Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 RNA5SP127-201ENST00000411051 133 ntBASIC0.89□□□□□ -2.27
NPHP3Q7Z494 AF228730.3-201ENST00000436691 102 ntBASIC0.89□□□□□ -2.27
NPHP3Q7Z494 SNORA18.4-201ENST00000516440 124 ntBASIC0.89□□□□□ -2.27
NPHP3Q7Z494 RNU6-504P-201ENST00000516568 104 ntBASIC0.89□□□□□ -2.27
NPHP3Q7Z494 SNORD36C-201ENST00000516733 66 ntBASIC0.89□□□□□ -2.27
NPHP3Q7Z494 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.89□□□□□ -2.27
NPHP3Q7Z494 AC131055.1-201ENST00000584626 316 ntBASIC0.89□□□□□ -2.27
NPHP3Q7Z494 AC062037.2-201ENST00000610137 73 ntBASIC0.89□□□□□ -2.27
NPHP3Q7Z494 RNU6-888P-201ENST00000363010 101 ntBASIC0.88□□□□□ -2.27
NPHP3Q7Z494 RNU1-36P-201ENST00000365130 165 ntBASIC0.88□□□□□ -2.27
NPHP3Q7Z494 Y_RNA.350-201ENST00000365409 98 ntBASIC0.88□□□□□ -2.27
NPHP3Q7Z494 RNY3P5-201ENST00000384127 102 ntBASIC0.88□□□□□ -2.27
NPHP3Q7Z494 RNU2-55P-201ENST00000411146 174 ntBASIC0.88□□□□□ -2.27
NPHP3Q7Z494 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.88□□□□□ -2.27
NPHP3Q7Z494 RNU6-958P-201ENST00000516995 106 ntBASIC0.88□□□□□ -2.27
NPHP3Q7Z494 AP003484.1-201ENST00000530974 250 ntBASIC0.88□□□□□ -2.27
NPHP3Q7Z494 U4.1-201ENST00000620349 87 ntBASIC0.88□□□□□ -2.27
NPHP3Q7Z494 Y_RNA.193-201ENST00000363979 102 ntBASIC0.87□□□□□ -2.27
NPHP3Q7Z494 RNA5SP499-201ENST00000363982 119 ntBASIC0.87□□□□□ -2.27
NPHP3Q7Z494 RNY4P28-201ENST00000365281 93 ntBASIC0.87□□□□□ -2.27
NPHP3Q7Z494 RNU6-196P-201ENST00000384315 107 ntBASIC0.87□□□□□ -2.27
NPHP3Q7Z494 RNU6-493P-201ENST00000391321 108 ntBASIC0.87□□□□□ -2.27
NPHP3Q7Z494 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.87□□□□□ -2.27
NPHP3Q7Z494 RNU7-67P-201ENST00000459003 62 ntBASIC0.87□□□□□ -2.27
NPHP3Q7Z494 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.87□□□□□ -2.27
NPHP3Q7Z494 AC036111.3-201ENST00000526389 112 ntBASIC0.87□□□□□ -2.27
NPHP3Q7Z494 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.87□□□□□ -2.27
NPHP3Q7Z494 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.86□□□□□ -2.27
NPHP3Q7Z494 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
NPHP3Q7Z494 SNORD115-34-201ENST00000362441 82 ntBASIC0.86□□□□□ -2.27
NPHP3Q7Z494 Y_RNA.23-201ENST00000362496 106 ntBASIC0.86□□□□□ -2.27
NPHP3Q7Z494 SNORD115-12-201ENST00000362583 82 ntBASIC0.86□□□□□ -2.27
NPHP3Q7Z494 Y_RNA.60-201ENST00000362831 98 ntBASIC0.86□□□□□ -2.27
NPHP3Q7Z494 SNORD115-29-201ENST00000362834 82 ntBASIC0.86□□□□□ -2.27
NPHP3Q7Z494 SNORD115-9-201ENST00000362912 82 ntBASIC0.86□□□□□ -2.27
NPHP3Q7Z494 SNORD115-21-201ENST00000362963 81 ntBASIC0.86□□□□□ -2.27
NPHP3Q7Z494 SNORD115-14-201ENST00000363090 81 ntBASIC0.86□□□□□ -2.27
NPHP3Q7Z494 SNORD115-13-201ENST00000363358 82 ntBASIC0.86□□□□□ -2.27
NPHP3Q7Z494 SNORD115-41-201ENST00000363608 82 ntBASIC0.86□□□□□ -2.27
NPHP3Q7Z494 SNORD115-11-201ENST00000363616 82 ntBASIC0.86□□□□□ -2.27
NPHP3Q7Z494 SNORD115-5-201ENST00000363633 82 ntBASIC0.86□□□□□ -2.27
NPHP3Q7Z494 SNORD115-39-201ENST00000363694 82 ntBASIC0.86□□□□□ -2.27
NPHP3Q7Z494 SNORD115-4-201ENST00000363810 82 ntBASIC0.86□□□□□ -2.27
NPHP3Q7Z494 SNORD115-16-201ENST00000363887 82 ntBASIC0.86□□□□□ -2.27
NPHP3Q7Z494 SNORD115-6-201ENST00000363942 82 ntBASIC0.86□□□□□ -2.27
NPHP3Q7Z494 SNORD115-42-201ENST00000364273 82 ntBASIC0.86□□□□□ -2.27
NPHP3Q7Z494 RNU6-923P-201ENST00000364753 107 ntBASIC0.86□□□□□ -2.27
NPHP3Q7Z494 SNORD115-15-201ENST00000364809 81 ntBASIC0.86□□□□□ -2.27
NPHP3Q7Z494 SNORD115-1-201ENST00000364961 82 ntBASIC0.86□□□□□ -2.27
NPHP3Q7Z494 SNORD115-26-201ENST00000365067 82 ntBASIC0.86□□□□□ -2.27
NPHP3Q7Z494 SNORD115-10-201ENST00000365073 81 ntBASIC0.86□□□□□ -2.27
NPHP3Q7Z494 SNORD115-43-201ENST00000365503 82 ntBASIC0.86□□□□□ -2.27
NPHP3Q7Z494 SNORD115-36-201ENST00000365629 82 ntBASIC0.86□□□□□ -2.27
NPHP3Q7Z494 SNORA1-201ENST00000384107 130 ntBASIC0.86□□□□□ -2.27
NPHP3Q7Z494 RPS3AP1-201ENST00000413190 320 ntBASIC0.86□□□□□ -2.27
NPHP3Q7Z494 AC090844.1-201ENST00000422019 156 ntBASIC0.86□□□□□ -2.27
NPHP3Q7Z494 AC098934.3-201ENST00000430450 190 ntBASIC0.86□□□□□ -2.27
NPHP3Q7Z494 AC087499.4-201ENST00000448505 178 ntBASIC0.86□□□□□ -2.27
NPHP3Q7Z494 AC107297.1-201ENST00000459991 176 ntBASIC0.86□□□□□ -2.27
NPHP3Q7Z494 PSMC1P5-201ENST00000512850 177 ntBASIC0.86□□□□□ -2.27
NPHP3Q7Z494 RNU6-197P-201ENST00000516680 100 ntBASIC0.86□□□□□ -2.27
NPHP3Q7Z494 RNU6-126P-201ENST00000516685 103 ntBASIC0.86□□□□□ -2.27
NPHP3Q7Z494 RNU11-2P-201ENST00000516898 142 ntBASIC0.86□□□□□ -2.27
NPHP3Q7Z494 SNORD115-40-201ENST00000606510 82 ntBASIC0.86□□□□□ -2.27
NPHP3Q7Z494 RNU6-94P-201ENST00000607728 107 ntBASIC0.86□□□□□ -2.27
NPHP3Q7Z494 Y_RNA.20-201ENST00000362479 113 ntBASIC0.85□□□□□ -2.27
