Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 MTATP6P21-201ENST00000440681 189 ntBASIC1.58□□□□□ -2.16
COPB1P53618 snoU13.9-201ENST00000458927 103 ntBASIC1.58□□□□□ -2.16
COPB1P53618 RNU6-998P-201ENST00000515894 101 ntBASIC1.58□□□□□ -2.16
COPB1P53618 SNORA44.1-201ENST00000517031 108 ntBASIC1.58□□□□□ -2.16
COPB1P53618 AL022345.2-201ENST00000606307 135 ntBASIC1.58□□□□□ -2.16
COPB1P53618 AC011603.4-201ENST00000611325 277 ntBASIC1.58□□□□□ -2.16
COPB1P53618 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.58□□□□□ -2.16
COPB1P53618 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
COPB1P53618 RNU6-1211P-201ENST00000459179 105 ntBASIC1.57□□□□□ -2.16
COPB1P53618 RNU7-96P-201ENST00000459535 64 ntBASIC1.57□□□□□ -2.16
COPB1P53618 RPS29P24-201ENST00000486345 171 ntBASIC1.57□□□□□ -2.16
COPB1P53618 RNU6-322P-201ENST00000516010 103 ntBASIC1.57□□□□□ -2.16
COPB1P53618 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.57□□□□□ -2.16
COPB1P53618 MIR4303-201ENST00000581299 66 ntBASIC1.57□□□□□ -2.16
COPB1P53618 Y_RNA.71-201ENST00000362892 104 ntBASIC1.56□□□□□ -2.16
COPB1P53618 Y_RNA.114-201ENST00000363265 113 ntBASIC1.56□□□□□ -2.16
COPB1P53618 Y_RNA.537-201ENST00000384626 109 ntBASIC1.56□□□□□ -2.16
COPB1P53618 AL451046.2-201ENST00000403074 277 ntBASIC1.56□□□□□ -2.16
COPB1P53618 AL158147.1-201ENST00000443970 75 ntBASIC1.56□□□□□ -2.16
COPB1P53618 RNU7-80P-201ENST00000459562 61 ntBASIC1.56□□□□□ -2.16
COPB1P53618 AC107297.1-201ENST00000459991 176 ntBASIC1.56□□□□□ -2.16
COPB1P53618 RNU7-43P-201ENST00000516554 64 ntBASIC1.56□□□□□ -2.16
COPB1P53618 Y_RNA.757-201ENST00000578934 114 ntBASIC1.56□□□□□ -2.16
COPB1P53618 MIR4764-201ENST00000580680 88 ntBASIC1.56□□□□□ -2.16
COPB1P53618 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.56□□□□□ -2.16
COPB1P53618 MIR8070-201ENST00000616510 88 ntBASIC1.56□□□□□ -2.16
COPB1P53618 AC091932.4-201ENST00000623386 200 ntBASIC1.56□□□□□ -2.16
COPB1P53618 RNU6-349P-201ENST00000362402 107 ntBASIC1.55□□□□□ -2.16
COPB1P53618 Y_RNA.118-201ENST00000363300 101 ntBASIC1.55□□□□□ -2.16
COPB1P53618 RNU6-60P-201ENST00000364792 103 ntBASIC1.55□□□□□ -2.16
COPB1P53618 RNU6-1117P-201ENST00000384525 104 ntBASIC1.55□□□□□ -2.16
COPB1P53618 MIR570-201ENST00000384917 97 ntBASIC1.55□□□□□ -2.16
COPB1P53618 SNORA67.6-201ENST00000391093 99 ntBASIC1.55□□□□□ -2.16
COPB1P53618 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.55□□□□□ -2.16
COPB1P53618 HSPE1P24-201ENST00000450782 238 ntBASIC1.55□□□□□ -2.16
COPB1P53618 RNU7-95P-201ENST00000459222 64 ntBASIC1.55□□□□□ -2.16
COPB1P53618 RNU6-113P-201ENST00000516653 101 ntBASIC1.55□□□□□ -2.16
COPB1P53618 RNU6-922P-201ENST00000516753 99 ntBASIC1.55□□□□□ -2.16
COPB1P53618 RNU1-92P-201ENST00000517017 135 ntBASIC1.55□□□□□ -2.16
COPB1P53618 MIR3198-2-201ENST00000577868 80 ntBASIC1.55□□□□□ -2.16
COPB1P53618 MIR4791-201ENST00000607666 84 ntBASIC1.55□□□□□ -2.16
COPB1P53618 MIR7974-201ENST00000615835 79 ntBASIC1.55□□□□□ -2.16
COPB1P53618 MIR8063-201ENST00000621930 81 ntBASIC1.55□□□□□ -2.16
COPB1P53618 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.55□□□□□ -2.16
COPB1P53618 RNU6-80P-201ENST00000384195 107 ntBASIC1.54□□□□□ -2.16
COPB1P53618 Y_RNA.454-201ENST00000384224 113 ntBASIC1.54□□□□□ -2.16
COPB1P53618 RNU6-22P-201ENST00000384355 107 ntBASIC1.54□□□□□ -2.16
COPB1P53618 AL035398.1-201ENST00000430869 322 ntBASIC1.54□□□□□ -2.16
COPB1P53618 AC027119.1-201ENST00000440877 241 ntBASIC1.54□□□□□ -2.16
COPB1P53618 RPS29P29-201ENST00000456396 171 ntBASIC1.54□□□□□ -2.16
COPB1P53618 RNU6-1234P-201ENST00000516877 103 ntBASIC1.54□□□□□ -2.16
COPB1P53618 SNORA31.24-201ENST00000517232 57 ntBASIC1.54□□□□□ -2.16
COPB1P53618 AC108081.1-201ENST00000604358 221 ntBASIC1.54□□□□□ -2.16
COPB1P53618 AL645939.4-201ENST00000604495 135 ntBASIC1.54□□□□□ -2.16
COPB1P53618 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.54□□□□□ -2.16
COPB1P53618 AC243994.1-201ENST00000618627 109 ntBASIC1.54□□□□□ -2.16
COPB1P53618 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
COPB1P53618 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.53□□□□□ -2.16
COPB1P53618 RNU1-133P-201ENST00000364867 167 ntBASIC1.53□□□□□ -2.16
COPB1P53618 Y_RNA.508-201ENST00000384502 114 ntBASIC1.53□□□□□ -2.16
COPB1P53618 MIR520C-201ENST00000385005 87 ntBASIC1.53□□□□□ -2.16
COPB1P53618 Y_RNA.617-201ENST00000410920 90 ntBASIC1.53□□□□□ -2.16
COPB1P53618 GHRLOS.1-201ENST00000610995 70 ntBASIC1.53□□□□□ -2.16
COPB1P53618 AL365222.1-201ENST00000614661 98 ntBASIC1.53□□□□□ -2.16
COPB1P53618 AC008133.2-201ENST00000624540 351 ntBASIC1.53□□□□□ -2.16
COPB1P53618 Y_RNA.327-201ENST00000365201 102 ntBASIC1.52□□□□□ -2.17
COPB1P53618 SNORD116-14-201ENST00000383894 92 ntBASIC1.52□□□□□ -2.17
COPB1P53618 SNORD116-17-201ENST00000383929 92 ntBASIC1.52□□□□□ -2.17
COPB1P53618 SNORD116-15-201ENST00000384445 92 ntBASIC1.52□□□□□ -2.17
COPB1P53618 SNORD116-19-201ENST00000384729 92 ntBASIC1.52□□□□□ -2.17
COPB1P53618 RNU1-78P-201ENST00000391248 165 ntBASIC1.52□□□□□ -2.17
COPB1P53618 MIR548I2-201ENST00000408348 149 ntBASIC1.52□□□□□ -2.17
COPB1P53618 RNU7-73P-201ENST00000458743 63 ntBASIC1.52□□□□□ -2.17
COPB1P53618 RNU2-11P-201ENST00000459191 187 ntBASIC1.52□□□□□ -2.17
COPB1P53618 AC079140.2-201ENST00000506193 142 ntBASIC1.52□□□□□ -2.17
COPB1P53618 RNU7-41P-201ENST00000515917 61 ntBASIC1.52□□□□□ -2.17
COPB1P53618 RNU6-958P-201ENST00000516995 106 ntBASIC1.52□□□□□ -2.17
COPB1P53618 IGKV1-22-201ENST00000524313 326 ntBASIC1.52□□□□□ -2.17
COPB1P53618 AL096861.1-201ENST00000610899 123 ntBASIC1.52□□□□□ -2.17
COPB1P53618 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
COPB1P53618 MIR7111-201ENST00000619751 72 ntBASIC1.52□□□□□ -2.17
COPB1P53618 AL596211.1-201ENST00000569873 2277 ntBASIC1.52□□□□□ -2.17
COPB1P53618 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.51□□□□□ -2.17
COPB1P53618 MIR342-201ENST00000362212 99 ntBASIC1.51□□□□□ -2.17
COPB1P53618 RNU6-235P-201ENST00000362644 107 ntBASIC1.51□□□□□ -2.17
COPB1P53618 SNORD33-201ENST00000362761 85 ntBASIC1.51□□□□□ -2.17
COPB1P53618 Y_RNA.127-201ENST00000363386 109 ntBASIC1.51□□□□□ -2.17
COPB1P53618 RNU6-647P-201ENST00000364243 107 ntBASIC1.51□□□□□ -2.17
COPB1P53618 SNORA70.7-201ENST00000384159 133 ntBASIC1.51□□□□□ -2.17
COPB1P53618 RNU6-913P-201ENST00000390913 95 ntBASIC1.51□□□□□ -2.17
COPB1P53618 RNU6-955P-201ENST00000410497 104 ntBASIC1.51□□□□□ -2.17
COPB1P53618 SNX2P2-201ENST00000424553 323 ntBASIC1.51□□□□□ -2.17
COPB1P53618 RNU7-67P-201ENST00000459003 62 ntBASIC1.51□□□□□ -2.17
COPB1P53618 RNU7-107P-201ENST00000459121 61 ntBASIC1.51□□□□□ -2.17
COPB1P53618 RNU5E-3P-201ENST00000515913 68 ntBASIC1.51□□□□□ -2.17
COPB1P53618 RNU6-659P-201ENST00000516454 104 ntBASIC1.51□□□□□ -2.17
COPB1P53618 RNU7-70P-201ENST00000516941 66 ntBASIC1.51□□□□□ -2.17
COPB1P53618 MIR3192-201ENST00000584920 77 ntBASIC1.51□□□□□ -2.17
COPB1P53618 HSPE1P19-201ENST00000603327 295 ntBASIC1.51□□□□□ -2.17
COPB1P53618 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 180 ms