Protein–RNA interactions for Protein: P51955

NEK2, Serine/threonine-protein kinase Nek2, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2P51955 RNA5SP404-201ENST00000517118 132 ntBASIC1.41□□□□□ -2.18
NEK2P51955 AC091932.4-201ENST00000623386 200 ntBASIC1.41□□□□□ -2.18
NEK2P51955 MIR6516-201ENST00000630554 81 ntBASIC1.41□□□□□ -2.18
NEK2P51955 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
NEK2P51955 AL596211.1-201ENST00000569873 2277 ntBASIC1.41□□□□□ -2.18
NEK2P51955 RNU6-939P-201ENST00000384634 107 ntBASIC1.4□□□□□ -2.19
NEK2P51955 MIR19B1-201ENST00000384829 87 ntBASIC1.4□□□□□ -2.19
NEK2P51955 MT-TN-201ENST00000387400 73 ntBASIC1.4□□□□□ -2.19
NEK2P51955 AC108667.1-201ENST00000428618 249 ntBASIC1.4□□□□□ -2.19
NEK2P51955 RNU7-121P-201ENST00000516604 62 ntBASIC1.4□□□□□ -2.19
NEK2P51955 AL020996.3-201ENST00000606617 222 ntBASIC1.4□□□□□ -2.19
NEK2P51955 SNORD38B-201ENST00000384690 67 ntBASIC1.39□□□□□ -2.19
NEK2P51955 RNA5SP61-201ENST00000516453 100 ntBASIC1.39□□□□□ -2.19
NEK2P51955 MIR4264-201ENST00000583520 66 ntBASIC1.39□□□□□ -2.19
NEK2P51955 SNORD38B-202ENST00000625943 69 ntBASIC1.39□□□□□ -2.19
NEK2P51955 Z97988.1-201ENST00000637697 135 ntBASIC1.39□□□□□ -2.19
NEK2P51955 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
NEK2P51955 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
NEK2P51955 RNU1-124P-201ENST00000363861 145 ntBASIC1.38□□□□□ -2.19
NEK2P51955 RNU6-1336P-201ENST00000383886 109 ntBASIC1.38□□□□□ -2.19
NEK2P51955 SNORA17.3-201ENST00000391159 129 ntBASIC1.38□□□□□ -2.19
NEK2P51955 AC074198.2-201ENST00000508153 258 ntBASIC1.38□□□□□ -2.19
NEK2P51955 RNU1-92P-201ENST00000517017 135 ntBASIC1.38□□□□□ -2.19
NEK2P51955 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.38□□□□□ -2.19
NEK2P51955 MIR4303-201ENST00000581299 66 ntBASIC1.38□□□□□ -2.19
NEK2P51955 AC131055.1-201ENST00000584626 316 ntBASIC1.38□□□□□ -2.19
NEK2P51955 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.38□□□□□ -2.19
NEK2P51955 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
NEK2P51955 MIR377-201ENST00000362145 69 ntBASIC1.37□□□□□ -2.19
NEK2P51955 Y_RNA.52-201ENST00000362760 96 ntBASIC1.37□□□□□ -2.19
NEK2P51955 RNU6-1082P-201ENST00000364574 107 ntBASIC1.37□□□□□ -2.19
NEK2P51955 SNORA20-201ENST00000384662 132 ntBASIC1.37□□□□□ -2.19
NEK2P51955 SCARNA15-202ENST00000516881 127 ntBASIC1.37□□□□□ -2.19
NEK2P51955 SNORA31.24-201ENST00000517232 57 ntBASIC1.37□□□□□ -2.19
NEK2P51955 AC023827.1-201ENST00000569247 97 ntBASIC1.37□□□□□ -2.19
NEK2P51955 MIR3152-201ENST00000579801 74 ntBASIC1.37□□□□□ -2.19
NEK2P51955 MIR8055-201ENST00000610739 97 ntBASIC1.37□□□□□ -2.19
NEK2P51955 MTND5P32-201ENST00000560711 1802 ntBASIC1.37□□□□□ -2.19
NEK2P51955 MIR378A-201ENST00000362177 66 ntBASIC1.36□□□□□ -2.19
NEK2P51955 Y_RNA.150-201ENST00000363562 102 ntBASIC1.36□□□□□ -2.19
NEK2P51955 RNU6-654P-201ENST00000364373 107 ntBASIC1.36□□□□□ -2.19
NEK2P51955 SNORD113.3-201ENST00000364630 78 ntBASIC1.36□□□□□ -2.19
NEK2P51955 Y_RNA.354-201ENST00000365448 111 ntBASIC1.36□□□□□ -2.19
NEK2P51955 SNORA2B-201ENST00000384583 137 ntBASIC1.36□□□□□ -2.19
NEK2P51955 MIR200A-201ENST00000384875 90 ntBASIC1.36□□□□□ -2.19
NEK2P51955 SNORD111-201ENST00000408139 94 ntBASIC1.36□□□□□ -2.19
NEK2P51955 MTATP6P21-201ENST00000440681 189 ntBASIC1.36□□□□□ -2.19
NEK2P51955 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.36□□□□□ -2.19
NEK2P51955 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.36□□□□□ -2.19
NEK2P51955 AL512598.1-201ENST00000610158 273 ntBASIC1.36□□□□□ -2.19
NEK2P51955 RNU6-449P-201ENST00000383914 107 ntBASIC1.35□□□□□ -2.19
NEK2P51955 RNU6-886P-201ENST00000384319 105 ntBASIC1.35□□□□□ -2.19
NEK2P51955 RNU6-125P-201ENST00000384505 107 ntBASIC1.35□□□□□ -2.19
NEK2P51955 Y_RNA.555-201ENST00000384673 110 ntBASIC1.35□□□□□ -2.19
NEK2P51955 RNU4-62P-201ENST00000410125 130 ntBASIC1.35□□□□□ -2.19
NEK2P51955 RPS3AP1-201ENST00000413190 320 ntBASIC1.35□□□□□ -2.19
NEK2P51955 HMGN1P33-201ENST00000432945 451 ntBASIC1.35□□□□□ -2.19
NEK2P51955 AC106800.4-201ENST00000614905 153 ntBASIC1.35□□□□□ -2.19
NEK2P51955 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.35□□□□□ -2.19
NEK2P51955 MIR3658-201ENST00000636291 56 ntBASIC1.35□□□□□ -2.19
NEK2P51955 U8.1-201ENST00000362843 134 ntBASIC1.34□□□□□ -2.19
NEK2P51955 Y_RNA.168-201ENST00000363740 102 ntBASIC1.34□□□□□ -2.19
NEK2P51955 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.34□□□□□ -2.19
NEK2P51955 RNU6-588P-201ENST00000410281 105 ntBASIC1.34□□□□□ -2.19
NEK2P51955 MIR4781-201ENST00000585250 76 ntBASIC1.34□□□□□ -2.19
NEK2P51955 RNA5SP95-201ENST00000410319 137 ntBASIC1.33□□□□□ -2.2
NEK2P51955 RNU6-994P-201ENST00000410507 111 ntBASIC1.33□□□□□ -2.2
NEK2P51955 RNU6-1190P-201ENST00000410811 104 ntBASIC1.33□□□□□ -2.2
NEK2P51955 AC090844.1-201ENST00000422019 156 ntBASIC1.33□□□□□ -2.2
NEK2P51955 AC067940.1-201ENST00000458411 300 ntBASIC1.33□□□□□ -2.2
NEK2P51955 RPS23P4-201ENST00000487908 423 ntBASIC1.33□□□□□ -2.2
NEK2P51955 AC036111.3-201ENST00000526389 112 ntBASIC1.33□□□□□ -2.2
NEK2P51955 AC104465.1-201ENST00000611365 139 ntBASIC1.33□□□□□ -2.2
NEK2P51955 MIR6717-201ENST00000622747 73 ntBASIC1.33□□□□□ -2.2
NEK2P51955 ZNF209P-201ENST00000593450 2304 ntBASIC1.32□□□□□ -2.2
NEK2P51955 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
NEK2P51955 SNORD114-24-201ENST00000365029 72 ntBASIC1.32□□□□□ -2.2
NEK2P51955 SNORD18B-201ENST00000365659 72 ntBASIC1.32□□□□□ -2.2
NEK2P51955 RNU6-1319P-201ENST00000390855 104 ntBASIC1.32□□□□□ -2.2
NEK2P51955 RNU6-205P-201ENST00000390858 107 ntBASIC1.32□□□□□ -2.2
NEK2P51955 RNU6-747P-201ENST00000390928 104 ntBASIC1.32□□□□□ -2.2
NEK2P51955 RNU6-241P-201ENST00000391148 104 ntBASIC1.32□□□□□ -2.2
NEK2P51955 RNU6-177P-201ENST00000411257 104 ntBASIC1.32□□□□□ -2.2
NEK2P51955 BTF3P4-201ENST00000418852 495 ntBASIC1.32□□□□□ -2.2
NEK2P51955 FABP5P4-201ENST00000437203 171 ntBASIC1.32□□□□□ -2.2
NEK2P51955 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.32□□□□□ -2.2
NEK2P51955 Y_RNA.338-201ENST00000365320 114 ntBASIC1.31□□□□□ -2.2
NEK2P51955 SNORD116-18-201ENST00000383961 92 ntBASIC1.31□□□□□ -2.2
NEK2P51955 Y_RNA.497-201ENST00000384447 98 ntBASIC1.31□□□□□ -2.2
NEK2P51955 Y_RNA.580-201ENST00000391004 95 ntBASIC1.31□□□□□ -2.2
NEK2P51955 Y_RNA.584-201ENST00000391090 114 ntBASIC1.31□□□□□ -2.2
NEK2P51955 MIR942-201ENST00000401111 86 ntBASIC1.31□□□□□ -2.2
NEK2P51955 RNU6-602P-201ENST00000411155 105 ntBASIC1.31□□□□□ -2.2
NEK2P51955 RNU6-893P-201ENST00000458841 100 ntBASIC1.31□□□□□ -2.2
NEK2P51955 AC108729.3-201ENST00000513484 108 ntBASIC1.31□□□□□ -2.2
NEK2P51955 AC112693.2-201ENST00000556538 232 ntBASIC1.31□□□□□ -2.2
NEK2P51955 Y_RNA.778-201ENST00000620203 90 ntBASIC1.31□□□□□ -2.2
NEK2P51955 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.31□□□□□ -2.2
NEK2P51955 RNU6-151P-201ENST00000364158 107 ntBASIC1.3□□□□□ -2.2
NEK2P51955 RNU4-11P-201ENST00000365287 132 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 229.4 ms