Protein–RNA interactions for Protein: Q5SQQ9

VAX1, Ventral anterior homeobox 1, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAX1Q5SQQ9 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
VAX1Q5SQQ9 RNY4P3-201ENST00000365254 95 ntBASIC0.35□□□□□ -2.35
VAX1Q5SQQ9 Y_RNA.535-201ENST00000384612 99 ntBASIC0.35□□□□□ -2.35
VAX1Q5SQQ9 MIR520F-201ENST00000384824 87 ntBASIC0.35□□□□□ -2.35
VAX1Q5SQQ9 SNORA26-201ENST00000391286 122 ntBASIC0.35□□□□□ -2.35
VAX1Q5SQQ9 SNORD83.1-201ENST00000411362 77 ntBASIC0.35□□□□□ -2.35
VAX1Q5SQQ9 RPL21P38-201ENST00000418090 167 ntBASIC0.35□□□□□ -2.35
VAX1Q5SQQ9 MIR18B-201ENST00000454574 71 ntBASIC0.35□□□□□ -2.35
VAX1Q5SQQ9 RNU7-62P-201ENST00000458856 62 ntBASIC0.35□□□□□ -2.35
VAX1Q5SQQ9 SERF1AP1-201ENST00000514575 187 ntBASIC0.35□□□□□ -2.35
VAX1Q5SQQ9 RNU6-693P-201ENST00000516134 107 ntBASIC0.35□□□□□ -2.35
VAX1Q5SQQ9 RNU6-504P-201ENST00000516568 104 ntBASIC0.35□□□□□ -2.35
VAX1Q5SQQ9 RNU6-958P-201ENST00000516995 106 ntBASIC0.35□□□□□ -2.35
VAX1Q5SQQ9 AC100767.1-201ENST00000528178 123 ntBASIC0.35□□□□□ -2.35
VAX1Q5SQQ9 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.35□□□□□ -2.35
VAX1Q5SQQ9 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.35□□□□□ -2.35
VAX1Q5SQQ9 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.35□□□□□ -2.35
VAX1Q5SQQ9 Y_RNA.210-201ENST00000364161 110 ntBASIC0.34□□□□□ -2.36
VAX1Q5SQQ9 RNU4-67P-201ENST00000364569 141 ntBASIC0.34□□□□□ -2.36
VAX1Q5SQQ9 RNY1P8-201ENST00000383970 114 ntBASIC0.34□□□□□ -2.36
VAX1Q5SQQ9 RNY3P5-201ENST00000384127 102 ntBASIC0.34□□□□□ -2.36
VAX1Q5SQQ9 SNORD61-201ENST00000384252 73 ntBASIC0.34□□□□□ -2.36
VAX1Q5SQQ9 RNU6-30P-201ENST00000384561 107 ntBASIC0.34□□□□□ -2.36
VAX1Q5SQQ9 SNORA8.3-201ENST00000384679 139 ntBASIC0.34□□□□□ -2.36
VAX1Q5SQQ9 MIR626-201ENST00000385032 94 ntBASIC0.34□□□□□ -2.36
VAX1Q5SQQ9 MIR520H-201ENST00000385126 88 ntBASIC0.34□□□□□ -2.36
VAX1Q5SQQ9 RNU6-913P-201ENST00000390913 95 ntBASIC0.34□□□□□ -2.36
VAX1Q5SQQ9 RNU7-56P-201ENST00000458744 62 ntBASIC0.34□□□□□ -2.36
VAX1Q5SQQ9 RPS29P24-201ENST00000486345 171 ntBASIC0.34□□□□□ -2.36
VAX1Q5SQQ9 MIR4771-2-201ENST00000577758 74 ntBASIC0.34□□□□□ -2.36
VAX1Q5SQQ9 MIR4771-1-201ENST00000582617 74 ntBASIC0.34□□□□□ -2.36
VAX1Q5SQQ9 MIR4676-201ENST00000583078 72 ntBASIC0.34□□□□□ -2.36
VAX1Q5SQQ9 AC006006.1-201ENST00000603082 144 ntBASIC0.34□□□□□ -2.36
VAX1Q5SQQ9 Y_RNA.61-201ENST00000362835 102 ntBASIC0.33□□□□□ -2.36
VAX1Q5SQQ9 Y_RNA.84-201ENST00000363011 104 ntBASIC0.33□□□□□ -2.36
VAX1Q5SQQ9 RNU6-806P-201ENST00000365147 105 ntBASIC0.33□□□□□ -2.36
VAX1Q5SQQ9 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.33□□□□□ -2.36
VAX1Q5SQQ9 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.33□□□□□ -2.36
VAX1Q5SQQ9 RNU7-96P-201ENST00000459535 64 ntBASIC0.33□□□□□ -2.36
VAX1Q5SQQ9 RNA5SP153-201ENST00000516498 76 ntBASIC0.33□□□□□ -2.36
VAX1Q5SQQ9 AP003327.1-201ENST00000529684 127 ntBASIC0.33□□□□□ -2.36
VAX1Q5SQQ9 MIR4680-201ENST00000580906 66 ntBASIC0.33□□□□□ -2.36
VAX1Q5SQQ9 AC020891.4-201ENST00000605745 93 ntBASIC0.33□□□□□ -2.36
VAX1Q5SQQ9 MIR6740-201ENST00000618268 113 ntBASIC0.33□□□□□ -2.36
VAX1Q5SQQ9 AC067863.3-201ENST00000624172 122 ntBASIC0.33□□□□□ -2.36
VAX1Q5SQQ9 MIR18A-201ENST00000362310 71 ntBASIC0.32□□□□□ -2.36
VAX1Q5SQQ9 Y_RNA.26-201ENST00000362539 101 ntBASIC0.32□□□□□ -2.36
VAX1Q5SQQ9 Y_RNA.64-201ENST00000362845 102 ntBASIC0.32□□□□□ -2.36
VAX1Q5SQQ9 Y_RNA.66-201ENST00000362862 102 ntBASIC0.32□□□□□ -2.36
VAX1Q5SQQ9 Y_RNA.138-201ENST00000363462 102 ntBASIC0.32□□□□□ -2.36
VAX1Q5SQQ9 Y_RNA.229-201ENST00000364347 113 ntBASIC0.32□□□□□ -2.36
VAX1Q5SQQ9 Y_RNA.275-201ENST00000364726 110 ntBASIC0.32□□□□□ -2.36
VAX1Q5SQQ9 Y_RNA.410-201ENST00000383992 113 ntBASIC0.32□□□□□ -2.36
VAX1Q5SQQ9 RNU6-211P-201ENST00000384047 107 ntBASIC0.32□□□□□ -2.36
VAX1Q5SQQ9 Y_RNA.527-201ENST00000384573 102 ntBASIC0.32□□□□□ -2.36
VAX1Q5SQQ9 RNU6-1338P-201ENST00000516328 91 ntBASIC0.32□□□□□ -2.36
VAX1Q5SQQ9 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.32□□□□□ -2.36
VAX1Q5SQQ9 AC097639.2-201ENST00000603159 172 ntBASIC0.32□□□□□ -2.36
VAX1Q5SQQ9 Y_RNA.16-201ENST00000362421 102 ntBASIC0.31□□□□□ -2.36
VAX1Q5SQQ9 Y_RNA.24-201ENST00000362508 103 ntBASIC0.31□□□□□ -2.36
VAX1Q5SQQ9 Y_RNA.153-201ENST00000363615 91 ntBASIC0.31□□□□□ -2.36
VAX1Q5SQQ9 RNU4-10P-201ENST00000364383 140 ntBASIC0.31□□□□□ -2.36
VAX1Q5SQQ9 SNORA1.1-201ENST00000364671 133 ntBASIC0.31□□□□□ -2.36
VAX1Q5SQQ9 SNORA2A-201ENST00000383885 135 ntBASIC0.31□□□□□ -2.36
VAX1Q5SQQ9 MIR563-201ENST00000385080 79 ntBASIC0.31□□□□□ -2.36
VAX1Q5SQQ9 MIR938-201ENST00000401216 83 ntBASIC0.31□□□□□ -2.36
VAX1Q5SQQ9 RNU6-1203P-201ENST00000410703 110 ntBASIC0.31□□□□□ -2.36
VAX1Q5SQQ9 RNU6-602P-201ENST00000411155 105 ntBASIC0.31□□□□□ -2.36
VAX1Q5SQQ9 snoU13.2-201ENST00000459201 104 ntBASIC0.31□□□□□ -2.36
VAX1Q5SQQ9 RNU6-1299P-201ENST00000516316 100 ntBASIC0.31□□□□□ -2.36
VAX1Q5SQQ9 SNORD36C-201ENST00000516733 66 ntBASIC0.31□□□□□ -2.36
VAX1Q5SQQ9 AC020661.2-201ENST00000560114 134 ntBASIC0.31□□□□□ -2.36
VAX1Q5SQQ9 MIR3612-201ENST00000579753 87 ntBASIC0.31□□□□□ -2.36
VAX1Q5SQQ9 MIR4305-201ENST00000583252 102 ntBASIC0.31□□□□□ -2.36
VAX1Q5SQQ9 MIR3171-201ENST00000584270 74 ntBASIC0.31□□□□□ -2.36
VAX1Q5SQQ9 uc_338.6-201ENST00000613544 171 ntBASIC0.31□□□□□ -2.36
VAX1Q5SQQ9 Y_RNA.202-201ENST00000364083 110 ntBASIC0.3□□□□□ -2.36
VAX1Q5SQQ9 RNU6-923P-201ENST00000364753 107 ntBASIC0.3□□□□□ -2.36
VAX1Q5SQQ9 RNU5E-4P-201ENST00000364931 120 ntBASIC0.3□□□□□ -2.36
VAX1Q5SQQ9 RNU6-867P-201ENST00000364956 107 ntBASIC0.3□□□□□ -2.36
VAX1Q5SQQ9 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
VAX1Q5SQQ9 RNU6-484P-201ENST00000384016 107 ntBASIC0.3□□□□□ -2.36
VAX1Q5SQQ9 RNU6-1289P-201ENST00000384431 106 ntBASIC0.3□□□□□ -2.36
VAX1Q5SQQ9 SNORD77.3-201ENST00000391113 65 ntBASIC0.3□□□□□ -2.36
VAX1Q5SQQ9 RNA5SP299-201ENST00000391203 116 ntBASIC0.3□□□□□ -2.36
VAX1Q5SQQ9 SNORD100-201ENST00000408573 76 ntBASIC0.3□□□□□ -2.36
VAX1Q5SQQ9 RNU6-1165P-201ENST00000410119 107 ntBASIC0.3□□□□□ -2.36
VAX1Q5SQQ9 AF228730.3-201ENST00000436691 102 ntBASIC0.3□□□□□ -2.36
VAX1Q5SQQ9 RNU6-998P-201ENST00000515894 101 ntBASIC0.3□□□□□ -2.36
VAX1Q5SQQ9 MIR4802-201ENST00000581881 80 ntBASIC0.3□□□□□ -2.36
VAX1Q5SQQ9 AL162730.1-201ENST00000605734 292 ntBASIC0.3□□□□□ -2.36
VAX1Q5SQQ9 RNA5SP98-201ENST00000363158 137 ntBASIC0.29□□□□□ -2.36
VAX1Q5SQQ9 Y_RNA.634-201ENST00000364811 113 ntBASIC0.29□□□□□ -2.36
VAX1Q5SQQ9 Y_RNA.440-201ENST00000384120 114 ntBASIC0.29□□□□□ -2.36
VAX1Q5SQQ9 MIR588-201ENST00000384900 83 ntBASIC0.29□□□□□ -2.36
VAX1Q5SQQ9 MIR125B2-201ENST00000385128 89 ntBASIC0.29□□□□□ -2.36
VAX1Q5SQQ9 RNU6-985P-201ENST00000410182 104 ntBASIC0.29□□□□□ -2.36
VAX1Q5SQQ9 AC113618.1-201ENST00000416747 285 ntBASIC0.29□□□□□ -2.36
VAX1Q5SQQ9 SNORD2.1-201ENST00000458762 69 ntBASIC0.29□□□□□ -2.36
VAX1Q5SQQ9 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 190.9 ms