Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC104465.1-201ENST00000611365 139 ntBASIC1.74□□□□□ -2.13
CCDC144BQ3MJ40 Y_RNA.778-201ENST00000620203 90 ntBASIC1.74□□□□□ -2.13
CCDC144BQ3MJ40 RNU6-1082P-201ENST00000364574 107 ntBASIC1.73□□□□□ -2.13
CCDC144BQ3MJ40 RNU6-396P-201ENST00000365369 105 ntBASIC1.73□□□□□ -2.13
CCDC144BQ3MJ40 RNU6-910P-201ENST00000390844 107 ntBASIC1.73□□□□□ -2.13
CCDC144BQ3MJ40 AL591704.2-201ENST00000421658 181 ntBASIC1.73□□□□□ -2.13
CCDC144BQ3MJ40 MTATP6P21-201ENST00000440681 189 ntBASIC1.73□□□□□ -2.13
CCDC144BQ3MJ40 snoU13.25-201ENST00000458945 104 ntBASIC1.73□□□□□ -2.13
CCDC144BQ3MJ40 RNU6-1149P-201ENST00000516810 97 ntBASIC1.73□□□□□ -2.13
CCDC144BQ3MJ40 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.73□□□□□ -2.13
CCDC144BQ3MJ40 MIR376A2-201ENST00000636782 80 ntBASIC1.73□□□□□ -2.13
CCDC144BQ3MJ40 ZNF209P-201ENST00000593450 2304 ntBASIC1.72□□□□□ -2.13
CCDC144BQ3MJ40 MIR342-201ENST00000362212 99 ntBASIC1.72□□□□□ -2.13
CCDC144BQ3MJ40 SNORA25.3-201ENST00000363205 127 ntBASIC1.72□□□□□ -2.13
CCDC144BQ3MJ40 RNU1-133P-201ENST00000364867 167 ntBASIC1.72□□□□□ -2.13
CCDC144BQ3MJ40 RNU6-392P-201ENST00000364926 101 ntBASIC1.72□□□□□ -2.13
CCDC144BQ3MJ40 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.72□□□□□ -2.13
CCDC144BQ3MJ40 RNU6-588P-201ENST00000410281 105 ntBASIC1.72□□□□□ -2.13
CCDC144BQ3MJ40 MIR2115-201ENST00000516657 100 ntBASIC1.72□□□□□ -2.13
CCDC144BQ3MJ40 SCARNA15-202ENST00000516881 127 ntBASIC1.72□□□□□ -2.13
CCDC144BQ3MJ40 SNORA31.24-201ENST00000517232 57 ntBASIC1.72□□□□□ -2.13
CCDC144BQ3MJ40 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.72□□□□□ -2.13
CCDC144BQ3MJ40 MIR4421-201ENST00000578133 69 ntBASIC1.72□□□□□ -2.13
CCDC144BQ3MJ40 MIR548AO-201ENST00000579992 96 ntBASIC1.72□□□□□ -2.13
CCDC144BQ3MJ40 SNORD18B-201ENST00000365659 72 ntBASIC1.71□□□□□ -2.14
CCDC144BQ3MJ40 SNORD116-18-201ENST00000383961 92 ntBASIC1.71□□□□□ -2.14
CCDC144BQ3MJ40 RNU6-209P-201ENST00000384118 107 ntBASIC1.71□□□□□ -2.14
CCDC144BQ3MJ40 SNORA25-201ENST00000384384 134 ntBASIC1.71□□□□□ -2.14
CCDC144BQ3MJ40 MIR548I3-201ENST00000408378 149 ntBASIC1.71□□□□□ -2.14
CCDC144BQ3MJ40 AL392103.1-201ENST00000447000 198 ntBASIC1.71□□□□□ -2.14
CCDC144BQ3MJ40 RNA5SP61-201ENST00000516453 100 ntBASIC1.71□□□□□ -2.14
CCDC144BQ3MJ40 RNU1-92P-201ENST00000517017 135 ntBASIC1.71□□□□□ -2.14
CCDC144BQ3MJ40 AC112693.2-201ENST00000556538 232 ntBASIC1.71□□□□□ -2.14
CCDC144BQ3MJ40 AL022345.2-201ENST00000606307 135 ntBASIC1.71□□□□□ -2.14
CCDC144BQ3MJ40 AC091932.4-201ENST00000623386 200 ntBASIC1.71□□□□□ -2.14
CCDC144BQ3MJ40 RNA5SP327-201ENST00000362494 101 ntBASIC1.7□□□□□ -2.14
CCDC144BQ3MJ40 Y_RNA.52-201ENST00000362760 96 ntBASIC1.7□□□□□ -2.14
CCDC144BQ3MJ40 RNU6-151P-201ENST00000364158 107 ntBASIC1.7□□□□□ -2.14
CCDC144BQ3MJ40 MIR222-201ENST00000384992 110 ntBASIC1.7□□□□□ -2.14
CCDC144BQ3MJ40 Y_RNA.584-201ENST00000391090 114 ntBASIC1.7□□□□□ -2.14
CCDC144BQ3MJ40 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC144BQ3MJ40 MIR3152-201ENST00000579801 74 ntBASIC1.7□□□□□ -2.14
CCDC144BQ3MJ40 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.7□□□□□ -2.14
CCDC144BQ3MJ40 SEPT14P17-201ENST00000617978 177 ntBASIC1.7□□□□□ -2.14
CCDC144BQ3MJ40 MIR3658-201ENST00000636291 56 ntBASIC1.7□□□□□ -2.14
CCDC144BQ3MJ40 MTND5P32-201ENST00000560711 1802 ntBASIC1.69□□□□□ -2.14
CCDC144BQ3MJ40 SNORA25.8-201ENST00000364831 128 ntBASIC1.69□□□□□ -2.14
CCDC144BQ3MJ40 RNU4-11P-201ENST00000365287 132 ntBASIC1.69□□□□□ -2.14
CCDC144BQ3MJ40 Y_RNA.355-201ENST00000365462 98 ntBASIC1.69□□□□□ -2.14
CCDC144BQ3MJ40 RNU6-1336P-201ENST00000383886 109 ntBASIC1.69□□□□□ -2.14
CCDC144BQ3MJ40 RNU6-804P-201ENST00000384286 107 ntBASIC1.69□□□□□ -2.14
CCDC144BQ3MJ40 Y_RNA.497-201ENST00000384447 98 ntBASIC1.69□□□□□ -2.14
CCDC144BQ3MJ40 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
CCDC144BQ3MJ40 MIR513C-201ENST00000401352 84 ntBASIC1.69□□□□□ -2.14
CCDC144BQ3MJ40 MIR1185-1-201ENST00000408598 86 ntBASIC1.69□□□□□ -2.14
CCDC144BQ3MJ40 SNORD79.1-201ENST00000516069 84 ntBASIC1.69□□□□□ -2.14
CCDC144BQ3MJ40 RNU6-1212P-201ENST00000517023 104 ntBASIC1.69□□□□□ -2.14
CCDC144BQ3MJ40 AL596211.1-201ENST00000569873 2277 ntBASIC1.69□□□□□ -2.14
CCDC144BQ3MJ40 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
CCDC144BQ3MJ40 Y_RNA.8-201ENST00000362353 102 ntBASIC1.68□□□□□ -2.14
CCDC144BQ3MJ40 SNORA1.1-201ENST00000364671 133 ntBASIC1.68□□□□□ -2.14
CCDC144BQ3MJ40 Y_RNA.508-201ENST00000384502 114 ntBASIC1.68□□□□□ -2.14
CCDC144BQ3MJ40 MIR548I1-201ENST00000408810 149 ntBASIC1.68□□□□□ -2.14
CCDC144BQ3MJ40 MRPL35P3-201ENST00000421557 364 ntBASIC1.68□□□□□ -2.14
CCDC144BQ3MJ40 AL354695.1-201ENST00000427935 228 ntBASIC1.68□□□□□ -2.14
CCDC144BQ3MJ40 RNU7-90P-201ENST00000459216 62 ntBASIC1.68□□□□□ -2.14
CCDC144BQ3MJ40 AL020996.3-201ENST00000606617 222 ntBASIC1.68□□□□□ -2.14
CCDC144BQ3MJ40 MIR8055-201ENST00000610739 97 ntBASIC1.68□□□□□ -2.14
CCDC144BQ3MJ40 AL157834.3-201ENST00000615543 103 ntBASIC1.68□□□□□ -2.14
CCDC144BQ3MJ40 Y_RNA.354-201ENST00000365448 111 ntBASIC1.67□□□□□ -2.14
CCDC144BQ3MJ40 RNU6-913P-201ENST00000390913 95 ntBASIC1.67□□□□□ -2.14
CCDC144BQ3MJ40 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.67□□□□□ -2.14
CCDC144BQ3MJ40 MIR1276-201ENST00000408707 83 ntBASIC1.67□□□□□ -2.14
CCDC144BQ3MJ40 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.67□□□□□ -2.14
CCDC144BQ3MJ40 Z97988.1-201ENST00000637697 135 ntBASIC1.67□□□□□ -2.14
CCDC144BQ3MJ40 MIR26B-201ENST00000362251 77 ntBASIC1.66□□□□□ -2.14
CCDC144BQ3MJ40 RNU6-1130P-201ENST00000365434 107 ntBASIC1.66□□□□□ -2.14
CCDC144BQ3MJ40 Y_RNA.398-201ENST00000383952 99 ntBASIC1.66□□□□□ -2.14
CCDC144BQ3MJ40 Y_RNA.400-201ENST00000383963 111 ntBASIC1.66□□□□□ -2.14
CCDC144BQ3MJ40 SNORA20-201ENST00000384662 132 ntBASIC1.66□□□□□ -2.14
CCDC144BQ3MJ40 SNORD38B-201ENST00000384690 67 ntBASIC1.66□□□□□ -2.14
CCDC144BQ3MJ40 MT-TN-201ENST00000387400 73 ntBASIC1.66□□□□□ -2.14
CCDC144BQ3MJ40 MIR1304-201ENST00000408243 91 ntBASIC1.66□□□□□ -2.14
CCDC144BQ3MJ40 MIR1302-7-201ENST00000408841 72 ntBASIC1.66□□□□□ -2.14
CCDC144BQ3MJ40 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.66□□□□□ -2.14
CCDC144BQ3MJ40 RNU6-893P-201ENST00000458841 100 ntBASIC1.66□□□□□ -2.14
CCDC144BQ3MJ40 RNU7-21P-201ENST00000459430 62 ntBASIC1.66□□□□□ -2.14
CCDC144BQ3MJ40 AC019288.1-201ENST00000557918 224 ntBASIC1.66□□□□□ -2.14
CCDC144BQ3MJ40 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.66□□□□□ -2.14
CCDC144BQ3MJ40 AP000753.3-201ENST00000604083 169 ntBASIC1.66□□□□□ -2.14
CCDC144BQ3MJ40 SNORD38B-202ENST00000625943 69 ntBASIC1.66□□□□□ -2.14
CCDC144BQ3MJ40 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.66□□□□□ -2.14
CCDC144BQ3MJ40 Y_RNA.118-201ENST00000363300 101 ntBASIC1.65□□□□□ -2.15
CCDC144BQ3MJ40 Y_RNA.120-201ENST00000363304 110 ntBASIC1.65□□□□□ -2.15
CCDC144BQ3MJ40 Y_RNA.363-201ENST00000365529 113 ntBASIC1.65□□□□□ -2.15
CCDC144BQ3MJ40 Y_RNA.116-201ENST00000363292 103 ntBASIC1.64□□□□□ -2.15
CCDC144BQ3MJ40 RNU6-1319P-201ENST00000390855 104 ntBASIC1.64□□□□□ -2.15
CCDC144BQ3MJ40 RNU6-747P-201ENST00000390928 104 ntBASIC1.64□□□□□ -2.15
CCDC144BQ3MJ40 RNU6-241P-201ENST00000391148 104 ntBASIC1.64□□□□□ -2.15
CCDC144BQ3MJ40 RNU6-613P-201ENST00000410412 108 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms