Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 Y_RNA.294-201ENST00000364916 102 ntBASIC1.92□□□□□ -2.1
SSRP1Q08945 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.92□□□□□ -2.1
SSRP1Q08945 snoU13.16-201ENST00000459350 104 ntBASIC1.92□□□□□ -2.1
SSRP1Q08945 SNORA25.15-201ENST00000516487 89 ntBASIC1.92□□□□□ -2.1
SSRP1Q08945 MIR3664-201ENST00000579074 99 ntBASIC1.92□□□□□ -2.1
SSRP1Q08945 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.92□□□□□ -2.1
SSRP1Q08945 AL157777.2-201ENST00000258070 137 ntBASIC1.91□□□□□ -2.1
SSRP1Q08945 RNU6-647P-201ENST00000364243 107 ntBASIC1.91□□□□□ -2.1
SSRP1Q08945 Y_RNA.280-201ENST00000364765 112 ntBASIC1.91□□□□□ -2.1
SSRP1Q08945 SNORD113-1-201ENST00000365321 69 ntBASIC1.91□□□□□ -2.1
SSRP1Q08945 RPS27P16-201ENST00000425758 201 ntBASIC1.91□□□□□ -2.1
SSRP1Q08945 RNU6-947P-201ENST00000516264 106 ntBASIC1.91□□□□□ -2.1
SSRP1Q08945 AL512310.8-201ENST00000550183 120 ntBASIC1.91□□□□□ -2.1
SSRP1Q08945 MIR3192-201ENST00000584920 77 ntBASIC1.91□□□□□ -2.1
SSRP1Q08945 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
SSRP1Q08945 RNU6-349P-201ENST00000362402 107 ntBASIC1.9□□□□□ -2.11
SSRP1Q08945 RNU6-690P-201ENST00000365242 106 ntBASIC1.9□□□□□ -2.11
SSRP1Q08945 AL158147.1-201ENST00000443970 75 ntBASIC1.9□□□□□ -2.11
SSRP1Q08945 SNORA19-201ENST00000384737 128 ntBASIC1.89□□□□□ -2.11
SSRP1Q08945 RNU6-913P-201ENST00000390913 95 ntBASIC1.89□□□□□ -2.11
SSRP1Q08945 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.89□□□□□ -2.11
SSRP1Q08945 RNU6-902P-201ENST00000517212 91 ntBASIC1.89□□□□□ -2.11
SSRP1Q08945 MIR4255-201ENST00000579351 72 ntBASIC1.89□□□□□ -2.11
SSRP1Q08945 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
SSRP1Q08945 Y_RNA.164-201ENST00000363709 102 ntBASIC1.88□□□□□ -2.11
SSRP1Q08945 RNU6-80P-201ENST00000384195 107 ntBASIC1.88□□□□□ -2.11
SSRP1Q08945 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
SSRP1Q08945 RNA5SP261-201ENST00000410536 106 ntBASIC1.88□□□□□ -2.11
SSRP1Q08945 SNORA31.4-201ENST00000516049 129 ntBASIC1.88□□□□□ -2.11
SSRP1Q08945 RNU6-240P-201ENST00000516098 97 ntBASIC1.88□□□□□ -2.11
SSRP1Q08945 DNAJC19P9-201ENST00000555084 351 ntBASIC1.88□□□□□ -2.11
SSRP1Q08945 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.88□□□□□ -2.11
SSRP1Q08945 MIR3683-201ENST00000580847 82 ntBASIC1.88□□□□□ -2.11
SSRP1Q08945 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.87□□□□□ -2.11
SSRP1Q08945 Y_RNA.4-201ENST00000362333 112 ntBASIC1.87□□□□□ -2.11
SSRP1Q08945 Y_RNA.71-201ENST00000362892 104 ntBASIC1.87□□□□□ -2.11
SSRP1Q08945 Y_RNA.218-201ENST00000364218 104 ntBASIC1.87□□□□□ -2.11
SSRP1Q08945 RNU6-1117P-201ENST00000384525 104 ntBASIC1.87□□□□□ -2.11
SSRP1Q08945 AC133485.4-201ENST00000561835 220 ntBASIC1.87□□□□□ -2.11
SSRP1Q08945 AC138907.4-201ENST00000570107 226 ntBASIC1.87□□□□□ -2.11
SSRP1Q08945 AC108081.1-201ENST00000604358 221 ntBASIC1.87□□□□□ -2.11
SSRP1Q08945 AL020996.3-201ENST00000606617 222 ntBASIC1.87□□□□□ -2.11
SSRP1Q08945 AL121890.5-201ENST00000620848 304 ntBASIC1.87□□□□□ -2.11
SSRP1Q08945 AC021613.1-201ENST00000623880 111 ntBASIC1.87□□□□□ -2.11
SSRP1Q08945 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
SSRP1Q08945 RNU6-235P-201ENST00000362644 107 ntBASIC1.86□□□□□ -2.11
SSRP1Q08945 RNA5SP247-201ENST00000411181 105 ntBASIC1.86□□□□□ -2.11
SSRP1Q08945 AC009474.2-201ENST00000451383 136 ntBASIC1.86□□□□□ -2.11
SSRP1Q08945 RNU6-1234P-201ENST00000516877 103 ntBASIC1.86□□□□□ -2.11
SSRP1Q08945 RNU6-165P-201ENST00000517170 99 ntBASIC1.86□□□□□ -2.11
SSRP1Q08945 MIR3152-201ENST00000579801 74 ntBASIC1.86□□□□□ -2.11
SSRP1Q08945 U2.22-201ENST00000636441 106 ntBASIC1.86□□□□□ -2.11
SSRP1Q08945 RNU4-16P-201ENST00000364737 141 ntBASIC1.85□□□□□ -2.11
SSRP1Q08945 RNU6-1319P-201ENST00000390855 104 ntBASIC1.85□□□□□ -2.11
SSRP1Q08945 RNU6-747P-201ENST00000390928 104 ntBASIC1.85□□□□□ -2.11
SSRP1Q08945 RNU6-241P-201ENST00000391148 104 ntBASIC1.85□□□□□ -2.11
SSRP1Q08945 RNU6-177P-201ENST00000411257 104 ntBASIC1.85□□□□□ -2.11
SSRP1Q08945 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.85□□□□□ -2.11
SSRP1Q08945 AL606753.1-201ENST00000427435 87 ntBASIC1.85□□□□□ -2.11
SSRP1Q08945 AC108667.1-201ENST00000428618 249 ntBASIC1.85□□□□□ -2.11
SSRP1Q08945 RNU7-45P-201ENST00000459460 63 ntBASIC1.85□□□□□ -2.11
SSRP1Q08945 AL133373.1-201ENST00000497098 94 ntBASIC1.85□□□□□ -2.11
SSRP1Q08945 MIR3122-201ENST00000577243 73 ntBASIC1.85□□□□□ -2.11
SSRP1Q08945 MIR548AO-201ENST00000579992 96 ntBASIC1.85□□□□□ -2.11
SSRP1Q08945 MIR4285-201ENST00000581001 85 ntBASIC1.85□□□□□ -2.11
SSRP1Q08945 HSPE1P19-201ENST00000603327 295 ntBASIC1.85□□□□□ -2.11
SSRP1Q08945 AL137067.1-201ENST00000615933 120 ntBASIC1.85□□□□□ -2.11
SSRP1Q08945 RNA5SP363-201ENST00000365072 115 ntBASIC1.84□□□□□ -2.11
SSRP1Q08945 RNA5SP190-201ENST00000365222 118 ntBASIC1.84□□□□□ -2.11
SSRP1Q08945 Y_RNA.366-201ENST00000365540 102 ntBASIC1.84□□□□□ -2.11
SSRP1Q08945 SNORD116-14-201ENST00000383894 92 ntBASIC1.84□□□□□ -2.11
SSRP1Q08945 SNORD116-17-201ENST00000383929 92 ntBASIC1.84□□□□□ -2.11
SSRP1Q08945 SNORD116-15-201ENST00000384445 92 ntBASIC1.84□□□□□ -2.11
SSRP1Q08945 SNORD116-19-201ENST00000384729 92 ntBASIC1.84□□□□□ -2.11
SSRP1Q08945 RNU6-1190P-201ENST00000410811 104 ntBASIC1.84□□□□□ -2.11
SSRP1Q08945 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.84□□□□□ -2.11
SSRP1Q08945 RPL31P63-201ENST00000422565 375 ntBASIC1.84□□□□□ -2.11
SSRP1Q08945 AC008267.6-201ENST00000441664 139 ntBASIC1.84□□□□□ -2.11
SSRP1Q08945 AC108729.3-201ENST00000513484 108 ntBASIC1.84□□□□□ -2.11
SSRP1Q08945 RN7SKP88-201ENST00000516847 250 ntBASIC1.84□□□□□ -2.11
SSRP1Q08945 MIR8055-201ENST00000610739 97 ntBASIC1.84□□□□□ -2.11
SSRP1Q08945 7SK.8-201ENST00000612110 250 ntBASIC1.84□□□□□ -2.11
SSRP1Q08945 7SK.11-201ENST00000615477 250 ntBASIC1.84□□□□□ -2.11
SSRP1Q08945 7SK.13-201ENST00000622040 250 ntBASIC1.84□□□□□ -2.11
SSRP1Q08945 MIR6717-201ENST00000622747 73 ntBASIC1.84□□□□□ -2.11
SSRP1Q08945 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
SSRP1Q08945 SNORA1.1-201ENST00000364671 133 ntBASIC1.83□□□□□ -2.12
SSRP1Q08945 SNORA26.6-201ENST00000391256 115 ntBASIC1.83□□□□□ -2.12
SSRP1Q08945 Y_RNA.617-201ENST00000410920 90 ntBASIC1.83□□□□□ -2.12
SSRP1Q08945 snoU13.25-201ENST00000458945 104 ntBASIC1.83□□□□□ -2.12
SSRP1Q08945 RN7SKP19-201ENST00000516016 252 ntBASIC1.83□□□□□ -2.12
SSRP1Q08945 RN7SKP179-201ENST00000516126 217 ntBASIC1.83□□□□□ -2.12
SSRP1Q08945 RNU6-62P-201ENST00000516526 102 ntBASIC1.83□□□□□ -2.12
SSRP1Q08945 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.83□□□□□ -2.12
SSRP1Q08945 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.83□□□□□ -2.12
SSRP1Q08945 MIR4498-201ENST00000577599 66 ntBASIC1.83□□□□□ -2.12
SSRP1Q08945 AC021443.1-201ENST00000604478 211 ntBASIC1.83□□□□□ -2.12
SSRP1Q08945 Z97988.1-201ENST00000637697 135 ntBASIC1.83□□□□□ -2.12
SSRP1Q08945 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.83□□□□□ -2.12
SSRP1Q08945 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms