Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 RNU6-679P-201ENST00000391003 106 ntBASIC0.22□□□□□ -2.37
ZNF546Q86UE3 MIR936-201ENST00000401264 98 ntBASIC0.22□□□□□ -2.37
ZNF546Q86UE3 SNORA40.8-201ENST00000411034 126 ntBASIC0.22□□□□□ -2.37
ZNF546Q86UE3 RNU2-55P-201ENST00000411146 174 ntBASIC0.22□□□□□ -2.37
ZNF546Q86UE3 SNORD71-201ENST00000411292 86 ntBASIC0.22□□□□□ -2.37
ZNF546Q86UE3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.22□□□□□ -2.37
ZNF546Q86UE3 AC108740.1-201ENST00000498629 225 ntBASIC0.22□□□□□ -2.37
ZNF546Q86UE3 SERF1AP1-201ENST00000514575 187 ntBASIC0.22□□□□□ -2.37
ZNF546Q86UE3 RNU6-1143P-201ENST00000516125 104 ntBASIC0.22□□□□□ -2.37
ZNF546Q86UE3 Y_RNA.711-201ENST00000516993 102 ntBASIC0.22□□□□□ -2.37
ZNF546Q86UE3 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.22□□□□□ -2.37
ZNF546Q86UE3 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.22□□□□□ -2.37
ZNF546Q86UE3 AC097639.2-201ENST00000603159 172 ntBASIC0.22□□□□□ -2.37
ZNF546Q86UE3 MIR103A1-201ENST00000362165 78 ntBASIC0.21□□□□□ -2.38
ZNF546Q86UE3 Y_RNA.7-201ENST00000362352 102 ntBASIC0.21□□□□□ -2.38
ZNF546Q86UE3 Y_RNA.84-201ENST00000363011 104 ntBASIC0.21□□□□□ -2.38
ZNF546Q86UE3 Y_RNA.128-201ENST00000363391 112 ntBASIC0.21□□□□□ -2.38
ZNF546Q86UE3 Y_RNA.275-201ENST00000364726 110 ntBASIC0.21□□□□□ -2.38
ZNF546Q86UE3 Y_RNA.634-201ENST00000364811 113 ntBASIC0.21□□□□□ -2.38
ZNF546Q86UE3 VTRNA1-3-201ENST00000365645 89 ntBASIC0.21□□□□□ -2.38
ZNF546Q86UE3 RNU6-1189P-201ENST00000383958 107 ntBASIC0.21□□□□□ -2.38
ZNF546Q86UE3 Y_RNA.460-201ENST00000384255 102 ntBASIC0.21□□□□□ -2.38
ZNF546Q86UE3 Y_RNA.527-201ENST00000384573 102 ntBASIC0.21□□□□□ -2.38
ZNF546Q86UE3 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.21□□□□□ -2.38
ZNF546Q86UE3 snoU13.18-201ENST00000459483 104 ntBASIC0.21□□□□□ -2.38
ZNF546Q86UE3 SNORA25.12-201ENST00000516202 82 ntBASIC0.21□□□□□ -2.38
ZNF546Q86UE3 RNU6-1299P-201ENST00000516316 100 ntBASIC0.21□□□□□ -2.38
ZNF546Q86UE3 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.21□□□□□ -2.38
ZNF546Q86UE3 MIR4711-201ENST00000578274 70 ntBASIC0.21□□□□□ -2.38
ZNF546Q86UE3 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
ZNF546Q86UE3 AC022709.1-201ENST00000615967 87 ntBASIC0.21□□□□□ -2.38
ZNF546Q86UE3 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.21□□□□□ -2.38
ZNF546Q86UE3 AC134503.1-201ENST00000633048 54 ntBASIC0.21□□□□□ -2.38
ZNF546Q86UE3 Y_RNA.64-201ENST00000362845 102 ntBASIC0.2□□□□□ -2.38
ZNF546Q86UE3 Y_RNA.432-201ENST00000384087 111 ntBASIC0.2□□□□□ -2.38
ZNF546Q86UE3 RNU6-1289P-201ENST00000384431 106 ntBASIC0.2□□□□□ -2.38
ZNF546Q86UE3 SNORA26.6-201ENST00000391256 115 ntBASIC0.2□□□□□ -2.38
ZNF546Q86UE3 MIR548P-201ENST00000408336 84 ntBASIC0.2□□□□□ -2.38
ZNF546Q86UE3 RNU2-70P-201ENST00000410718 179 ntBASIC0.2□□□□□ -2.38
ZNF546Q86UE3 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.2□□□□□ -2.38
ZNF546Q86UE3 MTND5P22-201ENST00000458380 195 ntBASIC0.2□□□□□ -2.38
ZNF546Q86UE3 RNA5SP153-201ENST00000516498 76 ntBASIC0.2□□□□□ -2.38
ZNF546Q86UE3 AC022523.2-201ENST00000561045 150 ntBASIC0.2□□□□□ -2.38
ZNF546Q86UE3 MIR4680-201ENST00000580906 66 ntBASIC0.2□□□□□ -2.38
ZNF546Q86UE3 SNORA25.18-201ENST00000607153 114 ntBASIC0.2□□□□□ -2.38
ZNF546Q86UE3 uc_338.16-201ENST00000621804 95 ntBASIC0.2□□□□□ -2.38
ZNF546Q86UE3 AL589743.1-201ENST00000551932 2712 ntBASIC0.19□□□□□ -2.38
ZNF546Q86UE3 SNORD44.1-201ENST00000363202 61 ntBASIC0.19□□□□□ -2.38
ZNF546Q86UE3 Y_RNA.138-201ENST00000363462 102 ntBASIC0.19□□□□□ -2.38
ZNF546Q86UE3 Y_RNA.354-201ENST00000365448 111 ntBASIC0.19□□□□□ -2.38
ZNF546Q86UE3 RNY3P5-201ENST00000384127 102 ntBASIC0.19□□□□□ -2.38
ZNF546Q86UE3 SNRPGP12-201ENST00000449481 213 ntBASIC0.19□□□□□ -2.38
ZNF546Q86UE3 RNU6-1338P-201ENST00000516328 91 ntBASIC0.19□□□□□ -2.38
ZNF546Q86UE3 RNU6-448P-201ENST00000517052 107 ntBASIC0.19□□□□□ -2.38
ZNF546Q86UE3 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.19□□□□□ -2.38
ZNF546Q86UE3 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.19□□□□□ -2.38
ZNF546Q86UE3 Y_RNA.152-201ENST00000363578 100 ntBASIC0.18□□□□□ -2.38
ZNF546Q86UE3 Y_RNA.153-201ENST00000363615 91 ntBASIC0.18□□□□□ -2.38
ZNF546Q86UE3 SNORA8.2-201ENST00000384372 139 ntBASIC0.18□□□□□ -2.38
ZNF546Q86UE3 MIR598-201ENST00000384868 97 ntBASIC0.18□□□□□ -2.38
ZNF546Q86UE3 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.18□□□□□ -2.38
ZNF546Q86UE3 SCARNA24.2-201ENST00000516968 130 ntBASIC0.18□□□□□ -2.38
ZNF546Q86UE3 MIR3678-201ENST00000578455 94 ntBASIC0.18□□□□□ -2.38
ZNF546Q86UE3 MIR4431-201ENST00000579990 94 ntBASIC0.18□□□□□ -2.38
ZNF546Q86UE3 MIR6717-201ENST00000622747 73 ntBASIC0.18□□□□□ -2.38
ZNF546Q86UE3 MIR376A2-201ENST00000636782 80 ntBASIC0.18□□□□□ -2.38
ZNF546Q86UE3 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
ZNF546Q86UE3 MIR342-201ENST00000362212 99 ntBASIC0.17□□□□□ -2.38
ZNF546Q86UE3 Y_RNA.42-201ENST00000362660 108 ntBASIC0.17□□□□□ -2.38
ZNF546Q86UE3 RNU6-653P-201ENST00000363074 106 ntBASIC0.17□□□□□ -2.38
ZNF546Q86UE3 Y_RNA.117-201ENST00000363294 101 ntBASIC0.17□□□□□ -2.38
ZNF546Q86UE3 SNORD114-23-201ENST00000363536 72 ntBASIC0.17□□□□□ -2.38
ZNF546Q86UE3 SNORD118-201ENST00000363593 134 ntBASIC0.17□□□□□ -2.38
ZNF546Q86UE3 Y_RNA.304-201ENST00000365011 112 ntBASIC0.17□□□□□ -2.38
ZNF546Q86UE3 RNA5SP117-201ENST00000365294 118 ntBASIC0.17□□□□□ -2.38
ZNF546Q86UE3 RNU6-1203P-201ENST00000410703 110 ntBASIC0.17□□□□□ -2.38
ZNF546Q86UE3 AP001282.2-201ENST00000616149 309 ntBASIC0.17□□□□□ -2.38
ZNF546Q86UE3 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.17□□□□□ -2.38
ZNF546Q86UE3 MIR8066-201ENST00000617280 78 ntBASIC0.17□□□□□ -2.38
ZNF546Q86UE3 MIR302B-201ENST00000362188 73 ntBASIC0.16□□□□□ -2.38
ZNF546Q86UE3 Y_RNA.216-201ENST00000364205 93 ntBASIC0.16□□□□□ -2.38
ZNF546Q86UE3 SNORA1-201ENST00000384107 130 ntBASIC0.16□□□□□ -2.38
ZNF546Q86UE3 Y_RNA.535-201ENST00000384612 99 ntBASIC0.16□□□□□ -2.38
ZNF546Q86UE3 Y_RNA.567-201ENST00000384736 106 ntBASIC0.16□□□□□ -2.38
ZNF546Q86UE3 MT-TT-201ENST00000387460 66 ntBASIC0.16□□□□□ -2.38
ZNF546Q86UE3 RNA5SP261-201ENST00000410536 106 ntBASIC0.16□□□□□ -2.38
ZNF546Q86UE3 Y_RNA.622-201ENST00000411091 108 ntBASIC0.16□□□□□ -2.38
ZNF546Q86UE3 AC113618.1-201ENST00000416747 285 ntBASIC0.16□□□□□ -2.38
ZNF546Q86UE3 MTND4LP11-201ENST00000422184 280 ntBASIC0.16□□□□□ -2.38
ZNF546Q86UE3 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.16□□□□□ -2.38
ZNF546Q86UE3 SNORD2.1-201ENST00000458762 69 ntBASIC0.16□□□□□ -2.38
ZNF546Q86UE3 RNU7-45P-201ENST00000459460 63 ntBASIC0.16□□□□□ -2.38
ZNF546Q86UE3 AL117351.2-201ENST00000513571 157 ntBASIC0.16□□□□□ -2.38
ZNF546Q86UE3 AP003327.1-201ENST00000529684 127 ntBASIC0.16□□□□□ -2.38
ZNF546Q86UE3 AC133485.4-201ENST00000561835 220 ntBASIC0.16□□□□□ -2.38
ZNF546Q86UE3 AL662814.1-201ENST00000617364 121 ntBASIC0.16□□□□□ -2.38
ZNF546Q86UE3 RNU6-349P-201ENST00000362402 107 ntBASIC0.15□□□□□ -2.39
ZNF546Q86UE3 Y_RNA.23-201ENST00000362496 106 ntBASIC0.15□□□□□ -2.39
ZNF546Q86UE3 Y_RNA.44-201ENST00000362676 108 ntBASIC0.15□□□□□ -2.39
ZNF546Q86UE3 RNA5SP62-201ENST00000363457 110 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 235.5 ms