Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 SNORD115-29-201ENST00000362834 82 ntBASIC2.32□□□□□ -2.04
CNKSR3Q6P9H4 SNORD115-9-201ENST00000362912 82 ntBASIC2.32□□□□□ -2.04
CNKSR3Q6P9H4 SNORD115-21-201ENST00000362963 81 ntBASIC2.32□□□□□ -2.04
CNKSR3Q6P9H4 SNORD115-14-201ENST00000363090 81 ntBASIC2.32□□□□□ -2.04
CNKSR3Q6P9H4 SNORD115-13-201ENST00000363358 82 ntBASIC2.32□□□□□ -2.04
CNKSR3Q6P9H4 SNORD115-41-201ENST00000363608 82 ntBASIC2.32□□□□□ -2.04
CNKSR3Q6P9H4 SNORD115-11-201ENST00000363616 82 ntBASIC2.32□□□□□ -2.04
CNKSR3Q6P9H4 SNORD115-5-201ENST00000363633 82 ntBASIC2.32□□□□□ -2.04
CNKSR3Q6P9H4 SNORD115-39-201ENST00000363694 82 ntBASIC2.32□□□□□ -2.04
CNKSR3Q6P9H4 SNORD115-4-201ENST00000363810 82 ntBASIC2.32□□□□□ -2.04
CNKSR3Q6P9H4 SNORD115-16-201ENST00000363887 82 ntBASIC2.32□□□□□ -2.04
CNKSR3Q6P9H4 SNORD115-6-201ENST00000363942 82 ntBASIC2.32□□□□□ -2.04
CNKSR3Q6P9H4 SNORD115-42-201ENST00000364273 82 ntBASIC2.32□□□□□ -2.04
CNKSR3Q6P9H4 SNORD115-15-201ENST00000364809 81 ntBASIC2.32□□□□□ -2.04
CNKSR3Q6P9H4 SNORD115-1-201ENST00000364961 82 ntBASIC2.32□□□□□ -2.04
CNKSR3Q6P9H4 SNORD115-26-201ENST00000365067 82 ntBASIC2.32□□□□□ -2.04
CNKSR3Q6P9H4 SNORD115-10-201ENST00000365073 81 ntBASIC2.32□□□□□ -2.04
CNKSR3Q6P9H4 SNORA4.2-201ENST00000365313 147 ntBASIC2.32□□□□□ -2.04
CNKSR3Q6P9H4 SNORD115-43-201ENST00000365503 82 ntBASIC2.32□□□□□ -2.04
CNKSR3Q6P9H4 SNORD115-36-201ENST00000365629 82 ntBASIC2.32□□□□□ -2.04
CNKSR3Q6P9H4 RNU6-409P-201ENST00000384114 104 ntBASIC2.32□□□□□ -2.04
CNKSR3Q6P9H4 RNU6-679P-201ENST00000391003 106 ntBASIC2.32□□□□□ -2.04
CNKSR3Q6P9H4 AC096949.1-201ENST00000412047 152 ntBASIC2.32□□□□□ -2.04
CNKSR3Q6P9H4 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.32□□□□□ -2.04
CNKSR3Q6P9H4 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.32□□□□□ -2.04
CNKSR3Q6P9H4 HSPE1P9-201ENST00000440046 311 ntBASIC2.32□□□□□ -2.04
CNKSR3Q6P9H4 MIR4777-201ENST00000583710 86 ntBASIC2.32□□□□□ -2.04
CNKSR3Q6P9H4 FAM71BP1-201ENST00000604431 523 ntBASIC2.32□□□□□ -2.04
CNKSR3Q6P9H4 AC027279.3-201ENST00000625055 122 ntBASIC2.32□□□□□ -2.04
CNKSR3Q6P9H4 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.32□□□□□ -2.04
CNKSR3Q6P9H4 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CNKSR3Q6P9H4 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.31□□□□□ -2.04
CNKSR3Q6P9H4 Y_RNA.10-201ENST00000362371 110 ntBASIC2.31□□□□□ -2.04
CNKSR3Q6P9H4 MIR597-201ENST00000384968 97 ntBASIC2.31□□□□□ -2.04
CNKSR3Q6P9H4 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.31□□□□□ -2.04
CNKSR3Q6P9H4 U8.16-201ENST00000391279 133 ntBASIC2.31□□□□□ -2.04
CNKSR3Q6P9H4 RNA5SP225-201ENST00000410874 135 ntBASIC2.31□□□□□ -2.04
CNKSR3Q6P9H4 RNA5SP395-201ENST00000516567 118 ntBASIC2.31□□□□□ -2.04
CNKSR3Q6P9H4 AP000942.3-201ENST00000603702 160 ntBASIC2.31□□□□□ -2.04
CNKSR3Q6P9H4 MIR6845-201ENST00000613182 61 ntBASIC2.31□□□□□ -2.04
CNKSR3Q6P9H4 MIR6895-201ENST00000613497 78 ntBASIC2.31□□□□□ -2.04
CNKSR3Q6P9H4 Y_RNA.73-201ENST00000362910 113 ntBASIC2.3□□□□□ -2.04
CNKSR3Q6P9H4 RNU1-51P-201ENST00000365345 176 ntBASIC2.3□□□□□ -2.04
CNKSR3Q6P9H4 RNU6-1124P-201ENST00000384169 107 ntBASIC2.3□□□□□ -2.04
CNKSR3Q6P9H4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.3□□□□□ -2.04
CNKSR3Q6P9H4 MIR1283-2-201ENST00000408621 87 ntBASIC2.3□□□□□ -2.04
CNKSR3Q6P9H4 RNU4-69P-201ENST00000410677 143 ntBASIC2.3□□□□□ -2.04
CNKSR3Q6P9H4 AC022137.1-201ENST00000483735 151 ntBASIC2.3□□□□□ -2.04
CNKSR3Q6P9H4 RNU2-19P-201ENST00000517288 84 ntBASIC2.3□□□□□ -2.04
CNKSR3Q6P9H4 IGLV3-17-201ENST00000519099 244 ntBASIC2.3□□□□□ -2.04
CNKSR3Q6P9H4 AC005786.1-201ENST00000588553 154 ntBASIC2.3□□□□□ -2.04
CNKSR3Q6P9H4 Y_RNA.140-201ENST00000363474 103 ntBASIC2.29□□□□□ -2.04
CNKSR3Q6P9H4 Y_RNA.338-201ENST00000365320 114 ntBASIC2.29□□□□□ -2.04
CNKSR3Q6P9H4 Y_RNA.470-201ENST00000384307 117 ntBASIC2.29□□□□□ -2.04
CNKSR3Q6P9H4 RNU6-616P-201ENST00000384353 107 ntBASIC2.29□□□□□ -2.04
CNKSR3Q6P9H4 AL451046.2-201ENST00000403074 277 ntBASIC2.29□□□□□ -2.04
CNKSR3Q6P9H4 MIR1267-201ENST00000408723 78 ntBASIC2.29□□□□□ -2.04
CNKSR3Q6P9H4 SNORA7.5-201ENST00000410672 110 ntBASIC2.29□□□□□ -2.04
CNKSR3Q6P9H4 BTF3P4-201ENST00000418852 495 ntBASIC2.29□□□□□ -2.04
CNKSR3Q6P9H4 AC055731.1-201ENST00000474387 401 ntBASIC2.29□□□□□ -2.04
CNKSR3Q6P9H4 RNU2-13P-201ENST00000515909 113 ntBASIC2.29□□□□□ -2.04
CNKSR3Q6P9H4 SNORA28-201ENST00000606769 126 ntBASIC2.29□□□□□ -2.04
CNKSR3Q6P9H4 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.29□□□□□ -2.04
CNKSR3Q6P9H4 SNORD115-2-201ENST00000362842 82 ntBASIC2.28□□□□□ -2.04
CNKSR3Q6P9H4 Y_RNA.190-201ENST00000363964 101 ntBASIC2.28□□□□□ -2.04
CNKSR3Q6P9H4 SNORD115-20-201ENST00000365099 82 ntBASIC2.28□□□□□ -2.04
CNKSR3Q6P9H4 SNORA6-201ENST00000384033 151 ntBASIC2.28□□□□□ -2.04
CNKSR3Q6P9H4 MIR583-201ENST00000384846 75 ntBASIC2.28□□□□□ -2.04
CNKSR3Q6P9H4 RNU6-1319P-201ENST00000390855 104 ntBASIC2.28□□□□□ -2.04
CNKSR3Q6P9H4 RNU6-747P-201ENST00000390928 104 ntBASIC2.28□□□□□ -2.04
CNKSR3Q6P9H4 RNU6-241P-201ENST00000391148 104 ntBASIC2.28□□□□□ -2.04
CNKSR3Q6P9H4 RNU6-972P-201ENST00000391208 107 ntBASIC2.28□□□□□ -2.04
CNKSR3Q6P9H4 AC019129.1-201ENST00000403786 261 ntBASIC2.28□□□□□ -2.04
CNKSR3Q6P9H4 RNU6-177P-201ENST00000411257 104 ntBASIC2.28□□□□□ -2.04
CNKSR3Q6P9H4 AC069257.2-201ENST00000441819 155 ntBASIC2.28□□□□□ -2.04
CNKSR3Q6P9H4 RNU7-113P-201ENST00000459273 62 ntBASIC2.28□□□□□ -2.04
CNKSR3Q6P9H4 AC121758.2-201ENST00000553271 193 ntBASIC2.28□□□□□ -2.04
CNKSR3Q6P9H4 U1.36-201ENST00000620684 176 ntBASIC2.28□□□□□ -2.04
CNKSR3Q6P9H4 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.05
CNKSR3Q6P9H4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
CNKSR3Q6P9H4 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.27□□□□□ -2.05
CNKSR3Q6P9H4 RNU1-17P-201ENST00000363022 152 ntBASIC2.27□□□□□ -2.05
CNKSR3Q6P9H4 RNU6-833P-201ENST00000363486 107 ntBASIC2.27□□□□□ -2.05
CNKSR3Q6P9H4 RNY1P1-201ENST00000364372 112 ntBASIC2.27□□□□□ -2.05
CNKSR3Q6P9H4 RNU6-1019P-201ENST00000364424 107 ntBASIC2.27□□□□□ -2.05
CNKSR3Q6P9H4 RNU6-60P-201ENST00000364792 103 ntBASIC2.27□□□□□ -2.05
CNKSR3Q6P9H4 Y_RNA.299-201ENST00000364973 94 ntBASIC2.27□□□□□ -2.05
CNKSR3Q6P9H4 RNU6-424P-201ENST00000384367 105 ntBASIC2.27□□□□□ -2.05
CNKSR3Q6P9H4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CNKSR3Q6P9H4 MIR1255A-201ENST00000408338 113 ntBASIC2.27□□□□□ -2.05
CNKSR3Q6P9H4 RNA5SP450-201ENST00000411206 102 ntBASIC2.27□□□□□ -2.05
CNKSR3Q6P9H4 RPL23AP63-201ENST00000498752 471 ntBASIC2.27□□□□□ -2.05
CNKSR3Q6P9H4 RNA5SP168-201ENST00000516642 112 ntBASIC2.27□□□□□ -2.05
CNKSR3Q6P9H4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.27□□□□□ -2.05
CNKSR3Q6P9H4 MIR548AE2-201ENST00000583456 67 ntBASIC2.27□□□□□ -2.05
CNKSR3Q6P9H4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.27□□□□□ -2.05
CNKSR3Q6P9H4 MIR6841-201ENST00000637129 72 ntBASIC2.27□□□□□ -2.05
CNKSR3Q6P9H4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CNKSR3Q6P9H4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CNKSR3Q6P9H4 RNU6-1201P-201ENST00000384227 107 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 214 ms