Protein–RNA interactions for Protein: Q02388

COL7A1, Collagen alpha-1(VII) chain, humanhuman

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1Q02388 MIR4509-3-201ENST00000578671 94 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 MIR4509-2-201ENST00000583920 94 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 CLPTM1LP1-201ENST00000604519 484 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 MIR4509-1-201ENST00000618224 94 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 AC072046.2-201ENST00000618366 268 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 AC093726.3-201ENST00000637588 150 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 SNORD114-7-201ENST00000362520 77 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 Y_RNA.341-201ENST00000365341 102 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 RNU4-20P-201ENST00000365601 151 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 SNORD63-201ENST00000384262 68 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 RNU4-70P-201ENST00000384579 139 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 MIR548A2-201ENST00000384956 97 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 MIR181B2-201ENST00000385004 89 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 MIR652-201ENST00000385278 98 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 SNORD78.2-201ENST00000391076 69 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 RNU6-1050P-201ENST00000410388 107 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-0.24□□□□□ -2.45
COL7A1Q02388 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.24□□□□□ -2.45
COL7A1Q02388 RNU7-180P-201ENST00000459240 63 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 RPS29P24-201ENST00000486345 171 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 RNU6-1016P-201ENST00000516689 94 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 RNU6-175P-201ENST00000516896 107 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 snoU83B.1-201ENST00000517136 88 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 AC138749.4-201ENST00000563970 127 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-0.24□□□□□ -2.45
COL7A1Q02388 MIR3913-1-201ENST00000577744 102 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 MIR4424-201ENST00000585257 86 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 uc_338.19-201ENST00000616808 99 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 AC079248.2-201ENST00000623779 326 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 Y_RNA.97-201ENST00000363094 102 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 RNU6-595P-201ENST00000363944 107 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 RNU4-75P-201ENST00000364621 146 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 Y_RNA.310-201ENST00000365063 113 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 RNU6-429P-201ENST00000384582 108 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 RNU6-136P-201ENST00000384663 107 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 SNORA40.5-201ENST00000391061 128 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 RNU6-159P-201ENST00000391080 106 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-0.24□□□□□ -2.45
COL7A1Q02388 MIR548H3-201ENST00000408771 118 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 RNU2-66P-201ENST00000410650 161 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 AL353193.1-201ENST00000421444 268 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 MTND3P1-201ENST00000441336 220 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 AL033528.1-201ENST00000453780 140 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 SNORA13-201ENST00000458790 133 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 SCARNA18B-201ENST00000458806 135 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 RNU7-134P-201ENST00000458997 64 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 RNU7-113P-201ENST00000459273 62 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 MIR1270-201ENST00000459320 83 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 RNU6-261P-201ENST00000459506 102 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-0.24□□□□□ -2.45
COL7A1Q02388 PRDX4P1-201ENST00000507189 574 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 AC011352.1-201ENST00000512300 793 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-0.24□□□□□ -2.45
COL7A1Q02388 ACA59.1-201ENST00000515966 143 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 SNORA25.13-201ENST00000516395 103 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 RNU6-759P-201ENST00000516740 103 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 MIR548AG2-201ENST00000581228 64 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 MIR3941-201ENST00000582572 103 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 AP001330.5-201ENST00000607176 411 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 RNU7-10P-201ENST00000607194 63 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 AC011373.1-201ENST00000607270 237 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 AC126544.2-201ENST00000625174 749 ntBASIC-0.24□□□□□ -2.45
COL7A1Q02388 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 RNU6-128P-201ENST00000383976 107 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 Y_RNA.405-201ENST00000383979 100 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 Y_RNA.451-201ENST00000384200 100 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 Y_RNA.524-201ENST00000384564 100 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 Y_RNA.561-201ENST00000384694 100 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 MIR588-201ENST00000384900 83 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 MIR8485-201ENST00000401372 91 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 RNU6-588P-201ENST00000410281 105 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 RNU6-130P-201ENST00000411112 103 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 MTATP6P13-201ENST00000438531 667 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 AC098826.2-201ENST00000452011 651 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 AC010598.1-201ENST00000510378 103 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 RNU6-273P-201ENST00000516937 96 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 MTND4P7-201ENST00000523876 130 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 AC127455.1-201ENST00000565496 145 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 MIR4528-201ENST00000577763 90 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 POLR3GP2-201ENST00000588366 668 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 AC040904.1-201ENST00000590850 223 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 VTRNA2-1-201ENST00000602301 127 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 AL121655.1-201ENST00000605811 308 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 AL442067.1-201ENST00000613261 223 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 AC013791.1-201ENST00000616619 62 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.25□□□□□ -2.45
COL7A1Q02388 Y_RNA.66-201ENST00000362862 102 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 RNU6-961P-201ENST00000363893 105 ntBASIC-0.25□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 255.3 ms