Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.12□□□□□ -2.07
MRE11P49959 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.12□□□□□ -2.07
MRE11P49959 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
MRE11P49959 RNU6-755P-201ENST00000364400 103 ntBASIC2.11□□□□□ -2.07
MRE11P49959 Y_RNA.528-201ENST00000384575 108 ntBASIC2.11□□□□□ -2.07
MRE11P49959 MIR548A1-201ENST00000385041 97 ntBASIC2.11□□□□□ -2.07
MRE11P49959 RNA5SP136-201ENST00000410906 107 ntBASIC2.11□□□□□ -2.07
MRE11P49959 RNU7-34P-201ENST00000459394 64 ntBASIC2.11□□□□□ -2.07
MRE11P49959 AC021506.2-201ENST00000612354 169 ntBASIC2.11□□□□□ -2.07
MRE11P49959 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.11□□□□□ -2.07
MRE11P49959 RNU1-133P-201ENST00000364867 167 ntBASIC2.1□□□□□ -2.07
MRE11P49959 RNU6-690P-201ENST00000365242 106 ntBASIC2.1□□□□□ -2.07
MRE11P49959 Y_RNA.351-201ENST00000365436 96 ntBASIC2.1□□□□□ -2.07
MRE11P49959 SNORA22-201ENST00000383907 134 ntBASIC2.1□□□□□ -2.07
MRE11P49959 RNU6-880P-201ENST00000384526 107 ntBASIC2.1□□□□□ -2.07
MRE11P49959 MIR676-201ENST00000390702 67 ntBASIC2.1□□□□□ -2.07
MRE11P49959 AL627390.1-201ENST00000396055 340 ntBASIC2.1□□□□□ -2.07
MRE11P49959 AC004965.1-201ENST00000413033 213 ntBASIC2.1□□□□□ -2.07
MRE11P49959 AL445685.2-201ENST00000422551 342 ntBASIC2.1□□□□□ -2.07
MRE11P49959 RNU7-70P-201ENST00000516941 66 ntBASIC2.1□□□□□ -2.07
MRE11P49959 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.1□□□□□ -2.07
MRE11P49959 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.1□□□□□ -2.07
MRE11P49959 RNA5SP276-201ENST00000362580 94 ntBASIC2.09□□□□□ -2.07
MRE11P49959 RNA5SP363-201ENST00000365072 115 ntBASIC2.09□□□□□ -2.07
MRE11P49959 RNY1P6-201ENST00000384193 109 ntBASIC2.09□□□□□ -2.07
MRE11P49959 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.09□□□□□ -2.07
MRE11P49959 RNA5SP100-201ENST00000410903 110 ntBASIC2.09□□□□□ -2.07
MRE11P49959 RNA5SP59-201ENST00000410922 110 ntBASIC2.09□□□□□ -2.07
MRE11P49959 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.09□□□□□ -2.07
MRE11P49959 RNU7-95P-201ENST00000459222 64 ntBASIC2.09□□□□□ -2.07
MRE11P49959 snoU13.27-201ENST00000459278 104 ntBASIC2.09□□□□□ -2.07
MRE11P49959 RNU7-80P-201ENST00000459562 61 ntBASIC2.09□□□□□ -2.07
MRE11P49959 AC099513.1-201ENST00000490423 301 ntBASIC2.09□□□□□ -2.07
MRE11P49959 RNA5SP481-201ENST00000516814 122 ntBASIC2.09□□□□□ -2.07
MRE11P49959 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.09□□□□□ -2.07
MRE11P49959 MIR4709-201ENST00000577272 72 ntBASIC2.09□□□□□ -2.07
MRE11P49959 MIR4303-201ENST00000581299 66 ntBASIC2.09□□□□□ -2.07
MRE11P49959 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.09□□□□□ -2.07
MRE11P49959 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.09□□□□□ -2.07
MRE11P49959 Y_RNA.241-201ENST00000364470 117 ntBASIC2.08□□□□□ -2.08
MRE11P49959 SNORD114-22-201ENST00000365423 72 ntBASIC2.08□□□□□ -2.08
MRE11P49959 MIR598-201ENST00000384868 97 ntBASIC2.08□□□□□ -2.08
MRE11P49959 SNORA67.5-201ENST00000391036 107 ntBASIC2.08□□□□□ -2.08
MRE11P49959 RPL31P63-201ENST00000422565 375 ntBASIC2.08□□□□□ -2.08
MRE11P49959 AC093850.1-201ENST00000454121 251 ntBASIC2.08□□□□□ -2.08
MRE11P49959 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.08□□□□□ -2.08
MRE11P49959 COX6CP6-201ENST00000490840 228 ntBASIC2.08□□□□□ -2.08
MRE11P49959 RNA5SP102-201ENST00000516865 106 ntBASIC2.08□□□□□ -2.08
MRE11P49959 MIR3618-201ENST00000580330 88 ntBASIC2.08□□□□□ -2.08
MRE11P49959 AL512598.1-201ENST00000610158 273 ntBASIC2.08□□□□□ -2.08
MRE11P49959 AL513423.1-201ENST00000621695 132 ntBASIC2.08□□□□□ -2.08
MRE11P49959 AC091932.4-201ENST00000623386 200 ntBASIC2.08□□□□□ -2.08
MRE11P49959 Y_RNA.454-201ENST00000384224 113 ntBASIC2.07□□□□□ -2.08
MRE11P49959 SNORA27-201ENST00000384323 126 ntBASIC2.07□□□□□ -2.08
MRE11P49959 Y_RNA.494-201ENST00000384432 111 ntBASIC2.07□□□□□ -2.08
MRE11P49959 MIR570-201ENST00000384917 97 ntBASIC2.07□□□□□ -2.08
MRE11P49959 MIR452-201ENST00000385020 85 ntBASIC2.07□□□□□ -2.08
MRE11P49959 MIR516B2-201ENST00000385190 85 ntBASIC2.07□□□□□ -2.08
MRE11P49959 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.07□□□□□ -2.08
MRE11P49959 SNORA44.1-201ENST00000517031 108 ntBASIC2.07□□□□□ -2.08
MRE11P49959 RNU7-181P-201ENST00000517234 74 ntBASIC2.07□□□□□ -2.08
MRE11P49959 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
MRE11P49959 AL596211.1-201ENST00000569873 2277 ntBASIC2.07□□□□□ -2.08
MRE11P49959 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
MRE11P49959 SNORD115-34-201ENST00000362441 82 ntBASIC2.06□□□□□ -2.08
MRE11P49959 SNORD115-12-201ENST00000362583 82 ntBASIC2.06□□□□□ -2.08
MRE11P49959 SNORD115-29-201ENST00000362834 82 ntBASIC2.06□□□□□ -2.08
MRE11P49959 SNORD115-9-201ENST00000362912 82 ntBASIC2.06□□□□□ -2.08
MRE11P49959 SNORD115-21-201ENST00000362963 81 ntBASIC2.06□□□□□ -2.08
MRE11P49959 SNORD115-14-201ENST00000363090 81 ntBASIC2.06□□□□□ -2.08
MRE11P49959 SNORD115-13-201ENST00000363358 82 ntBASIC2.06□□□□□ -2.08
MRE11P49959 SNORD115-41-201ENST00000363608 82 ntBASIC2.06□□□□□ -2.08
MRE11P49959 SNORD115-11-201ENST00000363616 82 ntBASIC2.06□□□□□ -2.08
MRE11P49959 SNORD115-5-201ENST00000363633 82 ntBASIC2.06□□□□□ -2.08
MRE11P49959 SNORD115-39-201ENST00000363694 82 ntBASIC2.06□□□□□ -2.08
MRE11P49959 SNORD115-4-201ENST00000363810 82 ntBASIC2.06□□□□□ -2.08
MRE11P49959 SNORD115-16-201ENST00000363887 82 ntBASIC2.06□□□□□ -2.08
MRE11P49959 SNORD115-6-201ENST00000363942 82 ntBASIC2.06□□□□□ -2.08
MRE11P49959 SNORD115-42-201ENST00000364273 82 ntBASIC2.06□□□□□ -2.08
MRE11P49959 SNORD115-15-201ENST00000364809 81 ntBASIC2.06□□□□□ -2.08
MRE11P49959 SNORD115-1-201ENST00000364961 82 ntBASIC2.06□□□□□ -2.08
MRE11P49959 SNORD115-26-201ENST00000365067 82 ntBASIC2.06□□□□□ -2.08
MRE11P49959 SNORD115-10-201ENST00000365073 81 ntBASIC2.06□□□□□ -2.08
MRE11P49959 SNORD115-43-201ENST00000365503 82 ntBASIC2.06□□□□□ -2.08
MRE11P49959 SNORD115-36-201ENST00000365629 82 ntBASIC2.06□□□□□ -2.08
MRE11P49959 MIR660-201ENST00000385235 97 ntBASIC2.06□□□□□ -2.08
MRE11P49959 U8.17-201ENST00000391292 132 ntBASIC2.06□□□□□ -2.08
MRE11P49959 MIR1267-201ENST00000408723 78 ntBASIC2.06□□□□□ -2.08
MRE11P49959 RNY4P20-201ENST00000516678 93 ntBASIC2.06□□□□□ -2.08
MRE11P49959 AC090821.2-201ENST00000523552 176 ntBASIC2.06□□□□□ -2.08
MRE11P49959 MIR4713-201ENST00000582691 75 ntBASIC2.06□□□□□ -2.08
MRE11P49959 AC021443.1-201ENST00000604478 211 ntBASIC2.06□□□□□ -2.08
MRE11P49959 SNORD115-40-201ENST00000606510 82 ntBASIC2.06□□□□□ -2.08
MRE11P49959 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.06□□□□□ -2.08
MRE11P49959 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC2.06□□□□□ -2.08
MRE11P49959 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
MRE11P49959 MIR342-201ENST00000362212 99 ntBASIC2.05□□□□□ -2.08
MRE11P49959 Y_RNA.354-201ENST00000365448 111 ntBASIC2.05□□□□□ -2.08
MRE11P49959 SNX2P2-201ENST00000424553 323 ntBASIC2.05□□□□□ -2.08
MRE11P49959 PGBD4P5-201ENST00000445958 426 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms