Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AP000753.3-201ENST00000604083 169 ntBASIC0.9□□□□□ -2.27
CDK3Q00526 AC211469.2-201ENST00000605461 205 ntBASIC0.9□□□□□ -2.27
CDK3Q00526 AC103810.9-201ENST00000606688 112 ntBASIC0.9□□□□□ -2.27
CDK3Q00526 AC108706.1-201ENST00000611053 297 ntBASIC0.9□□□□□ -2.27
CDK3Q00526 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
CDK3Q00526 RNU6-125P-201ENST00000384505 107 ntBASIC0.89□□□□□ -2.27
CDK3Q00526 Y_RNA.571-201ENST00000384753 98 ntBASIC0.89□□□□□ -2.27
CDK3Q00526 RNU6-913P-201ENST00000390913 95 ntBASIC0.89□□□□□ -2.27
CDK3Q00526 SNORD77.3-201ENST00000391113 65 ntBASIC0.89□□□□□ -2.27
CDK3Q00526 AC090844.1-201ENST00000422019 156 ntBASIC0.89□□□□□ -2.27
CDK3Q00526 AL035398.1-201ENST00000430869 322 ntBASIC0.89□□□□□ -2.27
CDK3Q00526 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.89□□□□□ -2.27
CDK3Q00526 AC004817.2-201ENST00000561794 651 ntBASIC0.89□□□□□ -2.27
CDK3Q00526 MIR342-201ENST00000362212 99 ntBASIC0.88□□□□□ -2.27
CDK3Q00526 Y_RNA.121-201ENST00000363309 113 ntBASIC0.88□□□□□ -2.27
CDK3Q00526 Y_RNA.168-201ENST00000363740 102 ntBASIC0.88□□□□□ -2.27
CDK3Q00526 Y_RNA.182-201ENST00000363880 111 ntBASIC0.88□□□□□ -2.27
CDK3Q00526 Y_RNA.440-201ENST00000384120 114 ntBASIC0.88□□□□□ -2.27
CDK3Q00526 RNU4-70P-201ENST00000384579 139 ntBASIC0.88□□□□□ -2.27
CDK3Q00526 Y_RNA.542-201ENST00000384641 111 ntBASIC0.88□□□□□ -2.27
CDK3Q00526 MT-TN-201ENST00000387400 73 ntBASIC0.88□□□□□ -2.27
CDK3Q00526 RNU6-205P-201ENST00000390858 107 ntBASIC0.88□□□□□ -2.27
CDK3Q00526 RPS3AP1-201ENST00000413190 320 ntBASIC0.88□□□□□ -2.27
CDK3Q00526 AC067940.1-201ENST00000458411 300 ntBASIC0.88□□□□□ -2.27
CDK3Q00526 RNU7-96P-201ENST00000459535 64 ntBASIC0.88□□□□□ -2.27
CDK3Q00526 RPS29P1-201ENST00000465274 159 ntBASIC0.88□□□□□ -2.27
CDK3Q00526 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
CDK3Q00526 AL020996.3-201ENST00000606617 222 ntBASIC0.88□□□□□ -2.27
CDK3Q00526 Y_RNA.116-201ENST00000363292 103 ntBASIC0.87□□□□□ -2.27
CDK3Q00526 SNORD89-201ENST00000390981 114 ntBASIC0.87□□□□□ -2.27
CDK3Q00526 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.87□□□□□ -2.27
CDK3Q00526 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.87□□□□□ -2.27
CDK3Q00526 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.87□□□□□ -2.27
CDK3Q00526 RNU2-11P-201ENST00000459191 187 ntBASIC0.87□□□□□ -2.27
CDK3Q00526 RNU6-998P-201ENST00000515894 101 ntBASIC0.87□□□□□ -2.27
CDK3Q00526 RNA5SP255-201ENST00000516370 107 ntBASIC0.87□□□□□ -2.27
CDK3Q00526 MIR4698-201ENST00000577795 80 ntBASIC0.87□□□□□ -2.27
CDK3Q00526 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.87□□□□□ -2.27
CDK3Q00526 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
CDK3Q00526 RNY1-201ENST00000364228 113 ntBASIC0.86□□□□□ -2.27
CDK3Q00526 POLR2J4-204ENST00000418424 324 ntBASIC0.86□□□□□ -2.27
CDK3Q00526 HMGN1P33-201ENST00000432945 451 ntBASIC0.86□□□□□ -2.27
CDK3Q00526 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.86□□□□□ -2.27
CDK3Q00526 SNORD116-25-201ENST00000516517 92 ntBASIC0.86□□□□□ -2.27
CDK3Q00526 MIR4264-201ENST00000583520 66 ntBASIC0.86□□□□□ -2.27
CDK3Q00526 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.86□□□□□ -2.27
CDK3Q00526 MIR377-201ENST00000362145 69 ntBASIC0.85□□□□□ -2.27
CDK3Q00526 Y_RNA.351-201ENST00000365436 96 ntBASIC0.85□□□□□ -2.27
CDK3Q00526 SNORD38B-201ENST00000384690 67 ntBASIC0.85□□□□□ -2.27
CDK3Q00526 MIR548I3-201ENST00000408378 149 ntBASIC0.85□□□□□ -2.27
CDK3Q00526 Y_RNA.618-201ENST00000410949 107 ntBASIC0.85□□□□□ -2.27
CDK3Q00526 U7.7-201ENST00000459276 60 ntBASIC0.85□□□□□ -2.27
CDK3Q00526 ACA64.5-201ENST00000516207 127 ntBASIC0.85□□□□□ -2.27
CDK3Q00526 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.85□□□□□ -2.27
CDK3Q00526 MIR378D2-201ENST00000580636 98 ntBASIC0.85□□□□□ -2.27
CDK3Q00526 FAM71BP1-201ENST00000604431 523 ntBASIC0.85□□□□□ -2.27
CDK3Q00526 MIR8055-201ENST00000610739 97 ntBASIC0.85□□□□□ -2.27
CDK3Q00526 SNORD38B-202ENST00000625943 69 ntBASIC0.85□□□□□ -2.27
CDK3Q00526 MIR376A2-201ENST00000636782 80 ntBASIC0.85□□□□□ -2.27
CDK3Q00526 Z97988.1-201ENST00000637697 135 ntBASIC0.85□□□□□ -2.27
CDK3Q00526 MIR302B-201ENST00000362188 73 ntBASIC0.84□□□□□ -2.27
CDK3Q00526 Y_RNA.83-201ENST00000363005 113 ntBASIC0.84□□□□□ -2.27
CDK3Q00526 Y_RNA.200-201ENST00000364018 102 ntBASIC0.84□□□□□ -2.27
CDK3Q00526 SNORA1.1-201ENST00000364671 133 ntBASIC0.84□□□□□ -2.27
CDK3Q00526 RNU6-1335P-201ENST00000365426 107 ntBASIC0.84□□□□□ -2.27
CDK3Q00526 Y_RNA.489-201ENST00000384410 101 ntBASIC0.84□□□□□ -2.27
CDK3Q00526 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.84□□□□□ -2.27
CDK3Q00526 AC244023.1-201ENST00000426884 112 ntBASIC0.84□□□□□ -2.27
CDK3Q00526 MIR5197-201ENST00000583721 112 ntBASIC0.84□□□□□ -2.27
CDK3Q00526 AL365205.2-201ENST00000594586 68 ntBASIC0.84□□□□□ -2.27
CDK3Q00526 AC242498.1-201ENST00000604134 111 ntBASIC0.84□□□□□ -2.27
CDK3Q00526 MIR411-201ENST00000362239 96 ntBASIC0.83□□□□□ -2.28
CDK3Q00526 RNU6-1187P-201ENST00000364771 110 ntBASIC0.83□□□□□ -2.28
CDK3Q00526 RNU6-275P-201ENST00000364910 107 ntBASIC0.83□□□□□ -2.28
CDK3Q00526 RNU1-36P-201ENST00000365130 165 ntBASIC0.83□□□□□ -2.28
CDK3Q00526 RNU6-580P-201ENST00000365159 107 ntBASIC0.83□□□□□ -2.28
CDK3Q00526 RNU6-1292P-201ENST00000383856 107 ntBASIC0.83□□□□□ -2.28
CDK3Q00526 RNU6-643P-201ENST00000384018 107 ntBASIC0.83□□□□□ -2.28
CDK3Q00526 MIR518E-201ENST00000385252 88 ntBASIC0.83□□□□□ -2.28
CDK3Q00526 RNU6-1190P-201ENST00000410811 104 ntBASIC0.83□□□□□ -2.28
CDK3Q00526 SEPT7P4-201ENST00000437076 306 ntBASIC0.83□□□□□ -2.28
CDK3Q00526 RNU6-1110P-201ENST00000516462 101 ntBASIC0.83□□□□□ -2.28
CDK3Q00526 MIR6788-201ENST00000618842 66 ntBASIC0.83□□□□□ -2.28
CDK3Q00526 RNU6-978P-201ENST00000364371 103 ntBASIC0.82□□□□□ -2.28
CDK3Q00526 Y_RNA.412-201ENST00000384001 104 ntBASIC0.82□□□□□ -2.28
CDK3Q00526 RNU6-918P-201ENST00000391219 106 ntBASIC0.82□□□□□ -2.28
CDK3Q00526 RNU7-62P-201ENST00000458856 62 ntBASIC0.82□□□□□ -2.28
CDK3Q00526 snoU13.21-201ENST00000459368 105 ntBASIC0.82□□□□□ -2.28
CDK3Q00526 RNU7-80P-201ENST00000459562 61 ntBASIC0.82□□□□□ -2.28
CDK3Q00526 MIR151B-201ENST00000584249 96 ntBASIC0.82□□□□□ -2.28
CDK3Q00526 SNORA4-201ENST00000584302 138 ntBASIC0.82□□□□□ -2.28
CDK3Q00526 AL078603.1-201ENST00000603824 313 ntBASIC0.82□□□□□ -2.28
CDK3Q00526 AL136317.1-201ENST00000612653 226 ntBASIC0.82□□□□□ -2.28
CDK3Q00526 U6.106-201ENST00000636360 105 ntBASIC0.82□□□□□ -2.28
CDK3Q00526 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
CDK3Q00526 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
CDK3Q00526 MIR1-1-201ENST00000362147 71 ntBASIC0.81□□□□□ -2.28
CDK3Q00526 MIR100-201ENST00000385259 80 ntBASIC0.81□□□□□ -2.28
CDK3Q00526 MIR548J-201ENST00000408833 112 ntBASIC0.81□□□□□ -2.28
CDK3Q00526 AC006461.1-201ENST00000412637 326 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms