-2P-201ENST00000516898 142 ntBASIC1.37□□□□□ -2.19
CCDC33Q8N5R6 RNU6-182P-201ENST00000516970 105 ntBASIC1.37□□□□□ -2.19
CCDC33Q8N5R6 AC068338.1-201ENST00000565567 176 ntBASIC1.37□□□□□ -2.19
CCDC33Q8N5R6 MIR548AO-201ENST00000579992 96 ntBASIC1.37□□□□□ -2.19
CCDC33Q8N5R6 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.36□□□□□ -2.19
CCDC33Q8N5R6 RNU4-84P-201ENST00000364200 139 ntBASIC1.36□□□□□ -2.19
CCDC33Q8N5R6 SNORA25.7-201ENST00000364375 127 ntBASIC1.36□□□□□ -2.19
CCDC33Q8N5R6 RNU6-939P-201ENST00000384634 107 ntBASIC1.36□□□□□ -2.19
CCDC33Q8N5R6 MIR489-201ENST00000384923 84 ntBASIC1.36□□□□□ -2.19
CCDC33Q8N5R6 RNU2-64P-201ENST00000411315 191 ntBASIC1.36□□□□□ -2.19
CCDC33Q8N5R6 RNU7-67P-201ENST00000459003 62 ntBASIC1.36□□□□□ -2.19
CCDC33Q8N5R6 RNU7-21P-201ENST00000459430 62 ntBASIC1.36□□□□□ -2.19
CCDC33Q8N5R6 MIR4452-201ENST00000583004 71 ntBASIC1.36□□□□□ -2.19
CCDC33Q8N5R6 SNORA25.8-201ENST00000364831 128 ntBASIC1.35□□□□□ -2.19
CCDC33Q8N5R6 Y_RNA.337-201ENST00000365312 102 ntBASIC1.35□□□□□ -2.19
CCDC33Q8N5R6 SNORD114-22-201ENST00000365423 72 ntBASIC1.35□□□□□ -2.19
CCDC33Q8N5R6 Y_RNA.521-201ENST00000384560 114 ntBASIC1.35□□□□□ -2.19
CCDC33Q8N5R6 RNU6-768P-201ENST00000384683 107 ntBASIC1.35□□□□□ -2.19
CCDC33Q8N5R6 MIR618-201ENST00000385287 98 ntBASIC1.35□□□□□ -2.19
CCDC33Q8N5R6 RNU6-239P-201ENST00000390990 99 ntBASIC1.35□□□□□ -2.19
CCDC33Q8N5R6 AL591704.2-201ENST00000421658 181 ntBASIC1.35□□□□□ -2.19
CCDC33Q8N5R6 AL035398.1-201ENST00000430869 322 ntBASIC1.35□□□□□ -2.19
CCDC33Q8N5R6 RNU7-121P-201ENST00000516604 62 ntBASIC1.35□□□□□ -2.19
CCDC33Q8N5R6 RNU7-53P-201ENST00000516705 60 ntBASIC1.35□□□□□ -2.19
CCDC33Q8N5R6 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.35□□□□□ -2.19
CCDC33Q8N5R6 SNORA4-201ENST00000584302 138 ntBASIC1.35□□□□□ -2.19
CCDC33Q8N5R6 SEPT14P17-201ENST00000617978 177 ntBASIC1.35□□□□□ -2.19
CCDC33Q8N5R6 Y_RNA.357-201ENST00000365487 109 ntBASIC1.34□□□□□ -2.19
CCDC33Q8N5R6 MIR222-201ENST00000384992 110 ntBASIC1.34□□□□□ -2.19
CCDC33Q8N5R6 RNU6-958P-201ENST00000516995 106 ntBASIC1.34□□□□□ -2.19
CCDC33Q8N5R6 FTX_2.1-201ENST00000618816 94 ntBASIC1.34□□□□□ -2.19
CCDC33Q8N5R6 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.2
CCDC33Q8N5R6 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.34□□□□□ -2.2
CCDC33Q8N5R6 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CCDC33Q8N5R6 RNU6-913P-201ENST00000390913 95 ntBASIC1.33□□□□□ -2.2
CCDC33Q8N5R6 RNU6-1135P-201ENST00000411083 103 ntBASIC1.33□□□□□ -2.2
CCDC33Q8N5R6 snoU13.18-201ENST00000459483 104 ntBASIC1.33□□□□□ -2.2
CCDC33Q8N5R6 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.33□□□□□ -2.2
CCDC33Q8N5R6 MIR96-201ENST00000362288 78 ntBASIC1.32□□□□□ -2.2
CCDC33Q8N5R6 MIR19B1-201ENST00000384829 87 ntBASIC1.32□□□□□ -2.2
CCDC33Q8N5R6 AC063976.4-201ENST00000421971 163 ntBASIC1.32□□□□□ -2.2
CCDC33Q8N5R6 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.32□□□□□ -2.2
CCDC33Q8N5R6 AC074198.2-201ENST00000508153 258 ntBASIC1.32□□□□□ -2.2
CCDC33Q8N5R6 MIR2115-201ENST00000516657 100 ntBASIC1.32□□□□□ -2.2
CCDC33Q8N5R6 SCARNA15-202ENST00000516881 127 ntBASIC1.32□□□□□ -2.2
CCDC33Q8N5R6 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.32□□□□□ -2.2
CCDC33Q8N5R6 MIR6516-201ENST00000630554 81 ntBASIC1.32□□□□□ -2.2
CCDC33Q8N5R6 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
CCDC33Q8N5R6 Y_RNA.351-201ENST00000365436 96 ntBASIC1.31□□□□□ -2.2
CCDC33Q8N5R6 SNORA40.6-201ENST00000391153 128 ntBASIC1.31□□□□□ -2.2
CCDC33Q8N5R6 MIR548I3-201ENST00000408378 149 ntBASIC1.31□□□□□ -2.2
CCDC33Q8N5R6 RNU6-613P-201ENST00000410412 108 ntBASIC1.31□□□□□ -2.2
CCDC33Q8N5R6 RNU2-11P-201ENST00000459191 187 ntBASIC1.31□□□□□ -2.2
CCDC33Q8N5R6 RNU7-90P-201ENST00000459216 62 ntBASIC1.31□□□□□ -2.2
CCDC33Q8N5R6 RNU7-80P-201ENST00000459562 61 ntBASIC1.31□□□□□ -2.2
CCDC33Q8N5R6 RPS23P4-201ENST00000487908 423 ntBASIC1.31□□□□□ -2.2
CCDC33Q8N5R6 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.31□□□□□ -2.2
CCDC33Q8N5R6 RNA5SP404-201ENST00000517118 132 ntBASIC1.31□□□□□ -2.2
CCDC33Q8N5R6 MIR3646-201ENST00000578301 84 ntBASIC1.31□□□□□ -2.2
CCDC33Q8N5R6 AL078603.1-201ENST00000603824 313 ntBASIC1.31□□□□□ -2.2
CCDC33Q8N5R6 AL020996.3-201ENST00000606617 222 ntBASIC1.31□□□□□ -2.2
CCDC33Q8N5R6 SNORD114-27-201ENST00000363766 70 ntBASIC1.3□□□□□ -2.2
CCDC33Q8N5R6 RNU1-124P-201ENST00000363861 145 ntBASIC1.3□□□□□ -2.2
CCDC33Q8N5R6 RNU6-1336P-201ENST00000383886 109 ntBASIC1.3□□□□□ -2.2
CCDC33Q8N5R6 SNORA75.5-201ENST00000391291 81 ntBASIC1.3□□□□□ -2.2
CCDC33Q8N5R6 AC002429.1-201ENST00000437672 148 ntBASIC1.3□□□□□ -2.2
CCDC33Q8N5R6 MIR3660-201ENST00000584845 100 ntBASIC1.3□□□□□ -2.2
CCDC33Q8N5R6 AC098479.1-201ENST00000609225 154 ntBASIC1.3□□□□□ -2.2
CCDC33Q8N5R6 MIR8055-201ENST00000610739 97 ntBASIC1.3□□□□□ -2.2
CCDC33Q8N5R6 AC091932.4-201ENST00000623386 200 ntBASIC1.3□□□□□ -2.2
CCDC33Q8N5R6 Z97988.1-201ENST00000637697 135 ntBASIC1.3□□□□□ -2.2
CCDC33Q8N5R6 AC008163.1-202ENST00000636004 2889 ntBASIC1.29□□□□□ -2.2
CCDC33Q8N5R6 RNU6-1082P-201ENST00000364574 107 ntBASIC1.29□□□□□ -2.2
CCDC33Q8N5R6 Y_RNA.272-201ENST00000364696 102 ntBASIC1.29□□□□□ -2.2
CCDC33Q8N5R6 RNU6-396P-201ENST00000365369 105 ntBASIC1.29□□□□□ -2.2
CCDC33Q8N5R6 Y_RNA.454-201ENST00000384224 113 ntBASIC1.29□□□□□ -2.2
CCDC33Q8N5R6 MT-TN-201ENST00000387400 73 ntBASIC1.29□□□□□ -2.2
CCDC33Q8N5R6 PCNPP3-201ENST00000393579 471 ntBASIC1.29□□□□□ -2.2
CCDC33Q8N5R6 DNAJC19P2-201ENST00000593340 302 ntBASIC1.29□□□□□ -2.2
CCDC33Q8N5R6 RNU6-654P-201ENST00000364373 107 ntBASIC1.28□□□□□ -2.2
CCDC33Q8N5R6 AC090844.1-201ENST00000422019 156 ntBASIC1.28□□□□□ -2.2
CCDC33Q8N5R6 RNU6-1149P-201ENST00000516810 97 ntBASIC1.28□□□□□ -2.2
CCDC33Q8N5R6 MIR6734-201ENST00000621166 68 ntBASIC1.28□□□□□ -2.2
CCDC33Q8N5R6 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
CCDC33Q8N5R6 MIR377-201ENST00000362145 69 ntBASIC1.27□□□□□ -2.21
CCDC33Q8N5R6 Y_RNA.52-201ENST00000362760 96 ntBASIC1.27□□□□□ -2.21
CCDC33Q8N5R6 Y_RNA.330-201ENST00000365230 109 ntBASIC1.27□□□□□ -2.21
CCDC33Q8N5R6 RNU6-42P-201ENST00000384165 107 ntBASIC1.27□□□□□ -2.21
CCDC33Q8N5R6 RNU6-886P-201ENST00000384319 105 ntBASIC1.27□□□□□ -2.21
CCDC33Q8N5R6 RNU6-125P-201ENST00000384505 107 ntBASIC1.27□□□□□ -2.21
CCDC33Q8N5R6 RNU7-40P-201ENST00000516397 64 ntBASIC1.27□□□□□ -2.21
CCDC33Q8N5R6 MIR3658-201ENST00000636291 56 ntBASIC1.27□□□□□ -2.21
CCDC33Q8N5R6 MIR6844-201ENST00000637122 62 ntBASIC1.27□□□□□ -2.21
CCDC33Q8N5R6 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
CCDC33Q8N5R6 MIR342-201ENST00000362212 99 ntBASIC1.26□□□□□ -2.21
CCDC33Q8N5R6 Y_RNA.270-201ENST00000364693 104 ntBASIC1.26□□□□□ -2.21
CCDC33Q8N5R6 RNU6-818P-201ENST00000364837 108 ntBASIC1.26□□□□□ -2.21
CCDC33Q8N5R6 Y_RNA.555-201ENST00000384673 110 ntBASIC1.26□□□□□ -2.21
CCDC33Q8N5R6 MRPL35P3-201ENST00000421557 364 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 227.4 ms