Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 RNU6-453P-201ENST00000516819 85 ntBASIC0.6□□□□□ -2.31
GABPAQ06546 MIR4771-2-201ENST00000577758 74 ntBASIC0.6□□□□□ -2.31
GABPAQ06546 MIR4771-1-201ENST00000582617 74 ntBASIC0.6□□□□□ -2.31
GABPAQ06546 MIR8055-201ENST00000610739 97 ntBASIC0.6□□□□□ -2.31
GABPAQ06546 U2.14-201ENST00000615943 113 ntBASIC0.6□□□□□ -2.31
GABPAQ06546 MIR8062-201ENST00000621515 85 ntBASIC0.6□□□□□ -2.31
GABPAQ06546 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
GABPAQ06546 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
GABPAQ06546 MIR335-201ENST00000362173 94 ntBASIC0.59□□□□□ -2.31
GABPAQ06546 Y_RNA.82-201ENST00000363000 102 ntBASIC0.59□□□□□ -2.31
GABPAQ06546 Y_RNA.92-201ENST00000363043 102 ntBASIC0.59□□□□□ -2.31
GABPAQ06546 RNU6-1309P-201ENST00000363305 108 ntBASIC0.59□□□□□ -2.31
GABPAQ06546 Y_RNA.235-201ENST00000364412 102 ntBASIC0.59□□□□□ -2.31
GABPAQ06546 Y_RNA.306-201ENST00000365015 102 ntBASIC0.59□□□□□ -2.31
GABPAQ06546 Y_RNA.312-201ENST00000365089 102 ntBASIC0.59□□□□□ -2.31
GABPAQ06546 Y_RNA.322-201ENST00000365151 102 ntBASIC0.59□□□□□ -2.31
GABPAQ06546 RNY3P5-201ENST00000384127 102 ntBASIC0.59□□□□□ -2.31
GABPAQ06546 Y_RNA.483-201ENST00000384380 101 ntBASIC0.59□□□□□ -2.31
GABPAQ06546 MT-TW-201ENST00000387382 68 ntBASIC0.59□□□□□ -2.31
GABPAQ06546 HMGN1P33-201ENST00000432945 451 ntBASIC0.59□□□□□ -2.31
GABPAQ06546 Y_RNA.650-201ENST00000459002 102 ntBASIC0.59□□□□□ -2.31
GABPAQ06546 Y_RNA.777-201ENST00000516982 102 ntBASIC0.59□□□□□ -2.31
GABPAQ06546 Y_RNA.771-201ENST00000598668 102 ntBASIC0.59□□□□□ -2.31
GABPAQ06546 AL365265.1-201ENST00000621045 234 ntBASIC0.59□□□□□ -2.31
GABPAQ06546 AC243829.3-201ENST00000622177 108 ntBASIC0.59□□□□□ -2.31
GABPAQ06546 Y_RNA.789-201ENST00000622480 102 ntBASIC0.59□□□□□ -2.31
GABPAQ06546 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.59□□□□□ -2.31
GABPAQ06546 AL589743.1-201ENST00000551932 2712 ntBASIC0.58□□□□□ -2.32
GABPAQ06546 Y_RNA.66-201ENST00000362862 102 ntBASIC0.58□□□□□ -2.32
GABPAQ06546 SNORA36.2-201ENST00000384004 127 ntBASIC0.58□□□□□ -2.32
GABPAQ06546 Y_RNA.416-201ENST00000384014 113 ntBASIC0.58□□□□□ -2.32
GABPAQ06546 RNU6-484P-201ENST00000384016 107 ntBASIC0.58□□□□□ -2.32
GABPAQ06546 RNU6-733P-201ENST00000410759 104 ntBASIC0.58□□□□□ -2.32
GABPAQ06546 SNORD2.1-201ENST00000458762 69 ntBASIC0.58□□□□□ -2.32
GABPAQ06546 RNU2-11P-201ENST00000459191 187 ntBASIC0.58□□□□□ -2.32
GABPAQ06546 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.58□□□□□ -2.32
GABPAQ06546 RNA5SP153-201ENST00000516498 76 ntBASIC0.58□□□□□ -2.32
GABPAQ06546 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
GABPAQ06546 AL442663.2-201ENST00000554385 511 ntBASIC0.58□□□□□ -2.32
GABPAQ06546 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.58□□□□□ -2.32
GABPAQ06546 RNU6-369P-201ENST00000362515 102 ntBASIC0.57□□□□□ -2.32
GABPAQ06546 SNORA1.1-201ENST00000364671 133 ntBASIC0.57□□□□□ -2.32
GABPAQ06546 RNU6-1189P-201ENST00000383958 107 ntBASIC0.57□□□□□ -2.32
GABPAQ06546 Y_RNA.410-201ENST00000383992 113 ntBASIC0.57□□□□□ -2.32
GABPAQ06546 RNU6-1160P-201ENST00000384546 104 ntBASIC0.57□□□□□ -2.32
GABPAQ06546 MIR520H-201ENST00000385126 88 ntBASIC0.57□□□□□ -2.32
GABPAQ06546 MIR616-201ENST00000385293 97 ntBASIC0.57□□□□□ -2.32
GABPAQ06546 RNU6-1228P-201ENST00000391014 107 ntBASIC0.57□□□□□ -2.32
GABPAQ06546 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.57□□□□□ -2.32
GABPAQ06546 RNU6-229P-201ENST00000516614 102 ntBASIC0.57□□□□□ -2.32
GABPAQ06546 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.57□□□□□ -2.32
GABPAQ06546 AC008737.2-201ENST00000599446 118 ntBASIC0.57□□□□□ -2.32
GABPAQ06546 Z97988.1-201ENST00000637697 135 ntBASIC0.57□□□□□ -2.32
GABPAQ06546 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.57□□□□□ -2.32
GABPAQ06546 Y_RNA.36-201ENST00000362602 112 ntBASIC0.56□□□□□ -2.32
GABPAQ06546 SNORA63C-201ENST00000364578 129 ntBASIC0.56□□□□□ -2.32
GABPAQ06546 Y_RNA.304-201ENST00000365011 112 ntBASIC0.56□□□□□ -2.32
GABPAQ06546 Y_RNA.326-201ENST00000365176 113 ntBASIC0.56□□□□□ -2.32
GABPAQ06546 Y_RNA.574-201ENST00000384766 95 ntBASIC0.56□□□□□ -2.32
GABPAQ06546 MIR606-201ENST00000384851 96 ntBASIC0.56□□□□□ -2.32
GABPAQ06546 MIR7-2-201ENST00000384970 110 ntBASIC0.56□□□□□ -2.32
GABPAQ06546 SNORD77.3-201ENST00000391113 65 ntBASIC0.56□□□□□ -2.32
GABPAQ06546 RNU7-96P-201ENST00000459535 64 ntBASIC0.56□□□□□ -2.32
GABPAQ06546 MIR6779-201ENST00000617283 64 ntBASIC0.56□□□□□ -2.32
GABPAQ06546 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
GABPAQ06546 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
GABPAQ06546 Y_RNA.54-201ENST00000362766 105 ntBASIC0.55□□□□□ -2.32
GABPAQ06546 SNORA63-201ENST00000363450 132 ntBASIC0.55□□□□□ -2.32
GABPAQ06546 Y_RNA.176-201ENST00000363815 109 ntBASIC0.55□□□□□ -2.32
GABPAQ06546 MIR588-201ENST00000384900 83 ntBASIC0.55□□□□□ -2.32
GABPAQ06546 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.55□□□□□ -2.32
GABPAQ06546 MIR4676-201ENST00000583078 72 ntBASIC0.55□□□□□ -2.32
GABPAQ06546 AC020891.4-201ENST00000605745 93 ntBASIC0.55□□□□□ -2.32
GABPAQ06546 uc_338.6-201ENST00000613544 171 ntBASIC0.55□□□□□ -2.32
GABPAQ06546 MIR6740-201ENST00000618268 113 ntBASIC0.55□□□□□ -2.32
GABPAQ06546 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
GABPAQ06546 AC010332.2-201ENST00000613083 1904 ntBASIC0.54□□□□□ -2.32
GABPAQ06546 MIR302B-201ENST00000362188 73 ntBASIC0.54□□□□□ -2.32
GABPAQ06546 Y_RNA.351-201ENST00000365436 96 ntBASIC0.54□□□□□ -2.32
GABPAQ06546 SNORA1-201ENST00000384107 130 ntBASIC0.54□□□□□ -2.32
GABPAQ06546 Y_RNA.440-201ENST00000384120 114 ntBASIC0.54□□□□□ -2.32
GABPAQ06546 RNY1P4-201ENST00000384595 115 ntBASIC0.54□□□□□ -2.32
GABPAQ06546 RNU6-1190P-201ENST00000410811 104 ntBASIC0.54□□□□□ -2.32
GABPAQ06546 RNU6-602P-201ENST00000411155 105 ntBASIC0.54□□□□□ -2.32
GABPAQ06546 AL157398.1-201ENST00000452981 186 ntBASIC0.54□□□□□ -2.32
GABPAQ06546 RNU6-998P-201ENST00000515894 101 ntBASIC0.54□□□□□ -2.32
GABPAQ06546 RNU4-54P-201ENST00000516428 129 ntBASIC0.54□□□□□ -2.32
GABPAQ06546 MIR4804-201ENST00000581683 73 ntBASIC0.54□□□□□ -2.32
GABPAQ06546 MIR4282-201ENST00000583613 67 ntBASIC0.54□□□□□ -2.32
GABPAQ06546 Z83818.1-201ENST00000603584 150 ntBASIC0.54□□□□□ -2.32
GABPAQ06546 Y_RNA.23-201ENST00000362496 106 ntBASIC0.53□□□□□ -2.32
GABPAQ06546 Y_RNA.277-201ENST00000364754 102 ntBASIC0.53□□□□□ -2.32
GABPAQ06546 SNORA79-201ENST00000408376 140 ntBASIC0.53□□□□□ -2.32
GABPAQ06546 MIR548I3-201ENST00000408378 149 ntBASIC0.53□□□□□ -2.32
GABPAQ06546 AC114737.2-201ENST00000421583 173 ntBASIC0.53□□□□□ -2.32
GABPAQ06546 RNU6-561P-201ENST00000516222 102 ntBASIC0.53□□□□□ -2.32
GABPAQ06546 RNA5SP121-201ENST00000516537 101 ntBASIC0.53□□□□□ -2.32
GABPAQ06546 MIR4643-201ENST00000577473 78 ntBASIC0.53□□□□□ -2.32
GABPAQ06546 Y_RNA.812-201ENST00000610788 101 ntBASIC0.53□□□□□ -2.32
GABPAQ06546 Y_RNA.784-201ENST00000613803 101 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms