Protein–RNA interactions for Protein: Q6P087

RPUSD3, Mitochondrial mRNA pseudouridine synthase RPUSD3, humanhuman

Known RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3Q6P087 snoU13.21-201ENST00000459368 105 ntBASIC0.52□□□□□ -2.33
RPUSD3Q6P087 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.52□□□□□ -2.33
RPUSD3Q6P087 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.52□□□□□ -2.33
RPUSD3Q6P087 uc_338.17-201ENST00000619633 179 ntBASIC0.52□□□□□ -2.33
RPUSD3Q6P087 AC243829.3-201ENST00000622177 108 ntBASIC0.52□□□□□ -2.33
RPUSD3Q6P087 MIR302B-201ENST00000362188 73 ntBASIC0.51□□□□□ -2.33
RPUSD3Q6P087 Y_RNA.634-201ENST00000364811 113 ntBASIC0.51□□□□□ -2.33
RPUSD3Q6P087 MIR92A1-201ENST00000385233 78 ntBASIC0.51□□□□□ -2.33
RPUSD3Q6P087 RNU6-1319P-201ENST00000390855 104 ntBASIC0.51□□□□□ -2.33
RPUSD3Q6P087 RNU6-913P-201ENST00000390913 95 ntBASIC0.51□□□□□ -2.33
RPUSD3Q6P087 RNU6-747P-201ENST00000390928 104 ntBASIC0.51□□□□□ -2.33
RPUSD3Q6P087 RNU6-1228P-201ENST00000391014 107 ntBASIC0.51□□□□□ -2.33
RPUSD3Q6P087 RNU6-241P-201ENST00000391148 104 ntBASIC0.51□□□□□ -2.33
RPUSD3Q6P087 MIR548I3-201ENST00000408378 149 ntBASIC0.51□□□□□ -2.33
RPUSD3Q6P087 MIR1257-201ENST00000408490 117 ntBASIC0.51□□□□□ -2.33
RPUSD3Q6P087 RNU6-447P-201ENST00000410293 104 ntBASIC0.51□□□□□ -2.33
RPUSD3Q6P087 RNU6-1118P-201ENST00000410382 104 ntBASIC0.51□□□□□ -2.33
RPUSD3Q6P087 RNU6-1076P-201ENST00000410397 104 ntBASIC0.51□□□□□ -2.33
RPUSD3Q6P087 RNU6-355P-201ENST00000410427 104 ntBASIC0.51□□□□□ -2.33
RPUSD3Q6P087 RNU6-791P-201ENST00000410467 104 ntBASIC0.51□□□□□ -2.33
RPUSD3Q6P087 RNU6-705P-201ENST00000410601 104 ntBASIC0.51□□□□□ -2.33
RPUSD3Q6P087 RNU6-1100P-201ENST00000410691 104 ntBASIC0.51□□□□□ -2.33
RPUSD3Q6P087 RNU6-860P-201ENST00000410860 104 ntBASIC0.51□□□□□ -2.33
RPUSD3Q6P087 RNU6-1217P-201ENST00000411276 104 ntBASIC0.51□□□□□ -2.33
RPUSD3Q6P087 RNU6-785P-201ENST00000411324 104 ntBASIC0.51□□□□□ -2.33
RPUSD3Q6P087 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.51□□□□□ -2.33
RPUSD3Q6P087 TRBVB-201ENST00000477100 408 ntBASIC0.51□□□□□ -2.33
RPUSD3Q6P087 RNU6-998P-201ENST00000515894 101 ntBASIC0.51□□□□□ -2.33
RPUSD3Q6P087 SNORD36C-201ENST00000516733 66 ntBASIC0.51□□□□□ -2.33
RPUSD3Q6P087 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.51□□□□□ -2.33
RPUSD3Q6P087 U6.90-201ENST00000614007 104 ntBASIC0.51□□□□□ -2.33
RPUSD3Q6P087 U6.70-201ENST00000620287 104 ntBASIC0.51□□□□□ -2.33
RPUSD3Q6P087 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
RPUSD3Q6P087 SNORA33.2-201ENST00000365413 134 ntBASIC0.5□□□□□ -2.33
RPUSD3Q6P087 Y_RNA.422-201ENST00000384054 114 ntBASIC0.5□□□□□ -2.33
RPUSD3Q6P087 MIR588-201ENST00000384900 83 ntBASIC0.5□□□□□ -2.33
RPUSD3Q6P087 MT-TF-201ENST00000387314 71 ntBASIC0.5□□□□□ -2.33
RPUSD3Q6P087 SNORA79-201ENST00000408376 140 ntBASIC0.5□□□□□ -2.33
RPUSD3Q6P087 RNU6-1165P-201ENST00000410119 107 ntBASIC0.5□□□□□ -2.33
RPUSD3Q6P087 RNU7-56P-201ENST00000458744 62 ntBASIC0.5□□□□□ -2.33
RPUSD3Q6P087 RNU2-11P-201ENST00000459191 187 ntBASIC0.5□□□□□ -2.33
RPUSD3Q6P087 snoU13.2-201ENST00000459201 104 ntBASIC0.5□□□□□ -2.33
RPUSD3Q6P087 MIR3612-201ENST00000579753 87 ntBASIC0.5□□□□□ -2.33
RPUSD3Q6P087 MIR924-201ENST00000638017 53 ntBASIC0.5□□□□□ -2.33
RPUSD3Q6P087 AC010332.2-201ENST00000613083 1904 ntBASIC0.49□□□□□ -2.33
RPUSD3Q6P087 MIR18A-201ENST00000362310 71 ntBASIC0.49□□□□□ -2.33
RPUSD3Q6P087 Y_RNA.7-201ENST00000362352 102 ntBASIC0.49□□□□□ -2.33
RPUSD3Q6P087 Y_RNA.26-201ENST00000362539 101 ntBASIC0.49□□□□□ -2.33
RPUSD3Q6P087 Y_RNA.66-201ENST00000362862 102 ntBASIC0.49□□□□□ -2.33
RPUSD3Q6P087 RNA5SP457-201ENST00000363657 124 ntBASIC0.49□□□□□ -2.33
RPUSD3Q6P087 RNA5SP499-201ENST00000363982 119 ntBASIC0.49□□□□□ -2.33
RPUSD3Q6P087 Y_RNA.199-201ENST00000364014 102 ntBASIC0.49□□□□□ -2.33
RPUSD3Q6P087 Y_RNA.216-201ENST00000364205 93 ntBASIC0.49□□□□□ -2.33
RPUSD3Q6P087 Y_RNA.454-201ENST00000384224 113 ntBASIC0.49□□□□□ -2.33
RPUSD3Q6P087 RNU6-602P-201ENST00000411155 105 ntBASIC0.49□□□□□ -2.33
RPUSD3Q6P087 RNU7-80P-201ENST00000459562 61 ntBASIC0.49□□□□□ -2.33
RPUSD3Q6P087 RNU6-570P-201ENST00000517051 105 ntBASIC0.49□□□□□ -2.33
RPUSD3Q6P087 AL162730.1-201ENST00000605734 292 ntBASIC0.49□□□□□ -2.33
RPUSD3Q6P087 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.49□□□□□ -2.33
RPUSD3Q6P087 MIR5087-201ENST00000635826 76 ntBASIC0.49□□□□□ -2.33
RPUSD3Q6P087 Y_RNA.82-201ENST00000363000 102 ntBASIC0.48□□□□□ -2.33
RPUSD3Q6P087 Y_RNA.92-201ENST00000363043 102 ntBASIC0.48□□□□□ -2.33
RPUSD3Q6P087 RNU6-1309P-201ENST00000363305 108 ntBASIC0.48□□□□□ -2.33
RPUSD3Q6P087 Y_RNA.235-201ENST00000364412 102 ntBASIC0.48□□□□□ -2.33
RPUSD3Q6P087 Y_RNA.306-201ENST00000365015 102 ntBASIC0.48□□□□□ -2.33
RPUSD3Q6P087 Y_RNA.312-201ENST00000365089 102 ntBASIC0.48□□□□□ -2.33
RPUSD3Q6P087 Y_RNA.322-201ENST00000365151 102 ntBASIC0.48□□□□□ -2.33
RPUSD3Q6P087 MIR616-201ENST00000385293 97 ntBASIC0.48□□□□□ -2.33
RPUSD3Q6P087 Y_RNA.590-201ENST00000410140 107 ntBASIC0.48□□□□□ -2.33
RPUSD3Q6P087 AF228730.3-201ENST00000436691 102 ntBASIC0.48□□□□□ -2.33
RPUSD3Q6P087 Y_RNA.650-201ENST00000459002 102 ntBASIC0.48□□□□□ -2.33
RPUSD3Q6P087 Y_RNA.679-201ENST00000516416 91 ntBASIC0.48□□□□□ -2.33
RPUSD3Q6P087 Y_RNA.777-201ENST00000516982 102 ntBASIC0.48□□□□□ -2.33
RPUSD3Q6P087 Y_RNA.771-201ENST00000598668 102 ntBASIC0.48□□□□□ -2.33
RPUSD3Q6P087 AC097639.2-201ENST00000603159 172 ntBASIC0.48□□□□□ -2.33
RPUSD3Q6P087 MIR6740-201ENST00000618268 113 ntBASIC0.48□□□□□ -2.33
RPUSD3Q6P087 Y_RNA.789-201ENST00000622480 102 ntBASIC0.48□□□□□ -2.33
RPUSD3Q6P087 MIR335-201ENST00000362173 94 ntBASIC0.47□□□□□ -2.33
RPUSD3Q6P087 RNU6-484P-201ENST00000384016 107 ntBASIC0.47□□□□□ -2.33
RPUSD3Q6P087 MIR125B2-201ENST00000385128 89 ntBASIC0.47□□□□□ -2.33
RPUSD3Q6P087 RNU6-1109P-201ENST00000391187 107 ntBASIC0.47□□□□□ -2.33
RPUSD3Q6P087 MIR3152-201ENST00000579801 74 ntBASIC0.47□□□□□ -2.33
RPUSD3Q6P087 AC020891.4-201ENST00000605745 93 ntBASIC0.47□□□□□ -2.33
RPUSD3Q6P087 uc_338.16-201ENST00000621804 95 ntBASIC0.47□□□□□ -2.33
RPUSD3Q6P087 Y_RNA.440-201ENST00000384120 114 ntBASIC0.46□□□□□ -2.34
RPUSD3Q6P087 Y_RNA.542-201ENST00000384641 111 ntBASIC0.46□□□□□ -2.34
RPUSD3Q6P087 AL606845.1-201ENST00000404881 255 ntBASIC0.46□□□□□ -2.34
RPUSD3Q6P087 AC098934.3-201ENST00000430450 190 ntBASIC0.46□□□□□ -2.34
RPUSD3Q6P087 RPL39P25-201ENST00000449384 154 ntBASIC0.46□□□□□ -2.34
RPUSD3Q6P087 AL138752.1-201ENST00000452964 351 ntBASIC0.46□□□□□ -2.34
RPUSD3Q6P087 AL157398.1-201ENST00000452981 186 ntBASIC0.46□□□□□ -2.34
RPUSD3Q6P087 MTND5P22-201ENST00000458380 195 ntBASIC0.46□□□□□ -2.34
RPUSD3Q6P087 SNORD2.1-201ENST00000458762 69 ntBASIC0.46□□□□□ -2.34
RPUSD3Q6P087 RNU7-185P-201ENST00000459215 60 ntBASIC0.46□□□□□ -2.34
RPUSD3Q6P087 Y_RNA.701-201ENST00000516812 110 ntBASIC0.46□□□□□ -2.34
RPUSD3Q6P087 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.46□□□□□ -2.34
RPUSD3Q6P087 U2.14-201ENST00000615943 113 ntBASIC0.46□□□□□ -2.34
RPUSD3Q6P087 AC090625.1-201ENST00000357130 210 ntBASIC0.45□□□□□ -2.34
RPUSD3Q6P087 MIR330-201ENST00000362196 94 ntBASIC0.45□□□□□ -2.34
RPUSD3Q6P087 Y_RNA.11-201ENST00000362375 109 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 220.4 ms