Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 RNU6-831P-201ENST00000384548 107 ntBASIC-1.2□□□□□ -2.6
HIST1H3AP68431 SNORD56B-201ENST00000384713 71 ntBASIC-1.2□□□□□ -2.6
HIST1H3AP68431 Y_RNA.570-201ENST00000384750 101 ntBASIC-1.2□□□□□ -2.6
HIST1H3AP68431 AC009161.1-201ENST00000417306 376 ntBASIC-1.2□□□□□ -2.6
HIST1H3AP68431 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.2□□□□□ -2.6
HIST1H3AP68431 MTND5P26-201ENST00000426018 1752 ntBASIC-1.21□□□□□ -2.6
HIST1H3AP68431 RNA5SP403-201ENST00000363598 108 ntBASIC-1.21□□□□□ -2.6
HIST1H3AP68431 Y_RNA.331-201ENST00000365267 102 ntBASIC-1.21□□□□□ -2.6
HIST1H3AP68431 SNORA72.4-201ENST00000384174 132 ntBASIC-1.21□□□□□ -2.6
HIST1H3AP68431 RNU6-901P-201ENST00000384593 106 ntBASIC-1.21□□□□□ -2.6
HIST1H3AP68431 MIR548A2-201ENST00000384956 97 ntBASIC-1.21□□□□□ -2.6
HIST1H3AP68431 RNU6-1156P-201ENST00000410365 100 ntBASIC-1.21□□□□□ -2.6
HIST1H3AP68431 RNU4-63P-201ENST00000411313 118 ntBASIC-1.21□□□□□ -2.6
HIST1H3AP68431 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-1.21□□□□□ -2.6
HIST1H3AP68431 SNORA27.4-201ENST00000516650 95 ntBASIC-1.21□□□□□ -2.6
HIST1H3AP68431 Y_RNA.708-201ENST00000516950 96 ntBASIC-1.21□□□□□ -2.6
HIST1H3AP68431 RNU6-1314P-201ENST00000517139 104 ntBASIC-1.21□□□□□ -2.6
HIST1H3AP68431 MIR4280-201ENST00000582178 76 ntBASIC-1.21□□□□□ -2.6
HIST1H3AP68431 SNORD61-201ENST00000384252 73 ntBASIC-1.22□□□□□ -2.6
HIST1H3AP68431 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.22□□□□□ -2.6
HIST1H3AP68431 MTND5P5-201ENST00000503764 376 ntBASIC-1.22□□□□□ -2.6
HIST1H3AP68431 RNA5SP395-201ENST00000516567 118 ntBASIC-1.22□□□□□ -2.6
HIST1H3AP68431 RNU6-175P-201ENST00000516896 107 ntBASIC-1.22□□□□□ -2.6
HIST1H3AP68431 AC005899.2-201ENST00000584353 90 ntBASIC-1.22□□□□□ -2.6
HIST1H3AP68431 AC119751.7-201ENST00000600494 245 ntBASIC-1.22□□□□□ -2.6
HIST1H3AP68431 AC087588.2-201ENST00000617667 426 ntBASIC-1.22□□□□□ -2.6
HIST1H3AP68431 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-1.22□□□□□ -2.61
HIST1H3AP68431 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.23□□□□□ -2.61
HIST1H3AP68431 RNA5SP368-201ENST00000364298 116 ntBASIC-1.23□□□□□ -2.61
HIST1H3AP68431 RNY1P13-201ENST00000365030 105 ntBASIC-1.23□□□□□ -2.61
HIST1H3AP68431 SNORD24-201ENST00000383884 75 ntBASIC-1.23□□□□□ -2.61
HIST1H3AP68431 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.23□□□□□ -2.61
HIST1H3AP68431 Y_RNA.440-201ENST00000384120 114 ntBASIC-1.23□□□□□ -2.61
HIST1H3AP68431 MIR181B2-201ENST00000385004 89 ntBASIC-1.23□□□□□ -2.61
HIST1H3AP68431 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-1.23□□□□□ -2.61
HIST1H3AP68431 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.23□□□□□ -2.61
HIST1H3AP68431 MIR4662B-201ENST00000579498 81 ntBASIC-1.23□□□□□ -2.61
HIST1H3AP68431 SNORD81.1-201ENST00000363064 77 ntBASIC-1.24□□□□□ -2.61
HIST1H3AP68431 RNA5SP133-201ENST00000363368 119 ntBASIC-1.24□□□□□ -2.61
HIST1H3AP68431 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.24□□□□□ -2.61
HIST1H3AP68431 RNU6-1189P-201ENST00000383958 107 ntBASIC-1.24□□□□□ -2.61
HIST1H3AP68431 SNORA18-201ENST00000384416 132 ntBASIC-1.24□□□□□ -2.61
HIST1H3AP68431 Y_RNA.553-201ENST00000384670 102 ntBASIC-1.24□□□□□ -2.61
HIST1H3AP68431 RNU6-721P-201ENST00000410155 105 ntBASIC-1.24□□□□□ -2.61
HIST1H3AP68431 AL160004.2-201ENST00000432935 350 ntBASIC-1.24□□□□□ -2.61
HIST1H3AP68431 AL500527.2-201ENST00000454105 95 ntBASIC-1.24□□□□□ -2.61
HIST1H3AP68431 AC019235.1-201ENST00000503847 207 ntBASIC-1.24□□□□□ -2.61
HIST1H3AP68431 Y_RNA.682-201ENST00000516457 100 ntBASIC-1.24□□□□□ -2.61
HIST1H3AP68431 AC100767.1-201ENST00000528178 123 ntBASIC-1.24□□□□□ -2.61
HIST1H3AP68431 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.24□□□□□ -2.61
HIST1H3AP68431 Y_RNA.77-201ENST00000362962 107 ntBASIC-1.25□□□□□ -2.61
HIST1H3AP68431 RNU4-36P-201ENST00000364294 144 ntBASIC-1.25□□□□□ -2.61
HIST1H3AP68431 RNU6-593P-201ENST00000364716 112 ntBASIC-1.25□□□□□ -2.61
HIST1H3AP68431 RNU6-1042P-201ENST00000384204 107 ntBASIC-1.25□□□□□ -2.61
HIST1H3AP68431 MTND2P9-201ENST00000422293 931 ntBASIC-1.25□□□□□ -2.61
HIST1H3AP68431 AF228730.3-201ENST00000436691 102 ntBASIC-1.25□□□□□ -2.61
HIST1H3AP68431 RNU6-307P-201ENST00000516743 106 ntBASIC-1.25□□□□□ -2.61
HIST1H3AP68431 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.25□□□□□ -2.61
HIST1H3AP68431 AL021707.8-201ENST00000609428 183 ntBASIC-1.25□□□□□ -2.61
HIST1H3AP68431 AC024614.3-201ENST00000637860 256 ntBASIC-1.25□□□□□ -2.61
HIST1H3AP68431 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.26□□□□□ -2.61
HIST1H3AP68431 SNORA20-201ENST00000384662 132 ntBASIC-1.26□□□□□ -2.61
HIST1H3AP68431 RNU6-308P-201ENST00000390957 107 ntBASIC-1.26□□□□□ -2.61
HIST1H3AP68431 RNU6-383P-201ENST00000410864 94 ntBASIC-1.26□□□□□ -2.61
HIST1H3AP68431 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.26□□□□□ -2.61
HIST1H3AP68431 RNU6-373P-201ENST00000411247 98 ntBASIC-1.26□□□□□ -2.61
HIST1H3AP68431 SNORD77.4-201ENST00000516158 81 ntBASIC-1.26□□□□□ -2.61
HIST1H3AP68431 uc_338.10-201ENST00000621872 182 ntBASIC-1.26□□□□□ -2.61
HIST1H3AP68431 Y_RNA.14-201ENST00000362415 103 ntBASIC-1.27□□□□□ -2.61
HIST1H3AP68431 RNU6-888P-201ENST00000363010 101 ntBASIC-1.27□□□□□ -2.61
HIST1H3AP68431 RNU6-801P-201ENST00000364087 105 ntBASIC-1.27□□□□□ -2.61
HIST1H3AP68431 SNORD114-15-201ENST00000364687 72 ntBASIC-1.27□□□□□ -2.61
HIST1H3AP68431 Y_RNA.301-201ENST00000364990 103 ntBASIC-1.27□□□□□ -2.61
HIST1H3AP68431 Y_RNA.351-201ENST00000365436 96 ntBASIC-1.27□□□□□ -2.61
HIST1H3AP68431 Y_RNA.404-201ENST00000383978 102 ntBASIC-1.27□□□□□ -2.61
HIST1H3AP68431 MTND3P10-201ENST00000450967 341 ntBASIC-1.27□□□□□ -2.61
HIST1H3AP68431 RNU7-169P-201ENST00000459456 61 ntBASIC-1.27□□□□□ -2.61
HIST1H3AP68431 RNU6-365P-201ENST00000517113 106 ntBASIC-1.27□□□□□ -2.61
HIST1H3AP68431 AP000676.1-201ENST00000533307 52 ntBASIC-1.27□□□□□ -2.61
HIST1H3AP68431 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.27□□□□□ -2.61
HIST1H3AP68431 uc_338.19-201ENST00000616808 99 ntBASIC-1.27□□□□□ -2.61
HIST1H3AP68431 MIR6851-201ENST00000617060 67 ntBASIC-1.27□□□□□ -2.61
HIST1H3AP68431 U6.109-201ENST00000636749 87 ntBASIC-1.27□□□□□ -2.61
HIST1H3AP68431 MTND5P18-201ENST00000445624 1801 ntBASIC-1.28□□□□□ -2.61
HIST1H3AP68431 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.28□□□□□ -2.61
HIST1H3AP68431 MIR539-201ENST00000365690 78 ntBASIC-1.28□□□□□ -2.61
HIST1H3AP68431 Y_RNA.410-201ENST00000383992 113 ntBASIC-1.28□□□□□ -2.61
HIST1H3AP68431 RNU6-259P-201ENST00000383999 107 ntBASIC-1.28□□□□□ -2.61
HIST1H3AP68431 Y_RNA.631-201ENST00000459607 101 ntBASIC-1.28□□□□□ -2.61
HIST1H3AP68431 AC006362.1-201ENST00000567392 174 ntBASIC-1.28□□□□□ -2.61
HIST1H3AP68431 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.28□□□□□ -2.61
HIST1H3AP68431 PISRT1.1-201ENST00000616930 107 ntBASIC-1.28□□□□□ -2.61
HIST1H3AP68431 RNU6-1205P-201ENST00000363625 106 ntBASIC-1.29□□□□□ -2.62
HIST1H3AP68431 Y_RNA.577-201ENST00000384794 101 ntBASIC-1.29□□□□□ -2.62
HIST1H3AP68431 DEFB108C-201ENST00000400154 252 ntBASIC-1.29□□□□□ -2.62
HIST1H3AP68431 RNU6-1148P-201ENST00000410992 104 ntBASIC-1.29□□□□□ -2.62
HIST1H3AP68431 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-1.29□□□□□ -2.62
HIST1H3AP68431 IGKV1-22-201ENST00000524313 326 ntBASIC-1.29□□□□□ -2.62
HIST1H3AP68431 MIR548AX-201ENST00000580117 73 ntBASIC-1.29□□□□□ -2.62
HIST1H3AP68431 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.29□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms