Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 Y_RNA.483-201ENST00000384380 101 ntBASIC0.58□□□□□ -2.32
SHROOM1Q2M3G4 SNORA40.5-201ENST00000391061 128 ntBASIC0.58□□□□□ -2.32
SHROOM1Q2M3G4 RNU2-70P-201ENST00000410718 179 ntBASIC0.58□□□□□ -2.32
SHROOM1Q2M3G4 RNU6-1190P-201ENST00000410811 104 ntBASIC0.58□□□□□ -2.32
SHROOM1Q2M3G4 AC087499.4-201ENST00000448505 178 ntBASIC0.58□□□□□ -2.32
SHROOM1Q2M3G4 AL157398.1-201ENST00000452981 186 ntBASIC0.58□□□□□ -2.32
SHROOM1Q2M3G4 RNU7-62P-201ENST00000458856 62 ntBASIC0.58□□□□□ -2.32
SHROOM1Q2M3G4 RNU6-1299P-201ENST00000516316 100 ntBASIC0.58□□□□□ -2.32
SHROOM1Q2M3G4 RNU4-54P-201ENST00000516428 129 ntBASIC0.58□□□□□ -2.32
SHROOM1Q2M3G4 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.58□□□□□ -2.32
SHROOM1Q2M3G4 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.58□□□□□ -2.32
SHROOM1Q2M3G4 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
SHROOM1Q2M3G4 Y_RNA.115-201ENST00000363272 98 ntBASIC0.57□□□□□ -2.32
SHROOM1Q2M3G4 Y_RNA.199-201ENST00000364014 102 ntBASIC0.57□□□□□ -2.32
SHROOM1Q2M3G4 RNU6-580P-201ENST00000365159 107 ntBASIC0.57□□□□□ -2.32
SHROOM1Q2M3G4 SNORA24-201ENST00000384096 131 ntBASIC0.57□□□□□ -2.32
SHROOM1Q2M3G4 MIR520H-201ENST00000385126 88 ntBASIC0.57□□□□□ -2.32
SHROOM1Q2M3G4 MT-TW-201ENST00000387382 68 ntBASIC0.57□□□□□ -2.32
SHROOM1Q2M3G4 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.57□□□□□ -2.32
SHROOM1Q2M3G4 AL358176.2-201ENST00000425769 204 ntBASIC0.57□□□□□ -2.32
SHROOM1Q2M3G4 SNRPGP8-201ENST00000454064 226 ntBASIC0.57□□□□□ -2.32
SHROOM1Q2M3G4 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.57□□□□□ -2.32
SHROOM1Q2M3G4 Y_RNA.679-201ENST00000516416 91 ntBASIC0.57□□□□□ -2.32
SHROOM1Q2M3G4 AL442663.2-201ENST00000554385 511 ntBASIC0.57□□□□□ -2.32
SHROOM1Q2M3G4 AC020891.4-201ENST00000605745 93 ntBASIC0.57□□□□□ -2.32
SHROOM1Q2M3G4 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
SHROOM1Q2M3G4 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.57□□□□□ -2.32
SHROOM1Q2M3G4 AC010332.2-201ENST00000613083 1904 ntBASIC0.56□□□□□ -2.32
SHROOM1Q2M3G4 Y_RNA.634-201ENST00000364811 113 ntBASIC0.56□□□□□ -2.32
SHROOM1Q2M3G4 Y_RNA.416-201ENST00000384014 113 ntBASIC0.56□□□□□ -2.32
SHROOM1Q2M3G4 Y_RNA.518-201ENST00000384552 113 ntBASIC0.56□□□□□ -2.32
SHROOM1Q2M3G4 SNORD38B-201ENST00000384690 67 ntBASIC0.56□□□□□ -2.32
SHROOM1Q2M3G4 AL606845.1-201ENST00000404881 255 ntBASIC0.56□□□□□ -2.32
SHROOM1Q2M3G4 Y_RNA.590-201ENST00000410140 107 ntBASIC0.56□□□□□ -2.32
SHROOM1Q2M3G4 RPS29P24-201ENST00000486345 171 ntBASIC0.56□□□□□ -2.32
SHROOM1Q2M3G4 RNU6-504P-201ENST00000516568 104 ntBASIC0.56□□□□□ -2.32
SHROOM1Q2M3G4 MIR4264-201ENST00000583520 66 ntBASIC0.56□□□□□ -2.32
SHROOM1Q2M3G4 MIR8087-201ENST00000612745 78 ntBASIC0.56□□□□□ -2.32
SHROOM1Q2M3G4 MIR6740-201ENST00000618268 113 ntBASIC0.56□□□□□ -2.32
SHROOM1Q2M3G4 SNORD38B-202ENST00000625943 69 ntBASIC0.56□□□□□ -2.32
SHROOM1Q2M3G4 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
SHROOM1Q2M3G4 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.55□□□□□ -2.32
SHROOM1Q2M3G4 Y_RNA.66-201ENST00000362862 102 ntBASIC0.55□□□□□ -2.32
SHROOM1Q2M3G4 RNU6-888P-201ENST00000363010 101 ntBASIC0.55□□□□□ -2.32
SHROOM1Q2M3G4 Y_RNA.85-201ENST00000363014 111 ntBASIC0.55□□□□□ -2.32
SHROOM1Q2M3G4 Y_RNA.304-201ENST00000365011 112 ntBASIC0.55□□□□□ -2.32
SHROOM1Q2M3G4 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
SHROOM1Q2M3G4 SNORD24-201ENST00000383884 75 ntBASIC0.55□□□□□ -2.32
SHROOM1Q2M3G4 Y_RNA.461-201ENST00000384263 103 ntBASIC0.55□□□□□ -2.32
SHROOM1Q2M3G4 MT-TN-201ENST00000387400 73 ntBASIC0.55□□□□□ -2.32
SHROOM1Q2M3G4 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.55□□□□□ -2.32
SHROOM1Q2M3G4 SNORD2.1-201ENST00000458762 69 ntBASIC0.55□□□□□ -2.32
SHROOM1Q2M3G4 RNU2-11P-201ENST00000459191 187 ntBASIC0.55□□□□□ -2.32
SHROOM1Q2M3G4 RNU7-45P-201ENST00000459460 63 ntBASIC0.55□□□□□ -2.32
SHROOM1Q2M3G4 RNU6-561P-201ENST00000516222 102 ntBASIC0.55□□□□□ -2.32
SHROOM1Q2M3G4 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
SHROOM1Q2M3G4 MIR8055-201ENST00000610739 97 ntBASIC0.55□□□□□ -2.32
SHROOM1Q2M3G4 AL109933.3-201ENST00000619095 188 ntBASIC0.55□□□□□ -2.32
SHROOM1Q2M3G4 Y_RNA.30-201ENST00000362572 97 ntBASIC0.54□□□□□ -2.32
SHROOM1Q2M3G4 Y_RNA.54-201ENST00000362766 105 ntBASIC0.54□□□□□ -2.32
SHROOM1Q2M3G4 RNU6-484P-201ENST00000384016 107 ntBASIC0.54□□□□□ -2.32
SHROOM1Q2M3G4 Y_RNA.432-201ENST00000384087 111 ntBASIC0.54□□□□□ -2.32
SHROOM1Q2M3G4 SNORA1-201ENST00000384107 130 ntBASIC0.54□□□□□ -2.32
SHROOM1Q2M3G4 MIR1302-6-201ENST00000408466 90 ntBASIC0.54□□□□□ -2.32
SHROOM1Q2M3G4 Y_RNA.681-201ENST00000516445 113 ntBASIC0.54□□□□□ -2.32
SHROOM1Q2M3G4 Y_RNA.720-201ENST00000517166 92 ntBASIC0.54□□□□□ -2.32
SHROOM1Q2M3G4 MIR4676-201ENST00000583078 72 ntBASIC0.54□□□□□ -2.32
SHROOM1Q2M3G4 U2.14-201ENST00000615943 113 ntBASIC0.54□□□□□ -2.32
SHROOM1Q2M3G4 AL365265.1-201ENST00000621045 234 ntBASIC0.54□□□□□ -2.32
SHROOM1Q2M3G4 MIR377-201ENST00000362145 69 ntBASIC0.53□□□□□ -2.32
SHROOM1Q2M3G4 MIR335-201ENST00000362173 94 ntBASIC0.53□□□□□ -2.32
SHROOM1Q2M3G4 Y_RNA.82-201ENST00000363000 102 ntBASIC0.53□□□□□ -2.32
SHROOM1Q2M3G4 Y_RNA.92-201ENST00000363043 102 ntBASIC0.53□□□□□ -2.32
SHROOM1Q2M3G4 Y_RNA.235-201ENST00000364412 102 ntBASIC0.53□□□□□ -2.32
SHROOM1Q2M3G4 Y_RNA.251-201ENST00000364551 99 ntBASIC0.53□□□□□ -2.32
SHROOM1Q2M3G4 SNORA1.1-201ENST00000364671 133 ntBASIC0.53□□□□□ -2.32
SHROOM1Q2M3G4 Y_RNA.306-201ENST00000365015 102 ntBASIC0.53□□□□□ -2.32
SHROOM1Q2M3G4 Y_RNA.312-201ENST00000365089 102 ntBASIC0.53□□□□□ -2.32
SHROOM1Q2M3G4 Y_RNA.322-201ENST00000365151 102 ntBASIC0.53□□□□□ -2.32
SHROOM1Q2M3G4 Y_RNA.422-201ENST00000384054 114 ntBASIC0.53□□□□□ -2.32
SHROOM1Q2M3G4 MIR588-201ENST00000384900 83 ntBASIC0.53□□□□□ -2.32
SHROOM1Q2M3G4 SNORD12C-201ENST00000386307 89 ntBASIC0.53□□□□□ -2.32
SHROOM1Q2M3G4 RNU7-73P-201ENST00000458743 63 ntBASIC0.53□□□□□ -2.32
SHROOM1Q2M3G4 Y_RNA.650-201ENST00000459002 102 ntBASIC0.53□□□□□ -2.32
SHROOM1Q2M3G4 RNU7-53P-201ENST00000516705 60 ntBASIC0.53□□□□□ -2.32
SHROOM1Q2M3G4 Y_RNA.777-201ENST00000516982 102 ntBASIC0.53□□□□□ -2.32
SHROOM1Q2M3G4 Y_RNA.771-201ENST00000598668 102 ntBASIC0.53□□□□□ -2.32
SHROOM1Q2M3G4 Y_RNA.789-201ENST00000622480 102 ntBASIC0.53□□□□□ -2.32
SHROOM1Q2M3G4 Y_RNA.23-201ENST00000362496 106 ntBASIC0.52□□□□□ -2.33
SHROOM1Q2M3G4 Y_RNA.326-201ENST00000365176 113 ntBASIC0.52□□□□□ -2.33
SHROOM1Q2M3G4 RNU6-945P-201ENST00000383947 107 ntBASIC0.52□□□□□ -2.33
SHROOM1Q2M3G4 MIR548F4-201ENST00000408515 105 ntBASIC0.52□□□□□ -2.33
SHROOM1Q2M3G4 RNA5SP127-201ENST00000411051 133 ntBASIC0.52□□□□□ -2.33
SHROOM1Q2M3G4 RNU2-55P-201ENST00000411146 174 ntBASIC0.52□□□□□ -2.33
SHROOM1Q2M3G4 RNU6-602P-201ENST00000411155 105 ntBASIC0.52□□□□□ -2.33
SHROOM1Q2M3G4 AC114737.2-201ENST00000421583 173 ntBASIC0.52□□□□□ -2.33
SHROOM1Q2M3G4 RNU6-126P-201ENST00000516685 103 ntBASIC0.52□□□□□ -2.33
SHROOM1Q2M3G4 MIR4643-201ENST00000577473 78 ntBASIC0.52□□□□□ -2.33
SHROOM1Q2M3G4 MIR4804-201ENST00000581683 73 ntBASIC0.52□□□□□ -2.33
SHROOM1Q2M3G4 MIR4282-201ENST00000583613 67 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 225.7 ms