Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC090425.1-201ENST00000610007 140 ntBASIC1.04□□□□□ -2.24
CDH11P55287 MIR8055-201ENST00000610739 97 ntBASIC1.04□□□□□ -2.24
CDH11P55287 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
CDH11P55287 MIR103A2-201ENST00000362154 78 ntBASIC1.03□□□□□ -2.24
CDH11P55287 RNU4-84P-201ENST00000364200 139 ntBASIC1.03□□□□□ -2.24
CDH11P55287 SNORA80D-201ENST00000384488 135 ntBASIC1.03□□□□□ -2.24
CDH11P55287 RNU6-768P-201ENST00000384683 107 ntBASIC1.03□□□□□ -2.24
CDH11P55287 RNU6-913P-201ENST00000390913 95 ntBASIC1.03□□□□□ -2.24
CDH11P55287 AC108059.2-201ENST00000434626 151 ntBASIC1.03□□□□□ -2.24
CDH11P55287 snoU13.16-201ENST00000459350 104 ntBASIC1.03□□□□□ -2.24
CDH11P55287 AC107297.1-201ENST00000459991 176 ntBASIC1.03□□□□□ -2.24
CDH11P55287 RNU6-998P-201ENST00000515894 101 ntBASIC1.03□□□□□ -2.24
CDH11P55287 SCARNA15-202ENST00000516881 127 ntBASIC1.03□□□□□ -2.24
CDH11P55287 RNA5SP404-201ENST00000517118 132 ntBASIC1.03□□□□□ -2.24
CDH11P55287 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.03□□□□□ -2.24
CDH11P55287 AC019288.1-201ENST00000557918 224 ntBASIC1.03□□□□□ -2.24
CDH11P55287 SEPT14P17-201ENST00000617978 177 ntBASIC1.03□□□□□ -2.24
CDH11P55287 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.03□□□□□ -2.25
CDH11P55287 RNU1-124P-201ENST00000363861 145 ntBASIC1.02□□□□□ -2.25
CDH11P55287 Y_RNA.191-201ENST00000363972 113 ntBASIC1.02□□□□□ -2.25
CDH11P55287 MRPL35P3-201ENST00000421557 364 ntBASIC1.02□□□□□ -2.25
CDH11P55287 MTND5P15-201ENST00000434246 349 ntBASIC1.02□□□□□ -2.25
CDH11P55287 AC002429.1-201ENST00000437672 148 ntBASIC1.02□□□□□ -2.25
CDH11P55287 RPS29P28-201ENST00000446439 141 ntBASIC1.02□□□□□ -2.25
CDH11P55287 RNU7-96P-201ENST00000459535 64 ntBASIC1.02□□□□□ -2.25
CDH11P55287 AC074198.2-201ENST00000508153 258 ntBASIC1.02□□□□□ -2.25
CDH11P55287 RNU6-958P-201ENST00000516995 106 ntBASIC1.02□□□□□ -2.25
CDH11P55287 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.02□□□□□ -2.25
CDH11P55287 MIR6504-201ENST00000613520 61 ntBASIC1.02□□□□□ -2.25
CDH11P55287 MIR6516-201ENST00000630554 81 ntBASIC1.02□□□□□ -2.25
CDH11P55287 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
CDH11P55287 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
CDH11P55287 RNU6-1336P-201ENST00000383886 109 ntBASIC1.01□□□□□ -2.25
CDH11P55287 Y_RNA.393-201ENST00000383936 102 ntBASIC1.01□□□□□ -2.25
CDH11P55287 RNU6-239P-201ENST00000390990 99 ntBASIC1.01□□□□□ -2.25
CDH11P55287 PCNPP3-201ENST00000393579 471 ntBASIC1.01□□□□□ -2.25
CDH11P55287 RNA5SP127-201ENST00000411051 133 ntBASIC1.01□□□□□ -2.25
CDH11P55287 AC090844.1-201ENST00000422019 156 ntBASIC1.01□□□□□ -2.25
CDH11P55287 AL035398.1-201ENST00000430869 322 ntBASIC1.01□□□□□ -2.25
CDH11P55287 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.01□□□□□ -2.25
CDH11P55287 RNU7-67P-201ENST00000459003 62 ntBASIC1.01□□□□□ -2.25
CDH11P55287 AC107027.2-201ENST00000512197 115 ntBASIC1.01□□□□□ -2.25
CDH11P55287 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.01□□□□□ -2.25
CDH11P55287 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.01□□□□□ -2.25
CDH11P55287 FTX_2.1-201ENST00000618816 94 ntBASIC1.01□□□□□ -2.25
CDH11P55287 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1□□□□□ -2.25
CDH11P55287 RNU6-1082P-201ENST00000364574 107 ntBASIC1□□□□□ -2.25
CDH11P55287 SNORA22-201ENST00000383907 134 ntBASIC1□□□□□ -2.25
CDH11P55287 SNORA70.7-201ENST00000384159 133 ntBASIC1□□□□□ -2.25
CDH11P55287 SNORA22C-201ENST00000384614 134 ntBASIC1□□□□□ -2.25
CDH11P55287 RNU6-613P-201ENST00000410412 108 ntBASIC1□□□□□ -2.25
CDH11P55287 RNU6-1135P-201ENST00000411083 103 ntBASIC1□□□□□ -2.25
CDH11P55287 RNU2-11P-201ENST00000459191 187 ntBASIC1□□□□□ -2.25
CDH11P55287 Y_RNA.662-201ENST00000516028 97 ntBASIC1□□□□□ -2.25
CDH11P55287 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1□□□□□ -2.25
CDH11P55287 MIR4295-201ENST00000585286 85 ntBASIC1□□□□□ -2.25
CDH11P55287 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.99□□□□□ -2.25
CDH11P55287 RNU6-654P-201ENST00000364373 107 ntBASIC0.99□□□□□ -2.25
CDH11P55287 SNORA25.7-201ENST00000364375 127 ntBASIC0.99□□□□□ -2.25
CDH11P55287 Y_RNA.337-201ENST00000365312 102 ntBASIC0.99□□□□□ -2.25
CDH11P55287 RNU6-125P-201ENST00000384505 107 ntBASIC0.99□□□□□ -2.25
CDH11P55287 SNORA26.6-201ENST00000391256 115 ntBASIC0.99□□□□□ -2.25
CDH11P55287 AC063976.4-201ENST00000421971 163 ntBASIC0.99□□□□□ -2.25
CDH11P55287 RNU7-53P-201ENST00000516705 60 ntBASIC0.99□□□□□ -2.25
CDH11P55287 RNU6-182P-201ENST00000516970 105 ntBASIC0.99□□□□□ -2.25
CDH11P55287 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.99□□□□□ -2.25
CDH11P55287 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.99□□□□□ -2.25
CDH11P55287 AL020996.3-201ENST00000606617 222 ntBASIC0.99□□□□□ -2.25
CDH11P55287 Z97988.1-201ENST00000637697 135 ntBASIC0.99□□□□□ -2.25
CDH11P55287 AC008163.1-202ENST00000636004 2889 ntBASIC0.98□□□□□ -2.25
CDH11P55287 SNORD114-27-201ENST00000363766 70 ntBASIC0.98□□□□□ -2.25
CDH11P55287 RNU6-580P-201ENST00000365159 107 ntBASIC0.98□□□□□ -2.25
CDH11P55287 AC244023.1-201ENST00000426884 112 ntBASIC0.98□□□□□ -2.25
CDH11P55287 RNU7-90P-201ENST00000459216 62 ntBASIC0.98□□□□□ -2.25
CDH11P55287 AC087343.1-201ENST00000477341 475 ntBASIC0.98□□□□□ -2.25
CDH11P55287 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.98□□□□□ -2.25
CDH11P55287 AC036111.3-201ENST00000526389 112 ntBASIC0.98□□□□□ -2.25
CDH11P55287 AC242498.1-201ENST00000604134 111 ntBASIC0.98□□□□□ -2.25
CDH11P55287 Y_RNA.116-201ENST00000363292 103 ntBASIC0.97□□□□□ -2.25
CDH11P55287 RNU6-396P-201ENST00000365369 105 ntBASIC0.97□□□□□ -2.25
CDH11P55287 Y_RNA.351-201ENST00000365436 96 ntBASIC0.97□□□□□ -2.25
CDH11P55287 Y_RNA.357-201ENST00000365487 109 ntBASIC0.97□□□□□ -2.25
CDH11P55287 Y_RNA.521-201ENST00000384560 114 ntBASIC0.97□□□□□ -2.25
CDH11P55287 MT-TN-201ENST00000387400 73 ntBASIC0.97□□□□□ -2.25
CDH11P55287 MIR548I3-201ENST00000408378 149 ntBASIC0.97□□□□□ -2.25
CDH11P55287 RNU6-394P-201ENST00000410735 107 ntBASIC0.97□□□□□ -2.25
CDH11P55287 RNU6-1190P-201ENST00000410811 104 ntBASIC0.97□□□□□ -2.25
CDH11P55287 RNA5SP236-201ENST00000516169 116 ntBASIC0.97□□□□□ -2.25
CDH11P55287 MIR3646-201ENST00000578301 84 ntBASIC0.97□□□□□ -2.25
CDH11P55287 MIR4452-201ENST00000583004 71 ntBASIC0.97□□□□□ -2.25
CDH11P55287 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.97□□□□□ -2.25
CDH11P55287 AC091932.4-201ENST00000623386 200 ntBASIC0.97□□□□□ -2.25
CDH11P55287 MIR3658-201ENST00000636291 56 ntBASIC0.97□□□□□ -2.25
CDH11P55287 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
CDH11P55287 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.96□□□□□ -2.26
CDH11P55287 RNY1P11-201ENST00000363759 113 ntBASIC0.96□□□□□ -2.26
CDH11P55287 Y_RNA.272-201ENST00000364696 102 ntBASIC0.96□□□□□ -2.26
CDH11P55287 RNU6-886P-201ENST00000384319 105 ntBASIC0.96□□□□□ -2.26
CDH11P55287 MIR222-201ENST00000384992 110 ntBASIC0.96□□□□□ -2.26
CDH11P55287 HMGN1P33-201ENST00000432945 451 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms