Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.35□□□□□ -2.19
TRIM60Q495X7 SEPT7P4-201ENST00000437076 306 ntBASIC1.35□□□□□ -2.19
TRIM60Q495X7 RNA5SP61-201ENST00000516453 100 ntBASIC1.35□□□□□ -2.19
TRIM60Q495X7 RNU6-861P-201ENST00000516745 106 ntBASIC1.35□□□□□ -2.19
TRIM60Q495X7 RNU6-794P-201ENST00000517261 64 ntBASIC1.35□□□□□ -2.19
TRIM60Q495X7 AC019288.1-201ENST00000557918 224 ntBASIC1.35□□□□□ -2.19
TRIM60Q495X7 AC004792.1-201ENST00000614523 137 ntBASIC1.35□□□□□ -2.19
TRIM60Q495X7 MIR342-201ENST00000362212 99 ntBASIC1.34□□□□□ -2.19
TRIM60Q495X7 Y_RNA.337-201ENST00000365312 102 ntBASIC1.34□□□□□ -2.19
TRIM60Q495X7 RNU6-910P-201ENST00000390844 107 ntBASIC1.34□□□□□ -2.19
TRIM60Q495X7 RPS26P48-201ENST00000491713 339 ntBASIC1.34□□□□□ -2.19
TRIM60Q495X7 RNU7-53P-201ENST00000516705 60 ntBASIC1.34□□□□□ -2.19
TRIM60Q495X7 RNU7-70P-201ENST00000516941 66 ntBASIC1.34□□□□□ -2.19
TRIM60Q495X7 RNU6-958P-201ENST00000516995 106 ntBASIC1.34□□□□□ -2.19
TRIM60Q495X7 RNA5SP327-201ENST00000362494 101 ntBASIC1.33□□□□□ -2.2
TRIM60Q495X7 SNORD26-201ENST00000384147 75 ntBASIC1.33□□□□□ -2.2
TRIM60Q495X7 RPS29P24-201ENST00000486345 171 ntBASIC1.33□□□□□ -2.2
TRIM60Q495X7 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
TRIM60Q495X7 MIR302B-201ENST00000362188 73 ntBASIC1.32□□□□□ -2.2
TRIM60Q495X7 RNA5SP264-201ENST00000363115 107 ntBASIC1.32□□□□□ -2.2
TRIM60Q495X7 SNORD77.3-201ENST00000391113 65 ntBASIC1.32□□□□□ -2.2
TRIM60Q495X7 RNA5SP127-201ENST00000411051 133 ntBASIC1.32□□□□□ -2.2
TRIM60Q495X7 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.32□□□□□ -2.2
TRIM60Q495X7 MIR4295-201ENST00000585286 85 ntBASIC1.32□□□□□ -2.2
TRIM60Q495X7 AL365205.2-201ENST00000594586 68 ntBASIC1.32□□□□□ -2.2
TRIM60Q495X7 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.32□□□□□ -2.2
TRIM60Q495X7 RNU6-978P-201ENST00000364371 103 ntBASIC1.31□□□□□ -2.2
TRIM60Q495X7 Y_RNA.270-201ENST00000364693 104 ntBASIC1.31□□□□□ -2.2
TRIM60Q495X7 Y_RNA.330-201ENST00000365230 109 ntBASIC1.31□□□□□ -2.2
TRIM60Q495X7 RNU6-1292P-201ENST00000383856 107 ntBASIC1.31□□□□□ -2.2
TRIM60Q495X7 SNORA25-201ENST00000384384 134 ntBASIC1.31□□□□□ -2.2
TRIM60Q495X7 SNORA80D-201ENST00000384488 135 ntBASIC1.31□□□□□ -2.2
TRIM60Q495X7 RNU6-938P-201ENST00000411285 103 ntBASIC1.31□□□□□ -2.2
TRIM60Q495X7 AL591704.2-201ENST00000421658 181 ntBASIC1.31□□□□□ -2.2
TRIM60Q495X7 AL035398.1-201ENST00000430869 322 ntBASIC1.31□□□□□ -2.2
TRIM60Q495X7 AC108059.2-201ENST00000434626 151 ntBASIC1.31□□□□□ -2.2
TRIM60Q495X7 snoU13.16-201ENST00000459350 104 ntBASIC1.31□□□□□ -2.2
TRIM60Q495X7 AC087343.1-201ENST00000477341 475 ntBASIC1.31□□□□□ -2.2
TRIM60Q495X7 RNU7-40P-201ENST00000516397 64 ntBASIC1.31□□□□□ -2.2
TRIM60Q495X7 RNU6-113P-201ENST00000516653 101 ntBASIC1.31□□□□□ -2.2
TRIM60Q495X7 AL022345.2-201ENST00000606307 135 ntBASIC1.31□□□□□ -2.2
TRIM60Q495X7 MTND1P7-201ENST00000632801 297 ntBASIC1.31□□□□□ -2.2
TRIM60Q495X7 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
TRIM60Q495X7 Y_RNA.240-201ENST00000364469 95 ntBASIC1.3□□□□□ -2.2
TRIM60Q495X7 Y_RNA.351-201ENST00000365436 96 ntBASIC1.3□□□□□ -2.2
TRIM60Q495X7 MIR758-201ENST00000390227 88 ntBASIC1.3□□□□□ -2.2
TRIM60Q495X7 SNORD37.2-201ENST00000391075 66 ntBASIC1.3□□□□□ -2.2
TRIM60Q495X7 RNU7-96P-201ENST00000459535 64 ntBASIC1.3□□□□□ -2.2
TRIM60Q495X7 RNU7-80P-201ENST00000459562 61 ntBASIC1.3□□□□□ -2.2
TRIM60Q495X7 RPS23P4-201ENST00000487908 423 ntBASIC1.3□□□□□ -2.2
TRIM60Q495X7 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.3□□□□□ -2.2
TRIM60Q495X7 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.3□□□□□ -2.2
TRIM60Q495X7 MIR3668-201ENST00000582138 75 ntBASIC1.3□□□□□ -2.2
TRIM60Q495X7 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
TRIM60Q495X7 Y_RNA.393-201ENST00000383936 102 ntBASIC1.29□□□□□ -2.2
TRIM60Q495X7 Y_RNA.440-201ENST00000384120 114 ntBASIC1.29□□□□□ -2.2
TRIM60Q495X7 Y_RNA.454-201ENST00000384224 113 ntBASIC1.29□□□□□ -2.2
TRIM60Q495X7 Y_RNA.494-201ENST00000384432 111 ntBASIC1.29□□□□□ -2.2
TRIM60Q495X7 RNU6-239P-201ENST00000390990 99 ntBASIC1.29□□□□□ -2.2
TRIM60Q495X7 MRPL35P3-201ENST00000421557 364 ntBASIC1.29□□□□□ -2.2
TRIM60Q495X7 RNU2-13P-201ENST00000515909 113 ntBASIC1.29□□□□□ -2.2
TRIM60Q495X7 AC068338.1-201ENST00000565567 176 ntBASIC1.29□□□□□ -2.2
TRIM60Q495X7 MIR5197-201ENST00000583721 112 ntBASIC1.29□□□□□ -2.2
TRIM60Q495X7 RNU6-597P-201ENST00000365620 102 ntBASIC1.28□□□□□ -2.2
TRIM60Q495X7 RNU2-11P-201ENST00000459191 187 ntBASIC1.28□□□□□ -2.2
TRIM60Q495X7 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.28□□□□□ -2.2
TRIM60Q495X7 MIR6844-201ENST00000637122 62 ntBASIC1.28□□□□□ -2.2
TRIM60Q495X7 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.27□□□□□ -2.21
TRIM60Q495X7 RNU6-682P-201ENST00000363843 106 ntBASIC1.27□□□□□ -2.21
TRIM60Q495X7 RNU6-396P-201ENST00000365369 105 ntBASIC1.27□□□□□ -2.21
TRIM60Q495X7 MIR624-201ENST00000385217 97 ntBASIC1.27□□□□□ -2.21
TRIM60Q495X7 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
TRIM60Q495X7 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.27□□□□□ -2.21
TRIM60Q495X7 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.27□□□□□ -2.21
TRIM60Q495X7 MIR2115-201ENST00000516657 100 ntBASIC1.27□□□□□ -2.21
TRIM60Q495X7 RNU11-2P-201ENST00000516898 142 ntBASIC1.27□□□□□ -2.21
TRIM60Q495X7 MIR548AO-201ENST00000579992 96 ntBASIC1.27□□□□□ -2.21
TRIM60Q495X7 PRELID3BP2-201ENST00000605362 201 ntBASIC1.27□□□□□ -2.21
TRIM60Q495X7 RNU4-84P-201ENST00000364200 139 ntBASIC1.26□□□□□ -2.21
TRIM60Q495X7 SNORA24-201ENST00000384096 131 ntBASIC1.26□□□□□ -2.21
TRIM60Q495X7 RNU6-768P-201ENST00000384683 107 ntBASIC1.26□□□□□ -2.21
TRIM60Q495X7 SNORD12-201ENST00000391002 90 ntBASIC1.26□□□□□ -2.21
TRIM60Q495X7 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.26□□□□□ -2.21
TRIM60Q495X7 snoU13.25-201ENST00000458945 104 ntBASIC1.26□□□□□ -2.21
TRIM60Q495X7 RNU7-90P-201ENST00000459216 62 ntBASIC1.26□□□□□ -2.21
TRIM60Q495X7 RNU6-998P-201ENST00000515894 101 ntBASIC1.26□□□□□ -2.21
TRIM60Q495X7 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.26□□□□□ -2.21
TRIM60Q495X7 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
TRIM60Q495X7 RNU6-818P-201ENST00000364837 108 ntBASIC1.25□□□□□ -2.21
TRIM60Q495X7 RNU1-133P-201ENST00000364867 167 ntBASIC1.25□□□□□ -2.21
TRIM60Q495X7 MIR150-201ENST00000385048 84 ntBASIC1.25□□□□□ -2.21
TRIM60Q495X7 SNORA75.5-201ENST00000391291 81 ntBASIC1.25□□□□□ -2.21
TRIM60Q495X7 MIR548I3-201ENST00000408378 149 ntBASIC1.25□□□□□ -2.21
TRIM60Q495X7 AC063976.4-201ENST00000421971 163 ntBASIC1.25□□□□□ -2.21
TRIM60Q495X7 RNU7-73P-201ENST00000458743 63 ntBASIC1.25□□□□□ -2.21
TRIM60Q495X7 SNORD79.1-201ENST00000516069 84 ntBASIC1.25□□□□□ -2.21
TRIM60Q495X7 RN7SKP179-201ENST00000516126 217 ntBASIC1.25□□□□□ -2.21
TRIM60Q495X7 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.25□□□□□ -2.21
TRIM60Q495X7 MIR5000-201ENST00000577717 103 ntBASIC1.25□□□□□ -2.21
TRIM60Q495X7 SEPT14P17-201ENST00000617978 177 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms