Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AL049861.1-201ENST00000603130 150 ntBASIC-1.13□□□□□ -2.59
H3F3AP84243 AC092794.2-201ENST00000620933 563 ntBASIC-1.13□□□□□ -2.59
H3F3AP84243 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.14□□□□□ -2.59
H3F3AP84243 SNORD61-201ENST00000384252 73 ntBASIC-1.14□□□□□ -2.59
H3F3AP84243 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.14□□□□□ -2.59
H3F3AP84243 SNORD78.2-201ENST00000391076 69 ntBASIC-1.14□□□□□ -2.59
H3F3AP84243 RNU6-908P-201ENST00000410160 94 ntBASIC-1.14□□□□□ -2.59
H3F3AP84243 AF228730.3-201ENST00000436691 102 ntBASIC-1.14□□□□□ -2.59
H3F3AP84243 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-1.14□□□□□ -2.59
H3F3AP84243 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.14□□□□□ -2.59
H3F3AP84243 MIR3145-201ENST00000580727 82 ntBASIC-1.14□□□□□ -2.59
H3F3AP84243 AL359880.1-201ENST00000621879 266 ntBASIC-1.14□□□□□ -2.59
H3F3AP84243 RNU6-451P-201ENST00000362921 107 ntBASIC-1.15□□□□□ -2.59
H3F3AP84243 RNU1-141P-201ENST00000364623 158 ntBASIC-1.15□□□□□ -2.59
H3F3AP84243 MIR539-201ENST00000365690 78 ntBASIC-1.15□□□□□ -2.59
H3F3AP84243 RNU6-483P-201ENST00000384088 108 ntBASIC-1.15□□□□□ -2.59
H3F3AP84243 RNU6-1013P-201ENST00000384180 107 ntBASIC-1.15□□□□□ -2.59
H3F3AP84243 RNU6-721P-201ENST00000410155 105 ntBASIC-1.15□□□□□ -2.59
H3F3AP84243 MIR4790-201ENST00000577799 79 ntBASIC-1.15□□□□□ -2.59
H3F3AP84243 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.15□□□□□ -2.59
H3F3AP84243 MIR548AE1-201ENST00000583292 70 ntBASIC-1.15□□□□□ -2.59
H3F3AP84243 AL021707.8-201ENST00000609428 183 ntBASIC-1.15□□□□□ -2.59
H3F3AP84243 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.15□□□□□ -2.59
H3F3AP84243 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.16□□□□□ -2.6
H3F3AP84243 Y_RNA.440-201ENST00000384120 114 ntBASIC-1.16□□□□□ -2.6
H3F3AP84243 Y_RNA.471-201ENST00000384312 102 ntBASIC-1.16□□□□□ -2.6
H3F3AP84243 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.16□□□□□ -2.6
H3F3AP84243 SNORA69.1-201ENST00000390904 137 ntBASIC-1.16□□□□□ -2.6
H3F3AP84243 RNU6-1050P-201ENST00000410388 107 ntBASIC-1.16□□□□□ -2.6
H3F3AP84243 RNU4-63P-201ENST00000411313 118 ntBASIC-1.16□□□□□ -2.6
H3F3AP84243 AP001328.1-201ENST00000528550 176 ntBASIC-1.16□□□□□ -2.6
H3F3AP84243 MIR3920-201ENST00000581751 86 ntBASIC-1.16□□□□□ -2.6
H3F3AP84243 AC093424.1-201ENST00000604999 338 ntBASIC-1.16□□□□□ -2.6
H3F3AP84243 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.17□□□□□ -2.6
H3F3AP84243 SNORD114-29-201ENST00000364819 70 ntBASIC-1.17□□□□□ -2.6
H3F3AP84243 RNY1P2-201ENST00000364820 117 ntBASIC-1.17□□□□□ -2.6
H3F3AP84243 Y_RNA.570-201ENST00000384750 101 ntBASIC-1.17□□□□□ -2.6
H3F3AP84243 RNU6-383P-201ENST00000410864 94 ntBASIC-1.17□□□□□ -2.6
H3F3AP84243 RNA5SP476-201ENST00000516613 103 ntBASIC-1.17□□□□□ -2.6
H3F3AP84243 SNORA27.4-201ENST00000516650 95 ntBASIC-1.17□□□□□ -2.6
H3F3AP84243 RNU6-1016P-201ENST00000516689 94 ntBASIC-1.17□□□□□ -2.6
H3F3AP84243 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.17□□□□□ -2.6
H3F3AP84243 YWHAEP2-201ENST00000580066 112 ntBASIC-1.17□□□□□ -2.6
H3F3AP84243 MIR548AX-201ENST00000580117 73 ntBASIC-1.17□□□□□ -2.6
H3F3AP84243 MIR4659A-201ENST00000580269 81 ntBASIC-1.17□□□□□ -2.6
H3F3AP84243 DLEU2_1.1-201ENST00000612089 120 ntBASIC-1.17□□□□□ -2.6
H3F3AP84243 DLEU2_1.2-201ENST00000614667 120 ntBASIC-1.17□□□□□ -2.6
H3F3AP84243 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.18□□□□□ -2.6
H3F3AP84243 RNU6-99P-201ENST00000364721 107 ntBASIC-1.18□□□□□ -2.6
H3F3AP84243 Y_RNA.351-201ENST00000365436 96 ntBASIC-1.18□□□□□ -2.6
H3F3AP84243 RNY3P4-201ENST00000384428 101 ntBASIC-1.18□□□□□ -2.6
H3F3AP84243 MIR599-201ENST00000385069 95 ntBASIC-1.18□□□□□ -2.6
H3F3AP84243 RNU6-780P-201ENST00000391030 104 ntBASIC-1.18□□□□□ -2.6
H3F3AP84243 Y_RNA.592-201ENST00000410274 109 ntBASIC-1.18□□□□□ -2.6
H3F3AP84243 IGKV1-22-201ENST00000524313 326 ntBASIC-1.18□□□□□ -2.6
H3F3AP84243 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-1.18□□□□□ -2.6
H3F3AP84243 MIR6851-201ENST00000617060 67 ntBASIC-1.18□□□□□ -2.6
H3F3AP84243 AC090617.10-201ENST00000624308 134 ntBASIC-1.18□□□□□ -2.6
H3F3AP84243 MTND5P18-201ENST00000445624 1801 ntBASIC-1.18□□□□□ -2.6
H3F3AP84243 RNY3P3-201ENST00000363816 102 ntBASIC-1.19□□□□□ -2.6
H3F3AP84243 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.19□□□□□ -2.6
H3F3AP84243 RNU4-36P-201ENST00000364294 144 ntBASIC-1.19□□□□□ -2.6
H3F3AP84243 Y_RNA.359-201ENST00000365498 102 ntBASIC-1.19□□□□□ -2.6
H3F3AP84243 SNORD24-201ENST00000383884 75 ntBASIC-1.19□□□□□ -2.6
H3F3AP84243 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.19□□□□□ -2.6
H3F3AP84243 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.19□□□□□ -2.6
H3F3AP84243 AL500527.2-201ENST00000454105 95 ntBASIC-1.19□□□□□ -2.6
H3F3AP84243 AC100767.1-201ENST00000528178 123 ntBASIC-1.19□□□□□ -2.6
H3F3AP84243 AC124864.2-201ENST00000624736 186 ntBASIC-1.19□□□□□ -2.6
H3F3AP84243 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-1.2□□□□□ -2.6
H3F3AP84243 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.2□□□□□ -2.6
H3F3AP84243 SNORD81.1-201ENST00000363064 77 ntBASIC-1.2□□□□□ -2.6
H3F3AP84243 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.2□□□□□ -2.6
H3F3AP84243 RNU6-1189P-201ENST00000383958 107 ntBASIC-1.2□□□□□ -2.6
H3F3AP84243 SNORA72.4-201ENST00000384174 132 ntBASIC-1.2□□□□□ -2.6
H3F3AP84243 RNU6-154P-201ENST00000384306 106 ntBASIC-1.2□□□□□ -2.6
H3F3AP84243 RNU6-900P-201ENST00000384498 102 ntBASIC-1.2□□□□□ -2.6
H3F3AP84243 RNU6-831P-201ENST00000384548 107 ntBASIC-1.2□□□□□ -2.6
H3F3AP84243 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.2□□□□□ -2.6
H3F3AP84243 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.2□□□□□ -2.6
H3F3AP84243 AC009161.1-201ENST00000417306 376 ntBASIC-1.2□□□□□ -2.6
H3F3AP84243 AL160004.2-201ENST00000432935 350 ntBASIC-1.2□□□□□ -2.6
H3F3AP84243 snoU13.13-201ENST00000458842 104 ntBASIC-1.2□□□□□ -2.6
H3F3AP84243 RNU6-138P-201ENST00000515952 107 ntBASIC-1.2□□□□□ -2.6
H3F3AP84243 RNU7-79P-201ENST00000516082 62 ntBASIC-1.2□□□□□ -2.6
H3F3AP84243 MIR3179-1-201ENST00000578940 84 ntBASIC-1.2□□□□□ -2.6
H3F3AP84243 MIR3179-2-201ENST00000579107 84 ntBASIC-1.2□□□□□ -2.6
H3F3AP84243 MIR3179-3-201ENST00000579566 84 ntBASIC-1.2□□□□□ -2.6
H3F3AP84243 MIR548H5-201ENST00000580314 60 ntBASIC-1.2□□□□□ -2.6
H3F3AP84243 MIR3179-4-201ENST00000617599 84 ntBASIC-1.2□□□□□ -2.6
H3F3AP84243 MTND5P26-201ENST00000426018 1752 ntBASIC-1.21□□□□□ -2.6
H3F3AP84243 SNORA22.1-201ENST00000362701 134 ntBASIC-1.21□□□□□ -2.6
H3F3AP84243 RNU6-801P-201ENST00000364087 105 ntBASIC-1.21□□□□□ -2.6
H3F3AP84243 RNY4P3-201ENST00000365254 95 ntBASIC-1.21□□□□□ -2.6
H3F3AP84243 Y_RNA.331-201ENST00000365267 102 ntBASIC-1.21□□□□□ -2.6
H3F3AP84243 SNORD115-44-201ENST00000365391 82 ntBASIC-1.21□□□□□ -2.6
H3F3AP84243 MIR517B-201ENST00000385102 67 ntBASIC-1.21□□□□□ -2.6
H3F3AP84243 AL603914.1-201ENST00000401964 204 ntBASIC-1.21□□□□□ -2.6
H3F3AP84243 RNU6-1156P-201ENST00000410365 100 ntBASIC-1.21□□□□□ -2.6
H3F3AP84243 TRAJ51-201ENST00000504127 63 ntBASIC-1.21□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms