Protein–RNA interactions for Protein: P53804

TTC3, E3 ubiquitin-protein ligase TTC3, humanhuman

Predictions only

Length 2,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3P53804 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.61□□□□□ -2.15
TTC3P53804 MIR548AR-201ENST00000582191 57 ntBASIC1.61□□□□□ -2.15
TTC3P53804 Z82195.2-201ENST00000612348 18351 ntBASIC1.61□□□□□ -2.15
TTC3P53804 AL157834.3-201ENST00000615543 103 ntBASIC1.61□□□□□ -2.15
TTC3P53804 AL513423.1-201ENST00000621695 132 ntBASIC1.61□□□□□ -2.15
TTC3P53804 U6.95-201ENST00000636931 70 ntBASIC1.61□□□□□ -2.15
TTC3P53804 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
TTC3P53804 SNORD115-34-201ENST00000362441 82 ntBASIC1.6□□□□□ -2.15
TTC3P53804 SNORD115-12-201ENST00000362583 82 ntBASIC1.6□□□□□ -2.15
TTC3P53804 SNORD115-29-201ENST00000362834 82 ntBASIC1.6□□□□□ -2.15
TTC3P53804 SNORD115-9-201ENST00000362912 82 ntBASIC1.6□□□□□ -2.15
TTC3P53804 SNORD115-21-201ENST00000362963 81 ntBASIC1.6□□□□□ -2.15
TTC3P53804 SNORD115-14-201ENST00000363090 81 ntBASIC1.6□□□□□ -2.15
TTC3P53804 SNORD115-13-201ENST00000363358 82 ntBASIC1.6□□□□□ -2.15
TTC3P53804 SNORD115-41-201ENST00000363608 82 ntBASIC1.6□□□□□ -2.15
TTC3P53804 SNORD115-11-201ENST00000363616 82 ntBASIC1.6□□□□□ -2.15
TTC3P53804 SNORD115-5-201ENST00000363633 82 ntBASIC1.6□□□□□ -2.15
TTC3P53804 SNORD115-39-201ENST00000363694 82 ntBASIC1.6□□□□□ -2.15
TTC3P53804 SNORD115-4-201ENST00000363810 82 ntBASIC1.6□□□□□ -2.15
TTC3P53804 SNORD115-16-201ENST00000363887 82 ntBASIC1.6□□□□□ -2.15
TTC3P53804 SNORD115-6-201ENST00000363942 82 ntBASIC1.6□□□□□ -2.15
TTC3P53804 SNORD115-42-201ENST00000364273 82 ntBASIC1.6□□□□□ -2.15
TTC3P53804 SNORD115-15-201ENST00000364809 81 ntBASIC1.6□□□□□ -2.15
TTC3P53804 RNU6-1107P-201ENST00000364817 104 ntBASIC1.6□□□□□ -2.15
TTC3P53804 SNORD115-1-201ENST00000364961 82 ntBASIC1.6□□□□□ -2.15
TTC3P53804 SNORD115-26-201ENST00000365067 82 ntBASIC1.6□□□□□ -2.15
TTC3P53804 SNORD115-10-201ENST00000365073 81 ntBASIC1.6□□□□□ -2.15
TTC3P53804 SNORD115-43-201ENST00000365503 82 ntBASIC1.6□□□□□ -2.15
TTC3P53804 SNORD115-36-201ENST00000365629 82 ntBASIC1.6□□□□□ -2.15
TTC3P53804 SNORD24-201ENST00000383884 75 ntBASIC1.6□□□□□ -2.15
TTC3P53804 Y_RNA.508-201ENST00000384502 114 ntBASIC1.6□□□□□ -2.15
TTC3P53804 MIR518F-201ENST00000384973 87 ntBASIC1.6□□□□□ -2.15
TTC3P53804 MT-TI-201ENST00000387365 69 ntBASIC1.6□□□□□ -2.15
TTC3P53804 RNU6-602P-201ENST00000411155 105 ntBASIC1.6□□□□□ -2.15
TTC3P53804 COX6CP6-201ENST00000490840 228 ntBASIC1.6□□□□□ -2.15
TTC3P53804 RNU6-1149P-201ENST00000516810 97 ntBASIC1.6□□□□□ -2.15
TTC3P53804 SUMO2P16-201ENST00000519475 264 ntBASIC1.6□□□□□ -2.15
TTC3P53804 MIR4709-201ENST00000577272 72 ntBASIC1.6□□□□□ -2.15
TTC3P53804 SNORD115-40-201ENST00000606510 82 ntBASIC1.6□□□□□ -2.15
TTC3P53804 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.6□□□□□ -2.15
TTC3P53804 AL359851.1-201ENST00000569460 4997 ntBASIC1.6□□□□□ -2.15
TTC3P53804 MIR302B-201ENST00000362188 73 ntBASIC1.59□□□□□ -2.15
TTC3P53804 MIR516B2-201ENST00000385190 85 ntBASIC1.59□□□□□ -2.15
TTC3P53804 RNU6-1319P-201ENST00000390855 104 ntBASIC1.59□□□□□ -2.15
TTC3P53804 RNU6-747P-201ENST00000390928 104 ntBASIC1.59□□□□□ -2.15
TTC3P53804 SNORA67.6-201ENST00000391093 99 ntBASIC1.59□□□□□ -2.15
TTC3P53804 RNU6-241P-201ENST00000391148 104 ntBASIC1.59□□□□□ -2.15
TTC3P53804 MIR1267-201ENST00000408723 78 ntBASIC1.59□□□□□ -2.15
TTC3P53804 RNA5SP100-201ENST00000410903 110 ntBASIC1.59□□□□□ -2.15
TTC3P53804 RNA5SP59-201ENST00000410922 110 ntBASIC1.59□□□□□ -2.15
TTC3P53804 RNU6-177P-201ENST00000411257 104 ntBASIC1.59□□□□□ -2.15
TTC3P53804 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.59□□□□□ -2.15
TTC3P53804 MTATP6P21-201ENST00000440681 189 ntBASIC1.59□□□□□ -2.15
TTC3P53804 RPL23AP6-201ENST00000446637 472 ntBASIC1.59□□□□□ -2.15
TTC3P53804 RNVU1-2-201ENST00000516326 135 ntBASIC1.59□□□□□ -2.15
TTC3P53804 Y_RNA.677-201ENST00000516401 85 ntBASIC1.59□□□□□ -2.15
TTC3P53804 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.59□□□□□ -2.15
TTC3P53804 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.59□□□□□ -2.15
TTC3P53804 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.59□□□□□ -2.15
TTC3P53804 RNU6-203P-201ENST00000384038 104 ntBASIC1.59□□□□□ -2.16
TTC3P53804 MIR526A1-201ENST00000384897 85 ntBASIC1.59□□□□□ -2.16
TTC3P53804 MIR759-201ENST00000390224 91 ntBASIC1.59□□□□□ -2.16
TTC3P53804 MIR802-201ENST00000390235 94 ntBASIC1.59□□□□□ -2.16
TTC3P53804 AC009474.2-201ENST00000451383 136 ntBASIC1.59□□□□□ -2.16
TTC3P53804 AC093850.1-201ENST00000454121 251 ntBASIC1.59□□□□□ -2.16
TTC3P53804 MIR3152-201ENST00000579801 74 ntBASIC1.59□□□□□ -2.16
TTC3P53804 MIR4305-201ENST00000583252 102 ntBASIC1.59□□□□□ -2.16
TTC3P53804 AC015726.2-201ENST00000620112 122 ntBASIC1.59□□□□□ -2.16
TTC3P53804 AL596211.1-201ENST00000569873 2277 ntBASIC1.58□□□□□ -2.16
TTC3P53804 MIR548A1-201ENST00000385041 97 ntBASIC1.58□□□□□ -2.16
TTC3P53804 SUMO2P12-201ENST00000405924 140 ntBASIC1.58□□□□□ -2.16
TTC3P53804 HSPE1P9-201ENST00000440046 311 ntBASIC1.58□□□□□ -2.16
TTC3P53804 SNORA31.10-201ENST00000516482 106 ntBASIC1.58□□□□□ -2.16
TTC3P53804 FAM106DP-201ENST00000586416 501 ntBASIC1.58□□□□□ -2.16
TTC3P53804 AC095038.3-201ENST00000634439 195 ntBASIC1.58□□□□□ -2.16
TTC3P53804 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
TTC3P53804 MIR660-201ENST00000385235 97 ntBASIC1.57□□□□□ -2.16
TTC3P53804 AL034345.1-201ENST00000407768 123 ntBASIC1.57□□□□□ -2.16
TTC3P53804 MIR1304-201ENST00000408243 91 ntBASIC1.57□□□□□ -2.16
TTC3P53804 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.57□□□□□ -2.16
TTC3P53804 RNU7-73P-201ENST00000458743 63 ntBASIC1.57□□□□□ -2.16
TTC3P53804 SNORA18.7-201ENST00000516910 131 ntBASIC1.57□□□□□ -2.16
TTC3P53804 AC090821.2-201ENST00000523552 176 ntBASIC1.57□□□□□ -2.16
TTC3P53804 MIR4679-2-201ENST00000578358 77 ntBASIC1.57□□□□□ -2.16
TTC3P53804 Y_RNA.327-201ENST00000365201 102 ntBASIC1.57□□□□□ -2.16
TTC3P53804 Y_RNA.348-201ENST00000365403 103 ntBASIC1.57□□□□□ -2.16
TTC3P53804 SNORD116-21-201ENST00000384507 92 ntBASIC1.57□□□□□ -2.16
TTC3P53804 MIR452-201ENST00000385020 85 ntBASIC1.57□□□□□ -2.16
TTC3P53804 SNORA26.6-201ENST00000391256 115 ntBASIC1.57□□□□□ -2.16
TTC3P53804 MIR1263-201ENST00000408324 86 ntBASIC1.57□□□□□ -2.16
TTC3P53804 RPL31P63-201ENST00000422565 375 ntBASIC1.57□□□□□ -2.16
TTC3P53804 RNU7-34P-201ENST00000459394 64 ntBASIC1.57□□□□□ -2.16
TTC3P53804 RPS27P21-201ENST00000486977 252 ntBASIC1.57□□□□□ -2.16
TTC3P53804 MIR4778-201ENST00000577635 80 ntBASIC1.57□□□□□ -2.16
TTC3P53804 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.57□□□□□ -2.16
TTC3P53804 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.57□□□□□ -2.16
TTC3P53804 RNU6-1067P-201ENST00000384752 107 ntBASIC1.56□□□□□ -2.16
TTC3P53804 SNX2P2-201ENST00000424553 323 ntBASIC1.56□□□□□ -2.16
TTC3P53804 STAG3L5P-204ENST00000443759 179 ntBASIC1.56□□□□□ -2.16
TTC3P53804 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms