Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 Y_RNA.445-201ENST00000384168 102 ntBASIC0.07□□□□□ -2.4
VSX2P58304 MIR215-201ENST00000384858 110 ntBASIC0.07□□□□□ -2.4
VSX2P58304 AC073261.1-201ENST00000429409 121 ntBASIC0.07□□□□□ -2.4
VSX2P58304 RNU7-53P-201ENST00000516705 60 ntBASIC0.07□□□□□ -2.4
VSX2P58304 AC124312.5-201ENST00000604451 268 ntBASIC0.07□□□□□ -2.4
VSX2P58304 AL008718.3-201ENST00000610217 321 ntBASIC0.07□□□□□ -2.4
VSX2P58304 MIR342-201ENST00000362212 99 ntBASIC0.06□□□□□ -2.4
VSX2P58304 MIR367-201ENST00000362299 68 ntBASIC0.06□□□□□ -2.4
VSX2P58304 RNU4-90P-201ENST00000362773 141 ntBASIC0.06□□□□□ -2.4
VSX2P58304 RNU6-888P-201ENST00000363010 101 ntBASIC0.06□□□□□ -2.4
VSX2P58304 snoU2_19.2-201ENST00000363024 80 ntBASIC0.06□□□□□ -2.4
VSX2P58304 Y_RNA.263-201ENST00000364659 114 ntBASIC0.06□□□□□ -2.4
VSX2P58304 SNORA26.6-201ENST00000391256 115 ntBASIC0.06□□□□□ -2.4
VSX2P58304 MTND4P19-201ENST00000446659 478 ntBASIC0.06□□□□□ -2.4
VSX2P58304 RNU6-475P-201ENST00000516073 104 ntBASIC0.06□□□□□ -2.4
VSX2P58304 Y_RNA.681-201ENST00000516445 113 ntBASIC0.06□□□□□ -2.4
VSX2P58304 AC131281.1-201ENST00000522984 164 ntBASIC0.06□□□□□ -2.4
VSX2P58304 Y_RNA.24-201ENST00000362508 103 ntBASIC0.05□□□□□ -2.4
VSX2P58304 Y_RNA.66-201ENST00000362862 102 ntBASIC0.05□□□□□ -2.4
VSX2P58304 SNORD24-201ENST00000383884 75 ntBASIC0.05□□□□□ -2.4
VSX2P58304 Y_RNA.541-201ENST00000384640 113 ntBASIC0.05□□□□□ -2.4
VSX2P58304 RNU6-823P-201ENST00000391042 103 ntBASIC0.05□□□□□ -2.4
VSX2P58304 SNORD77.3-201ENST00000391113 65 ntBASIC0.05□□□□□ -2.4
VSX2P58304 SNORD93-201ENST00000408813 74 ntBASIC0.05□□□□□ -2.4
VSX2P58304 AC069271.1-201ENST00000445577 156 ntBASIC0.05□□□□□ -2.4
VSX2P58304 RNU6-998P-201ENST00000515894 101 ntBASIC0.05□□□□□ -2.4
VSX2P58304 RNU6-365P-201ENST00000517113 106 ntBASIC0.05□□□□□ -2.4
VSX2P58304 MIR5190-201ENST00000581537 80 ntBASIC0.05□□□□□ -2.4
VSX2P58304 MIR4795-201ENST00000584182 89 ntBASIC0.05□□□□□ -2.4
VSX2P58304 MIR376A2-201ENST00000636782 80 ntBASIC0.05□□□□□ -2.4
VSX2P58304 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.05□□□□□ -2.4
VSX2P58304 MIR369-201ENST00000362155 70 ntBASIC0.04□□□□□ -2.4
VSX2P58304 Y_RNA.42-201ENST00000362660 108 ntBASIC0.04□□□□□ -2.4
VSX2P58304 Y_RNA.91-201ENST00000363042 107 ntBASIC0.04□□□□□ -2.4
VSX2P58304 Y_RNA.440-201ENST00000384120 114 ntBASIC0.04□□□□□ -2.4
VSX2P58304 Y_RNA.581-201ENST00000391017 97 ntBASIC0.04□□□□□ -2.4
VSX2P58304 MIR548I3-201ENST00000408378 149 ntBASIC0.04□□□□□ -2.4
VSX2P58304 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.04□□□□□ -2.4
VSX2P58304 MIR4662B-201ENST00000579498 81 ntBASIC0.04□□□□□ -2.4
VSX2P58304 MIR6717-201ENST00000622747 73 ntBASIC0.04□□□□□ -2.4
VSX2P58304 AC067863.3-201ENST00000624172 122 ntBASIC0.04□□□□□ -2.4
VSX2P58304 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.04□□□□□ -2.4
VSX2P58304 Y_RNA.26-201ENST00000362539 101 ntBASIC0.03□□□□□ -2.4
VSX2P58304 Y_RNA.217-201ENST00000364214 105 ntBASIC0.03□□□□□ -2.4
VSX2P58304 Y_RNA.280-201ENST00000364765 112 ntBASIC0.03□□□□□ -2.4
VSX2P58304 RNU6-806P-201ENST00000365147 105 ntBASIC0.03□□□□□ -2.4
VSX2P58304 MT-TF-201ENST00000387314 71 ntBASIC0.03□□□□□ -2.4
VSX2P58304 RNU4-83P-201ENST00000410863 133 ntBASIC0.03□□□□□ -2.4
VSX2P58304 Y_RNA.641-201ENST00000459414 105 ntBASIC0.03□□□□□ -2.4
VSX2P58304 Y_RNA.631-201ENST00000459607 101 ntBASIC0.03□□□□□ -2.4
VSX2P58304 MIR4768-201ENST00000585270 74 ntBASIC0.03□□□□□ -2.4
VSX2P58304 MIR6755-201ENST00000619993 66 ntBASIC0.03□□□□□ -2.4
VSX2P58304 uc_338.16-201ENST00000621804 95 ntBASIC0.03□□□□□ -2.4
VSX2P58304 AC090574.1-201ENST00000623186 233 ntBASIC0.03□□□□□ -2.4
VSX2P58304 MIR4315-1-201ENST00000636800 73 ntBASIC0.03□□□□□ -2.4
VSX2P58304 MIR4315-2-201ENST00000640925 73 ntBASIC0.03□□□□□ -2.4
VSX2P58304 Y_RNA.13-201ENST00000362403 112 ntBASIC0.02□□□□□ -2.41
VSX2P58304 RNU4-73P-201ENST00000363164 141 ntBASIC0.02□□□□□ -2.41
VSX2P58304 RNA5SP214-201ENST00000363378 118 ntBASIC0.02□□□□□ -2.41
VSX2P58304 Y_RNA.229-201ENST00000364347 113 ntBASIC0.02□□□□□ -2.41
VSX2P58304 SNORD114-9-201ENST00000364370 72 ntBASIC0.02□□□□□ -2.41
VSX2P58304 Y_RNA.395-201ENST00000383945 109 ntBASIC0.02□□□□□ -2.41
VSX2P58304 Y_RNA.419-201ENST00000384041 102 ntBASIC0.02□□□□□ -2.41
VSX2P58304 SNORA1-201ENST00000384107 130 ntBASIC0.02□□□□□ -2.41
VSX2P58304 MT-TT-201ENST00000387460 66 ntBASIC0.02□□□□□ -2.41
VSX2P58304 MIR526A2-201ENST00000390198 65 ntBASIC0.02□□□□□ -2.41
VSX2P58304 U8.15-201ENST00000390947 134 ntBASIC0.02□□□□□ -2.41
VSX2P58304 RNU6-1009P-201ENST00000390996 107 ntBASIC0.02□□□□□ -2.41
VSX2P58304 RNU2-59P-201ENST00000410482 191 ntBASIC0.02□□□□□ -2.41
VSX2P58304 ELOCP20-201ENST00000422460 345 ntBASIC0.02□□□□□ -2.41
VSX2P58304 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.02□□□□□ -2.41
VSX2P58304 SNRPGP8-201ENST00000454064 226 ntBASIC0.02□□□□□ -2.41
VSX2P58304 RNU7-96P-201ENST00000459535 64 ntBASIC0.02□□□□□ -2.41
VSX2P58304 RNU6-504P-201ENST00000516568 104 ntBASIC0.02□□□□□ -2.41
VSX2P58304 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.02□□□□□ -2.41
VSX2P58304 AC112693.2-201ENST00000556538 232 ntBASIC0.02□□□□□ -2.41
VSX2P58304 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.02□□□□□ -2.41
VSX2P58304 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.02□□□□□ -2.41
VSX2P58304 Y_RNA.16-201ENST00000362421 102 ntBASIC0.01□□□□□ -2.41
VSX2P58304 Y_RNA.214-201ENST00000364201 112 ntBASIC0.01□□□□□ -2.41
VSX2P58304 Y_RNA.412-201ENST00000384001 104 ntBASIC0.01□□□□□ -2.41
VSX2P58304 AC096949.1-201ENST00000412047 152 ntBASIC0.01□□□□□ -2.41
VSX2P58304 RPL21P38-201ENST00000418090 167 ntBASIC0.01□□□□□ -2.41
VSX2P58304 SNORA27.4-201ENST00000516650 95 ntBASIC0.01□□□□□ -2.41
VSX2P58304 RNA5SP268-201ENST00000516828 124 ntBASIC0.01□□□□□ -2.41
VSX2P58304 AL133255.1-201ENST00000606374 441 ntBASIC0.01□□□□□ -2.41
VSX2P58304 Y_RNA.634-201ENST00000364811 113 ntBASIC0□□□□□ -2.41
VSX2P58304 RNU6-290P-201ENST00000365212 101 ntBASIC0□□□□□ -2.41
VSX2P58304 RNU6-1189P-201ENST00000383958 107 ntBASIC0□□□□□ -2.41
VSX2P58304 RNU6-187P-201ENST00000384139 106 ntBASIC0□□□□□ -2.41
VSX2P58304 RNU6-1228P-201ENST00000391014 107 ntBASIC0□□□□□ -2.41
VSX2P58304 SNORA31.14-201ENST00000516728 116 ntBASIC0□□□□□ -2.41
VSX2P58304 MIR7107-201ENST00000611489 80 ntBASIC0□□□□□ -2.41
VSX2P58304 Y_RNA.802-201ENST00000614892 130 ntBASIC0□□□□□ -2.41
VSX2P58304 AC090971.5-201ENST00000621102 293 ntBASIC0□□□□□ -2.41
VSX2P58304 MIR371B-201ENST00000638082 66 ntBASIC0□□□□□ -2.41
VSX2P58304 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.01□□□□□ -2.41
VSX2P58304 RNU6-403P-201ENST00000363163 104 ntBASIC-0.01□□□□□ -2.41
VSX2P58304 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.01□□□□□ -2.41
VSX2P58304 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 179.5 ms