Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 SNORA18.7-201ENST00000516910 131 ntBASIC1.83□□□□□ -2.12
SF3B3Q15393 RNU6-349P-201ENST00000362402 107 ntBASIC1.82□□□□□ -2.12
SF3B3Q15393 RNU6-1056P-201ENST00000383996 107 ntBASIC1.82□□□□□ -2.12
SF3B3Q15393 Y_RNA.494-201ENST00000384432 111 ntBASIC1.82□□□□□ -2.12
SF3B3Q15393 MIR526A1-201ENST00000384897 85 ntBASIC1.82□□□□□ -2.12
SF3B3Q15393 MIR499A-201ENST00000384903 122 ntBASIC1.82□□□□□ -2.12
SF3B3Q15393 U8.17-201ENST00000391292 132 ntBASIC1.82□□□□□ -2.12
SF3B3Q15393 RNU6-1064P-201ENST00000410626 104 ntBASIC1.82□□□□□ -2.12
SF3B3Q15393 AL354695.1-201ENST00000427935 228 ntBASIC1.82□□□□□ -2.12
SF3B3Q15393 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.82□□□□□ -2.12
SF3B3Q15393 RNU7-181P-201ENST00000517234 74 ntBASIC1.82□□□□□ -2.12
SF3B3Q15393 MIR4778-201ENST00000577635 80 ntBASIC1.82□□□□□ -2.12
SF3B3Q15393 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.82□□□□□ -2.12
SF3B3Q15393 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.82□□□□□ -2.12
SF3B3Q15393 SNORD115-34-201ENST00000362441 82 ntBASIC1.81□□□□□ -2.12
SF3B3Q15393 SNORD115-12-201ENST00000362583 82 ntBASIC1.81□□□□□ -2.12
SF3B3Q15393 SNORD115-29-201ENST00000362834 82 ntBASIC1.81□□□□□ -2.12
SF3B3Q15393 SNORD115-9-201ENST00000362912 82 ntBASIC1.81□□□□□ -2.12
SF3B3Q15393 SNORD115-21-201ENST00000362963 81 ntBASIC1.81□□□□□ -2.12
SF3B3Q15393 SNORD115-14-201ENST00000363090 81 ntBASIC1.81□□□□□ -2.12
SF3B3Q15393 SNORD115-13-201ENST00000363358 82 ntBASIC1.81□□□□□ -2.12
SF3B3Q15393 SNORD115-41-201ENST00000363608 82 ntBASIC1.81□□□□□ -2.12
SF3B3Q15393 SNORD115-11-201ENST00000363616 82 ntBASIC1.81□□□□□ -2.12
SF3B3Q15393 SNORD115-5-201ENST00000363633 82 ntBASIC1.81□□□□□ -2.12
SF3B3Q15393 SNORD115-39-201ENST00000363694 82 ntBASIC1.81□□□□□ -2.12
SF3B3Q15393 SNORD115-4-201ENST00000363810 82 ntBASIC1.81□□□□□ -2.12
SF3B3Q15393 SNORD115-16-201ENST00000363887 82 ntBASIC1.81□□□□□ -2.12
SF3B3Q15393 SNORD115-6-201ENST00000363942 82 ntBASIC1.81□□□□□ -2.12
SF3B3Q15393 SNORD115-42-201ENST00000364273 82 ntBASIC1.81□□□□□ -2.12
SF3B3Q15393 Y_RNA.241-201ENST00000364470 117 ntBASIC1.81□□□□□ -2.12
SF3B3Q15393 SNORD115-15-201ENST00000364809 81 ntBASIC1.81□□□□□ -2.12
SF3B3Q15393 RNU6-1325P-201ENST00000364905 105 ntBASIC1.81□□□□□ -2.12
SF3B3Q15393 SNORD115-1-201ENST00000364961 82 ntBASIC1.81□□□□□ -2.12
SF3B3Q15393 SNORD115-26-201ENST00000365067 82 ntBASIC1.81□□□□□ -2.12
SF3B3Q15393 SNORD115-10-201ENST00000365073 81 ntBASIC1.81□□□□□ -2.12
SF3B3Q15393 Y_RNA.351-201ENST00000365436 96 ntBASIC1.81□□□□□ -2.12
SF3B3Q15393 SNORD115-43-201ENST00000365503 82 ntBASIC1.81□□□□□ -2.12
SF3B3Q15393 Y_RNA.366-201ENST00000365540 102 ntBASIC1.81□□□□□ -2.12
SF3B3Q15393 SNORD115-36-201ENST00000365629 82 ntBASIC1.81□□□□□ -2.12
SF3B3Q15393 RNU6-203P-201ENST00000384038 104 ntBASIC1.81□□□□□ -2.12
SF3B3Q15393 RNU6-1144P-201ENST00000384247 104 ntBASIC1.81□□□□□ -2.12
SF3B3Q15393 SNORA27-201ENST00000384323 126 ntBASIC1.81□□□□□ -2.12
SF3B3Q15393 RNU6-476P-201ENST00000384726 107 ntBASIC1.81□□□□□ -2.12
SF3B3Q15393 MIR194-1-201ENST00000384892 85 ntBASIC1.81□□□□□ -2.12
SF3B3Q15393 MIR136-201ENST00000385207 82 ntBASIC1.81□□□□□ -2.12
SF3B3Q15393 SNORD115-40-201ENST00000606510 82 ntBASIC1.81□□□□□ -2.12
SF3B3Q15393 AC091932.4-201ENST00000623386 200 ntBASIC1.81□□□□□ -2.12
SF3B3Q15393 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
SF3B3Q15393 RNU6-1123P-201ENST00000362347 106 ntBASIC1.8□□□□□ -2.12
SF3B3Q15393 Y_RNA.81-201ENST00000362997 102 ntBASIC1.8□□□□□ -2.12
SF3B3Q15393 RNU6-429P-201ENST00000384582 108 ntBASIC1.8□□□□□ -2.12
SF3B3Q15393 MIR30A-201ENST00000385092 71 ntBASIC1.8□□□□□ -2.12
SF3B3Q15393 MIR1304-201ENST00000408243 91 ntBASIC1.8□□□□□ -2.12
SF3B3Q15393 MIR1267-201ENST00000408723 78 ntBASIC1.8□□□□□ -2.12
SF3B3Q15393 RNU7-80P-201ENST00000459562 61 ntBASIC1.8□□□□□ -2.12
SF3B3Q15393 RNU6-240P-201ENST00000516098 97 ntBASIC1.8□□□□□ -2.12
SF3B3Q15393 SNORD33.1-201ENST00000516213 88 ntBASIC1.8□□□□□ -2.12
SF3B3Q15393 AC090821.2-201ENST00000523552 176 ntBASIC1.8□□□□□ -2.12
SF3B3Q15393 AC025166.1-201ENST00000612411 163 ntBASIC1.8□□□□□ -2.12
SF3B3Q15393 AL137067.1-201ENST00000615933 120 ntBASIC1.8□□□□□ -2.12
SF3B3Q15393 RNU1-133P-201ENST00000364867 167 ntBASIC1.79□□□□□ -2.12
SF3B3Q15393 RNY1P6-201ENST00000384193 109 ntBASIC1.79□□□□□ -2.12
SF3B3Q15393 Y_RNA.454-201ENST00000384224 113 ntBASIC1.79□□□□□ -2.12
SF3B3Q15393 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SF3B3Q15393 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.79□□□□□ -2.12
SF3B3Q15393 RNU6-998P-201ENST00000515894 101 ntBASIC1.79□□□□□ -2.12
SF3B3Q15393 RNU6-970P-201ENST00000516312 107 ntBASIC1.79□□□□□ -2.12
SF3B3Q15393 RNU6-919P-201ENST00000516731 104 ntBASIC1.79□□□□□ -2.12
SF3B3Q15393 RNU7-70P-201ENST00000516941 66 ntBASIC1.79□□□□□ -2.12
SF3B3Q15393 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
SF3B3Q15393 Y_RNA.346-201ENST00000365385 112 ntBASIC1.78□□□□□ -2.12
SF3B3Q15393 RNU6-997P-201ENST00000384725 107 ntBASIC1.78□□□□□ -2.12
SF3B3Q15393 AL161935.2-201ENST00000414627 60 ntBASIC1.78□□□□□ -2.12
SF3B3Q15393 RNU7-96P-201ENST00000459535 64 ntBASIC1.78□□□□□ -2.12
SF3B3Q15393 RPS29P24-201ENST00000486345 171 ntBASIC1.78□□□□□ -2.12
SF3B3Q15393 RNU2-13P-201ENST00000515909 113 ntBASIC1.78□□□□□ -2.12
SF3B3Q15393 SNORA31.4-201ENST00000516049 129 ntBASIC1.78□□□□□ -2.12
SF3B3Q15393 AL670379.3-201ENST00000605040 251 ntBASIC1.78□□□□□ -2.12
SF3B3Q15393 MIR6129-201ENST00000616087 109 ntBASIC1.78□□□□□ -2.12
SF3B3Q15393 MTND5P18-201ENST00000445624 1801 ntBASIC1.77□□□□□ -2.13
SF3B3Q15393 AL596211.1-201ENST00000569873 2277 ntBASIC1.77□□□□□ -2.13
SF3B3Q15393 SNORA25.9-201ENST00000365087 128 ntBASIC1.77□□□□□ -2.13
SF3B3Q15393 SNORA1.2-201ENST00000365189 134 ntBASIC1.77□□□□□ -2.13
SF3B3Q15393 RNU6-690P-201ENST00000365242 106 ntBASIC1.77□□□□□ -2.13
SF3B3Q15393 Y_RNA.370-201ENST00000365589 108 ntBASIC1.77□□□□□ -2.13
SF3B3Q15393 MIR1276-201ENST00000408707 83 ntBASIC1.77□□□□□ -2.13
SF3B3Q15393 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.77□□□□□ -2.13
SF3B3Q15393 RNU1-98P-201ENST00000458992 160 ntBASIC1.77□□□□□ -2.13
SF3B3Q15393 SNORD123-201ENST00000459473 70 ntBASIC1.77□□□□□ -2.13
SF3B3Q15393 RNU1-92P-201ENST00000517017 135 ntBASIC1.77□□□□□ -2.13
SF3B3Q15393 MTND5P34-201ENST00000568888 325 ntBASIC1.77□□□□□ -2.13
SF3B3Q15393 AC095038.3-201ENST00000634439 195 ntBASIC1.77□□□□□ -2.13
SF3B3Q15393 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.76□□□□□ -2.13
SF3B3Q15393 SNORD28B-201ENST00000390993 75 ntBASIC1.76□□□□□ -2.13
SF3B3Q15393 MIR1263-201ENST00000408324 86 ntBASIC1.76□□□□□ -2.13
SF3B3Q15393 RNA5SP136-201ENST00000410906 107 ntBASIC1.76□□□□□ -2.13
SF3B3Q15393 AL035461.1-201ENST00000421490 332 ntBASIC1.76□□□□□ -2.13
SF3B3Q15393 RNU6-917P-201ENST00000516294 104 ntBASIC1.76□□□□□ -2.13
SF3B3Q15393 MIR548AR-201ENST00000582191 57 ntBASIC1.76□□□□□ -2.13
SF3B3Q15393 FAM106DP-201ENST00000586416 501 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms