Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 MTATP6P21-201ENST00000440681 189 ntBASIC1.12□□□□□ -2.23
SNAI3Q3KNW1 Y_RNA.651-201ENST00000459380 103 ntBASIC1.12□□□□□ -2.23
SNAI3Q3KNW1 RNU7-43P-201ENST00000516554 64 ntBASIC1.12□□□□□ -2.23
SNAI3Q3KNW1 U7.2-201ENST00000607576 63 ntBASIC1.12□□□□□ -2.23
SNAI3Q3KNW1 AL512598.1-201ENST00000610158 273 ntBASIC1.12□□□□□ -2.23
SNAI3Q3KNW1 TUG1_4.1-201ENST00000619464 181 ntBASIC1.12□□□□□ -2.23
SNAI3Q3KNW1 MIR8065-201ENST00000620577 100 ntBASIC1.12□□□□□ -2.23
SNAI3Q3KNW1 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.12□□□□□ -2.23
SNAI3Q3KNW1 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.12□□□□□ -2.23
SNAI3Q3KNW1 AL157777.2-201ENST00000258070 137 ntBASIC1.11□□□□□ -2.23
SNAI3Q3KNW1 Y_RNA.351-201ENST00000365436 96 ntBASIC1.11□□□□□ -2.23
SNAI3Q3KNW1 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
SNAI3Q3KNW1 RNU7-80P-201ENST00000459562 61 ntBASIC1.11□□□□□ -2.23
SNAI3Q3KNW1 AC107297.1-201ENST00000459991 176 ntBASIC1.11□□□□□ -2.23
SNAI3Q3KNW1 Y_RNA.690-201ENST00000516603 95 ntBASIC1.11□□□□□ -2.23
SNAI3Q3KNW1 Y_RNA.692-201ENST00000516627 105 ntBASIC1.11□□□□□ -2.23
SNAI3Q3KNW1 AC090821.2-201ENST00000523552 176 ntBASIC1.11□□□□□ -2.23
SNAI3Q3KNW1 MIR4421-201ENST00000578133 69 ntBASIC1.11□□□□□ -2.23
SNAI3Q3KNW1 MIR4764-201ENST00000580680 88 ntBASIC1.11□□□□□ -2.23
SNAI3Q3KNW1 MIR4298-201ENST00000584380 73 ntBASIC1.11□□□□□ -2.23
SNAI3Q3KNW1 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.1□□□□□ -2.23
SNAI3Q3KNW1 Y_RNA.537-201ENST00000384626 109 ntBASIC1.1□□□□□ -2.23
SNAI3Q3KNW1 MIR520C-201ENST00000385005 87 ntBASIC1.1□□□□□ -2.23
SNAI3Q3KNW1 SNORA40.6-201ENST00000391153 128 ntBASIC1.1□□□□□ -2.23
SNAI3Q3KNW1 AC108667.1-201ENST00000428618 249 ntBASIC1.1□□□□□ -2.23
SNAI3Q3KNW1 RNU7-95P-201ENST00000459222 64 ntBASIC1.1□□□□□ -2.23
SNAI3Q3KNW1 RNU7-96P-201ENST00000459535 64 ntBASIC1.1□□□□□ -2.23
SNAI3Q3KNW1 RPS29P24-201ENST00000486345 171 ntBASIC1.1□□□□□ -2.23
SNAI3Q3KNW1 AL133373.1-201ENST00000497098 94 ntBASIC1.1□□□□□ -2.23
SNAI3Q3KNW1 RNU6-998P-201ENST00000515894 101 ntBASIC1.1□□□□□ -2.23
SNAI3Q3KNW1 SNORA31.4-201ENST00000516049 129 ntBASIC1.1□□□□□ -2.23
SNAI3Q3KNW1 RNU6-922P-201ENST00000516753 99 ntBASIC1.1□□□□□ -2.23
SNAI3Q3KNW1 MIR3664-201ENST00000579074 99 ntBASIC1.1□□□□□ -2.23
SNAI3Q3KNW1 MIR3660-201ENST00000584845 100 ntBASIC1.1□□□□□ -2.23
SNAI3Q3KNW1 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.1□□□□□ -2.23
SNAI3Q3KNW1 AL022345.2-201ENST00000606307 135 ntBASIC1.1□□□□□ -2.23
SNAI3Q3KNW1 GHRLOS.1-201ENST00000610995 70 ntBASIC1.1□□□□□ -2.23
SNAI3Q3KNW1 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.23
SNAI3Q3KNW1 Y_RNA.280-201ENST00000364765 112 ntBASIC1.09□□□□□ -2.23
SNAI3Q3KNW1 MIR539-201ENST00000365690 78 ntBASIC1.09□□□□□ -2.23
SNAI3Q3KNW1 Y_RNA.454-201ENST00000384224 113 ntBASIC1.09□□□□□ -2.23
SNAI3Q3KNW1 RNU6-959P-201ENST00000384671 107 ntBASIC1.09□□□□□ -2.23
SNAI3Q3KNW1 RNU6-1067P-201ENST00000384752 107 ntBASIC1.09□□□□□ -2.23
SNAI3Q3KNW1 MIR570-201ENST00000384917 97 ntBASIC1.09□□□□□ -2.23
SNAI3Q3KNW1 AL035398.1-201ENST00000430869 322 ntBASIC1.09□□□□□ -2.23
SNAI3Q3KNW1 RNU6-971P-201ENST00000516920 106 ntBASIC1.09□□□□□ -2.23
SNAI3Q3KNW1 Y_RNA.757-201ENST00000578934 114 ntBASIC1.09□□□□□ -2.23
SNAI3Q3KNW1 MIR4791-201ENST00000607666 84 ntBASIC1.09□□□□□ -2.23
SNAI3Q3KNW1 AC011603.4-201ENST00000611325 277 ntBASIC1.09□□□□□ -2.23
SNAI3Q3KNW1 MIR6715A-201ENST00000615929 79 ntBASIC1.09□□□□□ -2.23
SNAI3Q3KNW1 AC243994.1-201ENST00000618627 109 ntBASIC1.09□□□□□ -2.23
SNAI3Q3KNW1 AC091932.4-201ENST00000623386 200 ntBASIC1.09□□□□□ -2.23
SNAI3Q3KNW1 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.09□□□□□ -2.24
SNAI3Q3KNW1 RNU1-133P-201ENST00000364867 167 ntBASIC1.08□□□□□ -2.24
SNAI3Q3KNW1 Y_RNA.294-201ENST00000364916 102 ntBASIC1.08□□□□□ -2.24
SNAI3Q3KNW1 RNU7-67P-201ENST00000459003 62 ntBASIC1.08□□□□□ -2.24
SNAI3Q3KNW1 RNU6-1211P-201ENST00000459179 105 ntBASIC1.08□□□□□ -2.24
SNAI3Q3KNW1 RNU6-113P-201ENST00000516653 101 ntBASIC1.08□□□□□ -2.24
SNAI3Q3KNW1 RNU6-958P-201ENST00000516995 106 ntBASIC1.08□□□□□ -2.24
SNAI3Q3KNW1 AL357312.1-201ENST00000603879 298 ntBASIC1.08□□□□□ -2.24
SNAI3Q3KNW1 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
SNAI3Q3KNW1 AC008133.2-201ENST00000624540 351 ntBASIC1.08□□□□□ -2.24
SNAI3Q3KNW1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
SNAI3Q3KNW1 MIR342-201ENST00000362212 99 ntBASIC1.07□□□□□ -2.24
SNAI3Q3KNW1 RNU6-349P-201ENST00000362402 107 ntBASIC1.07□□□□□ -2.24
SNAI3Q3KNW1 Y_RNA.114-201ENST00000363265 113 ntBASIC1.07□□□□□ -2.24
SNAI3Q3KNW1 Y_RNA.218-201ENST00000364218 104 ntBASIC1.07□□□□□ -2.24
SNAI3Q3KNW1 SNORA70.7-201ENST00000384159 133 ntBASIC1.07□□□□□ -2.24
SNAI3Q3KNW1 AL158147.1-201ENST00000443970 75 ntBASIC1.07□□□□□ -2.24
SNAI3Q3KNW1 RNU7-73P-201ENST00000458743 63 ntBASIC1.07□□□□□ -2.24
SNAI3Q3KNW1 RNU2-11P-201ENST00000459191 187 ntBASIC1.07□□□□□ -2.24
SNAI3Q3KNW1 RNU7-41P-201ENST00000515917 61 ntBASIC1.07□□□□□ -2.24
SNAI3Q3KNW1 RNU7-40P-201ENST00000516397 64 ntBASIC1.07□□□□□ -2.24
SNAI3Q3KNW1 RNU7-70P-201ENST00000516941 66 ntBASIC1.07□□□□□ -2.24
SNAI3Q3KNW1 MIR3192-201ENST00000584920 77 ntBASIC1.07□□□□□ -2.24
SNAI3Q3KNW1 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.07□□□□□ -2.24
SNAI3Q3KNW1 AL096861.1-201ENST00000610899 123 ntBASIC1.07□□□□□ -2.24
SNAI3Q3KNW1 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
SNAI3Q3KNW1 Y_RNA.71-201ENST00000362892 104 ntBASIC1.06□□□□□ -2.24
SNAI3Q3KNW1 SNORA7.1-201ENST00000363750 139 ntBASIC1.06□□□□□ -2.24
SNAI3Q3KNW1 SNORA51.10-201ENST00000384418 136 ntBASIC1.06□□□□□ -2.24
SNAI3Q3KNW1 RNU6-939P-201ENST00000384634 107 ntBASIC1.06□□□□□ -2.24
SNAI3Q3KNW1 SNORA19-201ENST00000384737 128 ntBASIC1.06□□□□□ -2.24
SNAI3Q3KNW1 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.06□□□□□ -2.24
SNAI3Q3KNW1 AL606753.1-201ENST00000427435 87 ntBASIC1.06□□□□□ -2.24
SNAI3Q3KNW1 AC009474.2-201ENST00000451383 136 ntBASIC1.06□□□□□ -2.24
SNAI3Q3KNW1 RNU7-53P-201ENST00000516705 60 ntBASIC1.06□□□□□ -2.24
SNAI3Q3KNW1 MIR4524B-201ENST00000581569 115 ntBASIC1.06□□□□□ -2.24
SNAI3Q3KNW1 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.06□□□□□ -2.24
SNAI3Q3KNW1 AC108081.1-201ENST00000604358 221 ntBASIC1.06□□□□□ -2.24
SNAI3Q3KNW1 U2.22-201ENST00000636441 106 ntBASIC1.06□□□□□ -2.24
SNAI3Q3KNW1 AL596211.1-201ENST00000569873 2277 ntBASIC1.06□□□□□ -2.24
SNAI3Q3KNW1 MIR302B-201ENST00000362188 73 ntBASIC1.05□□□□□ -2.24
SNAI3Q3KNW1 RNU6-647P-201ENST00000364243 107 ntBASIC1.05□□□□□ -2.24
SNAI3Q3KNW1 RNY1P6-201ENST00000384193 109 ntBASIC1.05□□□□□ -2.24
SNAI3Q3KNW1 RNU6-80P-201ENST00000384195 107 ntBASIC1.05□□□□□ -2.24
SNAI3Q3KNW1 MIR618-201ENST00000385287 98 ntBASIC1.05□□□□□ -2.24
SNAI3Q3KNW1 RNU6-913P-201ENST00000390913 95 ntBASIC1.05□□□□□ -2.24
SNAI3Q3KNW1 BTF3P4-201ENST00000418852 495 ntBASIC1.05□□□□□ -2.24
SNAI3Q3KNW1 snoU13.25-201ENST00000458945 104 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms