Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 SNORA67.5-201ENST00000391036 107 ntBASIC1.34□□□□□ -2.19
RNF220Q5VTB9 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.34□□□□□ -2.19
RNF220Q5VTB9 AC063976.4-201ENST00000421971 163 ntBASIC1.34□□□□□ -2.19
RNF220Q5VTB9 AC002429.1-201ENST00000437672 148 ntBASIC1.34□□□□□ -2.19
RNF220Q5VTB9 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.34□□□□□ -2.19
RNF220Q5VTB9 SNORD13-201ENST00000459299 104 ntBASIC1.34□□□□□ -2.19
RNF220Q5VTB9 DNAJC19P9-201ENST00000555084 351 ntBASIC1.34□□□□□ -2.19
RNF220Q5VTB9 AL020996.3-201ENST00000606617 222 ntBASIC1.34□□□□□ -2.19
RNF220Q5VTB9 AC104465.1-201ENST00000611365 139 ntBASIC1.34□□□□□ -2.19
RNF220Q5VTB9 MIR6516-201ENST00000630554 81 ntBASIC1.34□□□□□ -2.19
RNF220Q5VTB9 AC008163.1-202ENST00000636004 2889 ntBASIC1.34□□□□□ -2.2
RNF220Q5VTB9 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
RNF220Q5VTB9 RNU6-449P-201ENST00000383914 107 ntBASIC1.33□□□□□ -2.2
RNF220Q5VTB9 RNU6-907P-201ENST00000390924 102 ntBASIC1.33□□□□□ -2.2
RNF220Q5VTB9 RNU6-613P-201ENST00000410412 108 ntBASIC1.33□□□□□ -2.2
RNF220Q5VTB9 RNA5SP261-201ENST00000410536 106 ntBASIC1.33□□□□□ -2.2
RNF220Q5VTB9 AL354695.1-201ENST00000427935 228 ntBASIC1.33□□□□□ -2.2
RNF220Q5VTB9 RNU7-40P-201ENST00000516397 64 ntBASIC1.33□□□□□ -2.2
RNF220Q5VTB9 AC068338.1-201ENST00000565567 176 ntBASIC1.33□□□□□ -2.2
RNF220Q5VTB9 MIR3658-201ENST00000636291 56 ntBASIC1.33□□□□□ -2.2
RNF220Q5VTB9 Z97988.1-201ENST00000637697 135 ntBASIC1.33□□□□□ -2.2
RNF220Q5VTB9 Y_RNA.52-201ENST00000362760 96 ntBASIC1.32□□□□□ -2.2
RNF220Q5VTB9 SNORA1.1-201ENST00000364671 133 ntBASIC1.32□□□□□ -2.2
RNF220Q5VTB9 RNU6-60P-201ENST00000364792 103 ntBASIC1.32□□□□□ -2.2
RNF220Q5VTB9 SNORD38B-201ENST00000384690 67 ntBASIC1.32□□□□□ -2.2
RNF220Q5VTB9 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.32□□□□□ -2.2
RNF220Q5VTB9 RNA5SP458-201ENST00000516188 119 ntBASIC1.32□□□□□ -2.2
RNF220Q5VTB9 RNA5SP404-201ENST00000517118 132 ntBASIC1.32□□□□□ -2.2
RNF220Q5VTB9 AP000753.3-201ENST00000604083 169 ntBASIC1.32□□□□□ -2.2
RNF220Q5VTB9 SNORD38B-202ENST00000625943 69 ntBASIC1.32□□□□□ -2.2
RNF220Q5VTB9 U8.1-201ENST00000362843 134 ntBASIC1.31□□□□□ -2.2
RNF220Q5VTB9 Y_RNA.497-201ENST00000384447 98 ntBASIC1.31□□□□□ -2.2
RNF220Q5VTB9 MIR19B1-201ENST00000384829 87 ntBASIC1.31□□□□□ -2.2
RNF220Q5VTB9 MT-TN-201ENST00000387400 73 ntBASIC1.31□□□□□ -2.2
RNF220Q5VTB9 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.31□□□□□ -2.2
RNF220Q5VTB9 MIR3144-201ENST00000579460 79 ntBASIC1.31□□□□□ -2.2
RNF220Q5VTB9 MIR3152-201ENST00000579801 74 ntBASIC1.31□□□□□ -2.2
RNF220Q5VTB9 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.31□□□□□ -2.2
RNF220Q5VTB9 RNU1-124P-201ENST00000363861 145 ntBASIC1.3□□□□□ -2.2
RNF220Q5VTB9 Y_RNA.180-201ENST00000363867 113 ntBASIC1.3□□□□□ -2.2
RNF220Q5VTB9 RNU6-151P-201ENST00000364158 107 ntBASIC1.3□□□□□ -2.2
RNF220Q5VTB9 AC090844.1-201ENST00000422019 156 ntBASIC1.3□□□□□ -2.2
RNF220Q5VTB9 HMGN1P33-201ENST00000432945 451 ntBASIC1.3□□□□□ -2.2
RNF220Q5VTB9 MTATP6P21-201ENST00000440681 189 ntBASIC1.3□□□□□ -2.2
RNF220Q5VTB9 AC112693.2-201ENST00000556538 232 ntBASIC1.3□□□□□ -2.2
RNF220Q5VTB9 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.3□□□□□ -2.2
RNF220Q5VTB9 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
RNF220Q5VTB9 RNU6-654P-201ENST00000364373 107 ntBASIC1.29□□□□□ -2.2
RNF220Q5VTB9 RNU6-125P-201ENST00000384505 107 ntBASIC1.29□□□□□ -2.2
RNF220Q5VTB9 RNU6-939P-201ENST00000384634 107 ntBASIC1.29□□□□□ -2.2
RNF220Q5VTB9 RNU6-1319P-201ENST00000390855 104 ntBASIC1.29□□□□□ -2.2
RNF220Q5VTB9 RNU6-747P-201ENST00000390928 104 ntBASIC1.29□□□□□ -2.2
RNF220Q5VTB9 RNU6-241P-201ENST00000391148 104 ntBASIC1.29□□□□□ -2.2
RNF220Q5VTB9 RNU6-177P-201ENST00000411257 104 ntBASIC1.29□□□□□ -2.2
RNF220Q5VTB9 RPS3AP1-201ENST00000413190 320 ntBASIC1.29□□□□□ -2.2
RNF220Q5VTB9 MIR4264-201ENST00000583520 66 ntBASIC1.29□□□□□ -2.2
RNF220Q5VTB9 AL645939.4-201ENST00000604495 135 ntBASIC1.29□□□□□ -2.2
RNF220Q5VTB9 Y_RNA.778-201ENST00000620203 90 ntBASIC1.29□□□□□ -2.2
RNF220Q5VTB9 MIR6717-201ENST00000622747 73 ntBASIC1.29□□□□□ -2.2
RNF220Q5VTB9 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
RNF220Q5VTB9 RNU1-17P-201ENST00000363022 152 ntBASIC1.28□□□□□ -2.2
RNF220Q5VTB9 SNORD113.3-201ENST00000364630 78 ntBASIC1.28□□□□□ -2.2
RNF220Q5VTB9 RNU6-1130P-201ENST00000365434 107 ntBASIC1.28□□□□□ -2.2
RNF220Q5VTB9 Y_RNA.354-201ENST00000365448 111 ntBASIC1.28□□□□□ -2.2
RNF220Q5VTB9 SNORD18B-201ENST00000365659 72 ntBASIC1.28□□□□□ -2.2
RNF220Q5VTB9 SNORD116-18-201ENST00000383961 92 ntBASIC1.28□□□□□ -2.2
RNF220Q5VTB9 RNU6-804P-201ENST00000384286 107 ntBASIC1.28□□□□□ -2.2
RNF220Q5VTB9 MIR758-201ENST00000390227 88 ntBASIC1.28□□□□□ -2.2
RNF220Q5VTB9 Y_RNA.584-201ENST00000391090 114 ntBASIC1.28□□□□□ -2.2
RNF220Q5VTB9 SNORD111-201ENST00000408139 94 ntBASIC1.28□□□□□ -2.2
RNF220Q5VTB9 RNU6-1190P-201ENST00000410811 104 ntBASIC1.28□□□□□ -2.2
RNF220Q5VTB9 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.28□□□□□ -2.2
RNF220Q5VTB9 AC036111.3-201ENST00000526389 112 ntBASIC1.28□□□□□ -2.2
RNF220Q5VTB9 AC023827.1-201ENST00000569247 97 ntBASIC1.28□□□□□ -2.2
RNF220Q5VTB9 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.28□□□□□ -2.2
RNF220Q5VTB9 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
RNF220Q5VTB9 MIR377-201ENST00000362145 69 ntBASIC1.27□□□□□ -2.21
RNF220Q5VTB9 Y_RNA.8-201ENST00000362353 102 ntBASIC1.27□□□□□ -2.21
RNF220Q5VTB9 RNU4-11P-201ENST00000365287 132 ntBASIC1.27□□□□□ -2.21
RNF220Q5VTB9 Y_RNA.464-201ENST00000384282 110 ntBASIC1.27□□□□□ -2.21
RNF220Q5VTB9 SNORA20-201ENST00000384662 132 ntBASIC1.27□□□□□ -2.21
RNF220Q5VTB9 SNORA26.6-201ENST00000391256 115 ntBASIC1.27□□□□□ -2.21
RNF220Q5VTB9 RNU6-602P-201ENST00000411155 105 ntBASIC1.27□□□□□ -2.21
RNF220Q5VTB9 AC244023.1-201ENST00000426884 112 ntBASIC1.27□□□□□ -2.21
RNF220Q5VTB9 RNU7-45P-201ENST00000459460 63 ntBASIC1.27□□□□□ -2.21
RNF220Q5VTB9 RPS23P4-201ENST00000487908 423 ntBASIC1.27□□□□□ -2.21
RNF220Q5VTB9 AC242498.1-201ENST00000604134 111 ntBASIC1.27□□□□□ -2.21
RNF220Q5VTB9 AC106800.4-201ENST00000614905 153 ntBASIC1.27□□□□□ -2.21
RNF220Q5VTB9 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.27□□□□□ -2.21
RNF220Q5VTB9 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
RNF220Q5VTB9 Y_RNA.168-201ENST00000363740 102 ntBASIC1.26□□□□□ -2.21
RNF220Q5VTB9 Y_RNA.430-201ENST00000384081 110 ntBASIC1.26□□□□□ -2.21
RNF220Q5VTB9 SNORA2B-201ENST00000384583 137 ntBASIC1.26□□□□□ -2.21
RNF220Q5VTB9 RNA5SP236-201ENST00000516169 116 ntBASIC1.26□□□□□ -2.21
RNF220Q5VTB9 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.25□□□□□ -2.21
RNF220Q5VTB9 RNU6-580P-201ENST00000365159 107 ntBASIC1.25□□□□□ -2.21
RNF220Q5VTB9 Y_RNA.398-201ENST00000383952 99 ntBASIC1.25□□□□□ -2.21
RNF220Q5VTB9 MIR200A-201ENST00000384875 90 ntBASIC1.25□□□□□ -2.21
RNF220Q5VTB9 RNA5SP95-201ENST00000410319 137 ntBASIC1.25□□□□□ -2.21
RNF220Q5VTB9 RN7SKP179-201ENST00000516126 217 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 248.5 ms