NPHP3Q7Z494 SNORA24-201ENST00000384096 131 ntBASIC0.85□□□□□ -2.27
NPHP3Q7Z494 SNORA27-201ENST00000384323 126 ntBASIC0.85□□□□□ -2.27
NPHP3Q7Z494 SNORA40.5-201ENST00000391061 128 ntBASIC0.85□□□□□ -2.27
NPHP3Q7Z494 SNORA26-201ENST00000391286 122 ntBASIC0.85□□□□□ -2.27
NPHP3Q7Z494 Y_RNA.626-201ENST00000411288 95 ntBASIC0.85□□□□□ -2.27
NPHP3Q7Z494 RNU2-64P-201ENST00000411315 191 ntBASIC0.85□□□□□ -2.27
NPHP3Q7Z494 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.85□□□□□ -2.27
NPHP3Q7Z494 AL138752.1-201ENST00000452964 351 ntBASIC0.85□□□□□ -2.27
NPHP3Q7Z494 RNA5SP153-201ENST00000516498 76 ntBASIC0.85□□□□□ -2.27
NPHP3Q7Z494 AP000942.4-201ENST00000604811 241 ntBASIC0.85□□□□□ -2.27
NPHP3Q7Z494 AC134878.1-201ENST00000619901 243 ntBASIC0.85□□□□□ -2.27
NPHP3Q7Z494 RNA5SP62-201ENST00000363457 110 ntBASIC0.84□□□□□ -2.28
NPHP3Q7Z494 RNU6-702P-201ENST00000364982 107 ntBASIC0.84□□□□□ -2.28
NPHP3Q7Z494 Y_RNA.307-201ENST00000365022 117 ntBASIC0.84□□□□□ -2.28
NPHP3Q7Z494 Y_RNA.447-201ENST00000384184 113 ntBASIC0.84□□□□□ -2.28
NPHP3Q7Z494 RNU6-125P-201ENST00000384505 107 ntBASIC0.84□□□□□ -2.28
NPHP3Q7Z494 SNORA2B-201ENST00000384583 137 ntBASIC0.84□□□□□ -2.28
NPHP3Q7Z494 RNU6-913P-201ENST00000390913 95 ntBASIC0.84□□□□□ -2.28
NPHP3Q7Z494 MIR1197-201ENST00000408818 88 ntBASIC0.84□□□□□ -2.28
NPHP3Q7Z494 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.84□□□□□ -2.28
NPHP3Q7Z494 MIR3149-201ENST00000584629 83 ntBASIC0.84□□□□□ -2.28
NPHP3Q7Z494 AC097639.2-201ENST00000603159 172 ntBASIC0.84□□□□□ -2.28
NPHP3Q7Z494 RNU2-4P-201ENST00000606190 192 ntBASIC0.84□□□□□ -2.28
NPHP3Q7Z494 AC106800.4-201ENST00000614905 153 ntBASIC0.84□□□□□ -2.28
NPHP3Q7Z494 SNORD113.3-201ENST00000364630 78 ntBASIC0.83□□□□□ -2.28
NPHP3Q7Z494 RNU6-396P-201ENST00000365369 105 ntBASIC0.83□□□□□ -2.28
NPHP3Q7Z494 RNU6-728P-201ENST00000365375 104 ntBASIC0.83□□□□□ -2.28
NPHP3Q7Z494 MIR608-201ENST00000384820 100 ntBASIC0.83□□□□□ -2.28
NPHP3Q7Z494 RNU6-205P-201ENST00000390858 107 ntBASIC0.83□□□□□ -2.28
NPHP3Q7Z494 SNORD77.3-201ENST00000391113 65 ntBASIC0.83□□□□□ -2.28
NPHP3Q7Z494 SNORD58.1-201ENST00000391313 66 ntBASIC0.83□□□□□ -2.28
NPHP3Q7Z494 RNU6-613P-201ENST00000410412 108 ntBASIC0.83□□□□□ -2.28
NPHP3Q7Z494 snoU13.16-201ENST00000459350 104 ntBASIC0.83□□□□□ -2.28
NPHP3Q7Z494 MIR2115-201ENST00000516657 100 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms