Protein–RNA interactions for Protein: Q3SXY7

LRIT3, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3Q3SXY7 RNU5E-4P-201ENST00000364931 120 ntBASIC0.46□□□□□ -2.34
LRIT3Q3SXY7 RNA5SP331-201ENST00000364986 107 ntBASIC0.46□□□□□ -2.34
LRIT3Q3SXY7 RNU4-45P-201ENST00000365469 141 ntBASIC0.46□□□□□ -2.34
LRIT3Q3SXY7 RNU6-1237P-201ENST00000384777 107 ntBASIC0.46□□□□□ -2.34
LRIT3Q3SXY7 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.46□□□□□ -2.34
LRIT3Q3SXY7 AC113618.1-201ENST00000416747 285 ntBASIC0.46□□□□□ -2.34
LRIT3Q3SXY7 AC090844.1-201ENST00000422019 156 ntBASIC0.46□□□□□ -2.34
LRIT3Q3SXY7 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.46□□□□□ -2.34
LRIT3Q3SXY7 RPS29P24-201ENST00000486345 171 ntBASIC0.46□□□□□ -2.34
LRIT3Q3SXY7 SNORA18.4-201ENST00000516440 124 ntBASIC0.46□□□□□ -2.34
LRIT3Q3SXY7 RNU6-504P-201ENST00000516568 104 ntBASIC0.46□□□□□ -2.34
LRIT3Q3SXY7 Y_RNA.711-201ENST00000516993 102 ntBASIC0.46□□□□□ -2.34
LRIT3Q3SXY7 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.46□□□□□ -2.34
LRIT3Q3SXY7 UBE2WP1-201ENST00000362030 340 ntBASIC0.45□□□□□ -2.34
LRIT3Q3SXY7 RNU4-10P-201ENST00000364383 140 ntBASIC0.45□□□□□ -2.34
LRIT3Q3SXY7 RNU6-867P-201ENST00000364956 107 ntBASIC0.45□□□□□ -2.34
LRIT3Q3SXY7 RNY4P3-201ENST00000365254 95 ntBASIC0.45□□□□□ -2.34
LRIT3Q3SXY7 Y_RNA.535-201ENST00000384612 99 ntBASIC0.45□□□□□ -2.34
LRIT3Q3SXY7 MIR518F-201ENST00000384973 87 ntBASIC0.45□□□□□ -2.34
LRIT3Q3SXY7 MIR140-201ENST00000385282 100 ntBASIC0.45□□□□□ -2.34
LRIT3Q3SXY7 RNU6-177P-201ENST00000411257 104 ntBASIC0.45□□□□□ -2.34
LRIT3Q3SXY7 AC244023.1-201ENST00000426884 112 ntBASIC0.45□□□□□ -2.34
LRIT3Q3SXY7 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.45□□□□□ -2.34
LRIT3Q3SXY7 SERF1AP1-201ENST00000514575 187 ntBASIC0.45□□□□□ -2.34
LRIT3Q3SXY7 MIR4804-201ENST00000581683 73 ntBASIC0.45□□□□□ -2.34
LRIT3Q3SXY7 AC242498.1-201ENST00000604134 111 ntBASIC0.45□□□□□ -2.34
LRIT3Q3SXY7 Y_RNA.24-201ENST00000362508 103 ntBASIC0.44□□□□□ -2.34
LRIT3Q3SXY7 Y_RNA.61-201ENST00000362835 102 ntBASIC0.44□□□□□ -2.34
LRIT3Q3SXY7 Y_RNA.64-201ENST00000362845 102 ntBASIC0.44□□□□□ -2.34
LRIT3Q3SXY7 SNORA1.1-201ENST00000364671 133 ntBASIC0.44□□□□□ -2.34
LRIT3Q3SXY7 RNU6-806P-201ENST00000365147 105 ntBASIC0.44□□□□□ -2.34
LRIT3Q3SXY7 SNORD61-201ENST00000384252 73 ntBASIC0.44□□□□□ -2.34
LRIT3Q3SXY7 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.44□□□□□ -2.34
LRIT3Q3SXY7 RNU6-1270P-201ENST00000517128 108 ntBASIC0.44□□□□□ -2.34
LRIT3Q3SXY7 MIR4676-201ENST00000583078 72 ntBASIC0.44□□□□□ -2.34
LRIT3Q3SXY7 MIR6718-201ENST00000616153 80 ntBASIC0.44□□□□□ -2.34
LRIT3Q3SXY7 Z97988.1-201ENST00000637697 135 ntBASIC0.44□□□□□ -2.34
LRIT3Q3SXY7 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
LRIT3Q3SXY7 Y_RNA.16-201ENST00000362421 102 ntBASIC0.43□□□□□ -2.34
LRIT3Q3SXY7 RNU6-888P-201ENST00000363010 101 ntBASIC0.43□□□□□ -2.34
LRIT3Q3SXY7 Y_RNA.138-201ENST00000363462 102 ntBASIC0.43□□□□□ -2.34
LRIT3Q3SXY7 SNORA2A-201ENST00000383885 135 ntBASIC0.43□□□□□ -2.34
LRIT3Q3SXY7 RNU6-211P-201ENST00000384047 107 ntBASIC0.43□□□□□ -2.34
LRIT3Q3SXY7 RNU6-913P-201ENST00000390913 95 ntBASIC0.43□□□□□ -2.34
LRIT3Q3SXY7 RNU6-938P-201ENST00000411285 103 ntBASIC0.43□□□□□ -2.34
LRIT3Q3SXY7 AC015818.7-201ENST00000428754 109 ntBASIC0.43□□□□□ -2.34
LRIT3Q3SXY7 AC087499.7-201ENST00000441958 109 ntBASIC0.43□□□□□ -2.34
LRIT3Q3SXY7 MIR18B-201ENST00000454574 71 ntBASIC0.43□□□□□ -2.34
LRIT3Q3SXY7 RN7SKP12-201ENST00000516275 143 ntBASIC0.43□□□□□ -2.34
LRIT3Q3SXY7 RNU6-1299P-201ENST00000516316 100 ntBASIC0.43□□□□□ -2.34
LRIT3Q3SXY7 SCARNA24.2-201ENST00000516968 130 ntBASIC0.43□□□□□ -2.34
LRIT3Q3SXY7 MIR4680-201ENST00000580906 66 ntBASIC0.43□□□□□ -2.34
LRIT3Q3SXY7 MIR3171-201ENST00000584270 74 ntBASIC0.43□□□□□ -2.34
LRIT3Q3SXY7 MIR8055-201ENST00000610739 97 ntBASIC0.43□□□□□ -2.34
LRIT3Q3SXY7 Y_RNA.84-201ENST00000363011 104 ntBASIC0.42□□□□□ -2.34
LRIT3Q3SXY7 SNORD18A-201ENST00000363753 72 ntBASIC0.42□□□□□ -2.34
LRIT3Q3SXY7 Y_RNA.202-201ENST00000364083 110 ntBASIC0.42□□□□□ -2.34
LRIT3Q3SXY7 Y_RNA.229-201ENST00000364347 113 ntBASIC0.42□□□□□ -2.34
LRIT3Q3SXY7 MIR938-201ENST00000401216 83 ntBASIC0.42□□□□□ -2.34
LRIT3Q3SXY7 RNU2-55P-201ENST00000411146 174 ntBASIC0.42□□□□□ -2.34
LRIT3Q3SXY7 RNU7-96P-201ENST00000459535 64 ntBASIC0.42□□□□□ -2.34
LRIT3Q3SXY7 RNU6-1338P-201ENST00000516328 91 ntBASIC0.42□□□□□ -2.34
LRIT3Q3SXY7 SNORD36C-201ENST00000516733 66 ntBASIC0.42□□□□□ -2.34
LRIT3Q3SXY7 MIR3612-201ENST00000579753 87 ntBASIC0.42□□□□□ -2.34
LRIT3Q3SXY7 MIR4802-201ENST00000581881 80 ntBASIC0.42□□□□□ -2.34
LRIT3Q3SXY7 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.42□□□□□ -2.34
LRIT3Q3SXY7 AC010332.2-201ENST00000613083 1904 ntBASIC0.41□□□□□ -2.34
LRIT3Q3SXY7 MIR18A-201ENST00000362310 71 ntBASIC0.41□□□□□ -2.34
LRIT3Q3SXY7 Y_RNA.26-201ENST00000362539 101 ntBASIC0.41□□□□□ -2.34
LRIT3Q3SXY7 RNU6-1289P-201ENST00000384431 106 ntBASIC0.41□□□□□ -2.34
LRIT3Q3SXY7 MIR588-201ENST00000384900 83 ntBASIC0.41□□□□□ -2.34
LRIT3Q3SXY7 MIR548A2-201ENST00000384956 97 ntBASIC0.41□□□□□ -2.34
LRIT3Q3SXY7 MIR626-201ENST00000385032 94 ntBASIC0.41□□□□□ -2.34
LRIT3Q3SXY7 AL162730.1-201ENST00000605734 292 ntBASIC0.41□□□□□ -2.34
LRIT3Q3SXY7 AC020891.4-201ENST00000605745 93 ntBASIC0.41□□□□□ -2.34
LRIT3Q3SXY7 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.34
LRIT3Q3SXY7 Y_RNA.7-201ENST00000362352 102 ntBASIC0.4□□□□□ -2.35
LRIT3Q3SXY7 RNU6-1309P-201ENST00000363305 108 ntBASIC0.4□□□□□ -2.35
LRIT3Q3SXY7 Y_RNA.275-201ENST00000364726 110 ntBASIC0.4□□□□□ -2.35
LRIT3Q3SXY7 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
LRIT3Q3SXY7 RNY1P8-201ENST00000383970 114 ntBASIC0.4□□□□□ -2.35
LRIT3Q3SXY7 Y_RNA.410-201ENST00000383992 113 ntBASIC0.4□□□□□ -2.35
LRIT3Q3SXY7 RNY3P5-201ENST00000384127 102 ntBASIC0.4□□□□□ -2.35
LRIT3Q3SXY7 RNU6-364P-201ENST00000384387 107 ntBASIC0.4□□□□□ -2.35
LRIT3Q3SXY7 SNORD77.3-201ENST00000391113 65 ntBASIC0.4□□□□□ -2.35
LRIT3Q3SXY7 RNU7-56P-201ENST00000458744 62 ntBASIC0.4□□□□□ -2.35
LRIT3Q3SXY7 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.4□□□□□ -2.35
LRIT3Q3SXY7 MIR6740-201ENST00000618268 113 ntBASIC0.4□□□□□ -2.35
LRIT3Q3SXY7 Y_RNA.216-201ENST00000364205 93 ntBASIC0.39□□□□□ -2.35
LRIT3Q3SXY7 RNU6-1189P-201ENST00000383958 107 ntBASIC0.39□□□□□ -2.35
LRIT3Q3SXY7 Y_RNA.432-201ENST00000384087 111 ntBASIC0.39□□□□□ -2.35
LRIT3Q3SXY7 RNU6-1319P-201ENST00000390855 104 ntBASIC0.39□□□□□ -2.35
LRIT3Q3SXY7 RNU6-747P-201ENST00000390928 104 ntBASIC0.39□□□□□ -2.35
LRIT3Q3SXY7 RNU6-241P-201ENST00000391148 104 ntBASIC0.39□□□□□ -2.35
LRIT3Q3SXY7 MIR548I3-201ENST00000408378 149 ntBASIC0.39□□□□□ -2.35
LRIT3Q3SXY7 MIR1257-201ENST00000408490 117 ntBASIC0.39□□□□□ -2.35
LRIT3Q3SXY7 RNU6-1165P-201ENST00000410119 107 ntBASIC0.39□□□□□ -2.35
LRIT3Q3SXY7 RNU6-447P-201ENST00000410293 104 ntBASIC0.39□□□□□ -2.35
LRIT3Q3SXY7 RNU6-1118P-201ENST00000410382 104 ntBASIC0.39□□□□□ -2.35
LRIT3Q3SXY7 RNU6-1076P-201ENST00000410397 104 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 237.1 ms