Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 Y_RNA.210-201ENST00000364161 110 ntBASIC0.2□□□□□ -2.38
PKNOX1P55347 Y_RNA.634-201ENST00000364811 113 ntBASIC0.2□□□□□ -2.38
PKNOX1P55347 SNORA22B-201ENST00000383876 138 ntBASIC0.2□□□□□ -2.38
PKNOX1P55347 Y_RNA.455-201ENST00000384230 98 ntBASIC0.2□□□□□ -2.38
PKNOX1P55347 SNORA8.3-201ENST00000384679 139 ntBASIC0.2□□□□□ -2.38
PKNOX1P55347 MIR626-201ENST00000385032 94 ntBASIC0.2□□□□□ -2.38
PKNOX1P55347 MIR518E-201ENST00000385252 88 ntBASIC0.2□□□□□ -2.38
PKNOX1P55347 SNORA26.6-201ENST00000391256 115 ntBASIC0.2□□□□□ -2.38
PKNOX1P55347 MIR936-201ENST00000401264 98 ntBASIC0.2□□□□□ -2.38
PKNOX1P55347 MTND5P22-201ENST00000458380 195 ntBASIC0.2□□□□□ -2.38
PKNOX1P55347 RNU6-988P-201ENST00000519081 107 ntBASIC0.2□□□□□ -2.38
PKNOX1P55347 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.2□□□□□ -2.38
PKNOX1P55347 AC113195.1-201ENST00000579952 141 ntBASIC0.2□□□□□ -2.38
PKNOX1P55347 MIR4431-201ENST00000579990 94 ntBASIC0.2□□□□□ -2.38
PKNOX1P55347 SNORA25.18-201ENST00000607153 114 ntBASIC0.2□□□□□ -2.38
PKNOX1P55347 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.2□□□□□ -2.38
PKNOX1P55347 MIR6515-201ENST00000619843 57 ntBASIC0.2□□□□□ -2.38
PKNOX1P55347 AL160413.1-201ENST00000622780 310 ntBASIC0.2□□□□□ -2.38
PKNOX1P55347 Y_RNA.84-201ENST00000363011 104 ntBASIC0.19□□□□□ -2.38
PKNOX1P55347 SNORD118-201ENST00000363593 134 ntBASIC0.19□□□□□ -2.38
PKNOX1P55347 SNORA8.2-201ENST00000384372 139 ntBASIC0.19□□□□□ -2.38
PKNOX1P55347 Y_RNA.527-201ENST00000384573 102 ntBASIC0.19□□□□□ -2.38
PKNOX1P55347 RNA5SP193-201ENST00000410353 107 ntBASIC0.19□□□□□ -2.38
PKNOX1P55347 SNORD71-201ENST00000411292 86 ntBASIC0.19□□□□□ -2.38
PKNOX1P55347 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.19□□□□□ -2.38
PKNOX1P55347 MTATP6P23-201ENST00000440153 476 ntBASIC0.19□□□□□ -2.38
PKNOX1P55347 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.19□□□□□ -2.38
PKNOX1P55347 SERF1AP1-201ENST00000514575 187 ntBASIC0.19□□□□□ -2.38
PKNOX1P55347 RNU6-448P-201ENST00000517052 107 ntBASIC0.19□□□□□ -2.38
PKNOX1P55347 AC022523.2-201ENST00000561045 150 ntBASIC0.19□□□□□ -2.38
PKNOX1P55347 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.19□□□□□ -2.38
PKNOX1P55347 MIR3678-201ENST00000578455 94 ntBASIC0.19□□□□□ -2.38
PKNOX1P55347 AC097639.2-201ENST00000603159 172 ntBASIC0.19□□□□□ -2.38
PKNOX1P55347 MIR376A2-201ENST00000636782 80 ntBASIC0.19□□□□□ -2.38
PKNOX1P55347 RNU6-740P-201ENST00000364734 105 ntBASIC0.18□□□□□ -2.38
PKNOX1P55347 RNU6-1189P-201ENST00000383958 107 ntBASIC0.18□□□□□ -2.38
PKNOX1P55347 Y_RNA.410-201ENST00000383992 113 ntBASIC0.18□□□□□ -2.38
PKNOX1P55347 RNU2-55P-201ENST00000411146 174 ntBASIC0.18□□□□□ -2.38
PKNOX1P55347 RNU7-45P-201ENST00000459460 63 ntBASIC0.18□□□□□ -2.38
PKNOX1P55347 RNU6-1299P-201ENST00000516316 100 ntBASIC0.18□□□□□ -2.38
PKNOX1P55347 Y_RNA.711-201ENST00000516993 102 ntBASIC0.18□□□□□ -2.38
PKNOX1P55347 AP001282.2-201ENST00000616149 309 ntBASIC0.18□□□□□ -2.38
PKNOX1P55347 MIR8066-201ENST00000617280 78 ntBASIC0.18□□□□□ -2.38
PKNOX1P55347 AC078938.1-201ENST00000620993 318 ntBASIC0.18□□□□□ -2.38
PKNOX1P55347 MIR6717-201ENST00000622747 73 ntBASIC0.18□□□□□ -2.38
PKNOX1P55347 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.18□□□□□ -2.38
PKNOX1P55347 Y_RNA.117-201ENST00000363294 101 ntBASIC0.17□□□□□ -2.38
PKNOX1P55347 Y_RNA.138-201ENST00000363462 102 ntBASIC0.17□□□□□ -2.38
PKNOX1P55347 Y_RNA.152-201ENST00000363578 100 ntBASIC0.17□□□□□ -2.38
PKNOX1P55347 Y_RNA.158-201ENST00000363651 101 ntBASIC0.17□□□□□ -2.38
PKNOX1P55347 Y_RNA.275-201ENST00000364726 110 ntBASIC0.17□□□□□ -2.38
PKNOX1P55347 RNU6-1289P-201ENST00000384431 106 ntBASIC0.17□□□□□ -2.38
PKNOX1P55347 MT-TT-201ENST00000387460 66 ntBASIC0.17□□□□□ -2.38
PKNOX1P55347 RNU2-70P-201ENST00000410718 179 ntBASIC0.17□□□□□ -2.38
PKNOX1P55347 snoU13.18-201ENST00000459483 104 ntBASIC0.17□□□□□ -2.38
PKNOX1P55347 RNA5SP153-201ENST00000516498 76 ntBASIC0.17□□□□□ -2.38
PKNOX1P55347 AC133485.4-201ENST00000561835 220 ntBASIC0.17□□□□□ -2.38
PKNOX1P55347 SNORA4-201ENST00000584302 138 ntBASIC0.17□□□□□ -2.38
PKNOX1P55347 AL589743.1-201ENST00000551932 2712 ntBASIC0.17□□□□□ -2.38
PKNOX1P55347 MIR342-201ENST00000362212 99 ntBASIC0.16□□□□□ -2.38
PKNOX1P55347 RNU6-349P-201ENST00000362402 107 ntBASIC0.16□□□□□ -2.38
PKNOX1P55347 Y_RNA.42-201ENST00000362660 108 ntBASIC0.16□□□□□ -2.38
PKNOX1P55347 Y_RNA.128-201ENST00000363391 112 ntBASIC0.16□□□□□ -2.38
PKNOX1P55347 SNORA36.1-201ENST00000363424 132 ntBASIC0.16□□□□□ -2.38
PKNOX1P55347 RNA5SP62-201ENST00000363457 110 ntBASIC0.16□□□□□ -2.38
PKNOX1P55347 SNORD114-23-201ENST00000363536 72 ntBASIC0.16□□□□□ -2.38
PKNOX1P55347 Y_RNA.304-201ENST00000365011 112 ntBASIC0.16□□□□□ -2.38
PKNOX1P55347 RNA5SP117-201ENST00000365294 118 ntBASIC0.16□□□□□ -2.38
PKNOX1P55347 RNU6-597P-201ENST00000365620 102 ntBASIC0.16□□□□□ -2.38
PKNOX1P55347 SNORA1-201ENST00000384107 130 ntBASIC0.16□□□□□ -2.38
PKNOX1P55347 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.16□□□□□ -2.38
PKNOX1P55347 SNORA26-201ENST00000391286 122 ntBASIC0.16□□□□□ -2.38
PKNOX1P55347 SNRPGP8-201ENST00000454064 226 ntBASIC0.16□□□□□ -2.38
PKNOX1P55347 RNU6-1338P-201ENST00000516328 91 ntBASIC0.16□□□□□ -2.38
PKNOX1P55347 SCARNA24.2-201ENST00000516968 130 ntBASIC0.16□□□□□ -2.38
PKNOX1P55347 MIR4680-201ENST00000580906 66 ntBASIC0.16□□□□□ -2.38
PKNOX1P55347 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.16□□□□□ -2.38
PKNOX1P55347 uc_338.16-201ENST00000621804 95 ntBASIC0.16□□□□□ -2.38
PKNOX1P55347 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.16□□□□□ -2.38
PKNOX1P55347 AC134503.1-201ENST00000633048 54 ntBASIC0.16□□□□□ -2.38
PKNOX1P55347 Y_RNA.23-201ENST00000362496 106 ntBASIC0.15□□□□□ -2.39
PKNOX1P55347 Y_RNA.153-201ENST00000363615 91 ntBASIC0.15□□□□□ -2.39
PKNOX1P55347 Y_RNA.216-201ENST00000364205 93 ntBASIC0.15□□□□□ -2.39
PKNOX1P55347 snoU2_19.4-201ENST00000364329 80 ntBASIC0.15□□□□□ -2.39
PKNOX1P55347 Y_RNA.432-201ENST00000384087 111 ntBASIC0.15□□□□□ -2.39
PKNOX1P55347 Y_RNA.567-201ENST00000384736 106 ntBASIC0.15□□□□□ -2.39
PKNOX1P55347 Y_RNA.617-201ENST00000410920 90 ntBASIC0.15□□□□□ -2.39
PKNOX1P55347 Y_RNA.622-201ENST00000411091 108 ntBASIC0.15□□□□□ -2.39
PKNOX1P55347 RNU6-1143P-201ENST00000516125 104 ntBASIC0.15□□□□□ -2.39
PKNOX1P55347 RNY3P5-201ENST00000384127 102 ntBASIC0.14□□□□□ -2.39
PKNOX1P55347 MIR598-201ENST00000384868 97 ntBASIC0.14□□□□□ -2.39
PKNOX1P55347 SNORD93-201ENST00000408813 74 ntBASIC0.14□□□□□ -2.39
PKNOX1P55347 RNU6-1203P-201ENST00000410703 110 ntBASIC0.14□□□□□ -2.39
PKNOX1P55347 RNU4-83P-201ENST00000410863 133 ntBASIC0.14□□□□□ -2.39
PKNOX1P55347 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.14□□□□□ -2.39
PKNOX1P55347 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.14□□□□□ -2.39
PKNOX1P55347 RNU6-863P-201ENST00000515989 104 ntBASIC0.14□□□□□ -2.39
PKNOX1P55347 RNU6-453P-201ENST00000516819 85 ntBASIC0.14□□□□□ -2.39
PKNOX1P55347 AC022709.1-201ENST00000615967 87 ntBASIC0.14□□□□□ -2.39
PKNOX1P55347 AL662814.1-201ENST00000617364 121 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms