Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 SNORD115-13-201ENST00000363358 82 ntBASIC1.21□□□□□ -2.22
CLK1P49759 SNORD115-41-201ENST00000363608 82 ntBASIC1.21□□□□□ -2.22
CLK1P49759 SNORD115-11-201ENST00000363616 82 ntBASIC1.21□□□□□ -2.22
CLK1P49759 SNORD115-5-201ENST00000363633 82 ntBASIC1.21□□□□□ -2.22
CLK1P49759 SNORD115-39-201ENST00000363694 82 ntBASIC1.21□□□□□ -2.22
CLK1P49759 SNORD115-4-201ENST00000363810 82 ntBASIC1.21□□□□□ -2.22
CLK1P49759 SNORD115-16-201ENST00000363887 82 ntBASIC1.21□□□□□ -2.22
CLK1P49759 SNORD115-6-201ENST00000363942 82 ntBASIC1.21□□□□□ -2.22
CLK1P49759 Y_RNA.218-201ENST00000364218 104 ntBASIC1.21□□□□□ -2.22
CLK1P49759 SNORD115-42-201ENST00000364273 82 ntBASIC1.21□□□□□ -2.22
CLK1P49759 RNU6-309P-201ENST00000364573 106 ntBASIC1.21□□□□□ -2.22
CLK1P49759 SNORD115-15-201ENST00000364809 81 ntBASIC1.21□□□□□ -2.22
CLK1P49759 Y_RNA.294-201ENST00000364916 102 ntBASIC1.21□□□□□ -2.22
CLK1P49759 SNORD115-1-201ENST00000364961 82 ntBASIC1.21□□□□□ -2.22
CLK1P49759 SNORD115-26-201ENST00000365067 82 ntBASIC1.21□□□□□ -2.22
CLK1P49759 SNORD115-10-201ENST00000365073 81 ntBASIC1.21□□□□□ -2.22
CLK1P49759 SNORA2.2-201ENST00000365473 135 ntBASIC1.21□□□□□ -2.22
CLK1P49759 SNORD115-43-201ENST00000365503 82 ntBASIC1.21□□□□□ -2.22
CLK1P49759 SNORD115-36-201ENST00000365629 82 ntBASIC1.21□□□□□ -2.22
CLK1P49759 RNU6-959P-201ENST00000384671 107 ntBASIC1.21□□□□□ -2.22
CLK1P49759 SNORD41-201ENST00000386967 70 ntBASIC1.21□□□□□ -2.22
CLK1P49759 RNU4-62P-201ENST00000410125 130 ntBASIC1.21□□□□□ -2.22
CLK1P49759 RPS23P4-201ENST00000487908 423 ntBASIC1.21□□□□□ -2.22
CLK1P49759 RNU6-971P-201ENST00000516920 106 ntBASIC1.21□□□□□ -2.22
CLK1P49759 RNU1-92P-201ENST00000517017 135 ntBASIC1.21□□□□□ -2.22
CLK1P49759 SNORA74.3-201ENST00000517108 154 ntBASIC1.21□□□□□ -2.22
CLK1P49759 SNORA70.22-201ENST00000517160 124 ntBASIC1.21□□□□□ -2.22
CLK1P49759 AC090049.2-201ENST00000550377 109 ntBASIC1.21□□□□□ -2.22
CLK1P49759 DNAJC19P9-201ENST00000555084 351 ntBASIC1.21□□□□□ -2.22
CLK1P49759 MIR548AR-201ENST00000582191 57 ntBASIC1.21□□□□□ -2.22
CLK1P49759 FAM106DP-201ENST00000586416 501 ntBASIC1.21□□□□□ -2.22
CLK1P49759 SNORD115-40-201ENST00000606510 82 ntBASIC1.21□□□□□ -2.22
CLK1P49759 AL391516.1-201ENST00000554380 2449 ntBASIC1.21□□□□□ -2.22
CLK1P49759 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.2□□□□□ -2.22
CLK1P49759 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
CLK1P49759 SNORA40.5-201ENST00000391061 128 ntBASIC1.2□□□□□ -2.22
CLK1P49759 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.2□□□□□ -2.22
CLK1P49759 AC108667.1-201ENST00000428618 249 ntBASIC1.2□□□□□ -2.22
CLK1P49759 AC009474.2-201ENST00000451383 136 ntBASIC1.2□□□□□ -2.22
CLK1P49759 Y_RNA.690-201ENST00000516603 95 ntBASIC1.2□□□□□ -2.22
CLK1P49759 SNORA18.7-201ENST00000516910 131 ntBASIC1.2□□□□□ -2.22
CLK1P49759 AC090821.2-201ENST00000523552 176 ntBASIC1.2□□□□□ -2.22
CLK1P49759 AC068338.1-201ENST00000565567 176 ntBASIC1.2□□□□□ -2.22
CLK1P49759 MIR4421-201ENST00000578133 69 ntBASIC1.2□□□□□ -2.22
CLK1P49759 MIR3121-201ENST00000579680 77 ntBASIC1.2□□□□□ -2.22
CLK1P49759 MIR4661-201ENST00000582720 75 ntBASIC1.2□□□□□ -2.22
CLK1P49759 AP000942.3-201ENST00000603702 160 ntBASIC1.2□□□□□ -2.22
CLK1P49759 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.2□□□□□ -2.22
CLK1P49759 Y_RNA.241-201ENST00000364470 117 ntBASIC1.19□□□□□ -2.22
CLK1P49759 SNORA24-201ENST00000384096 131 ntBASIC1.19□□□□□ -2.22
CLK1P49759 SNORA27-201ENST00000384323 126 ntBASIC1.19□□□□□ -2.22
CLK1P49759 RNU1-123P-201ENST00000458950 160 ntBASIC1.19□□□□□ -2.22
CLK1P49759 RNU7-95P-201ENST00000459222 64 ntBASIC1.19□□□□□ -2.22
CLK1P49759 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.19□□□□□ -2.22
CLK1P49759 TUG1_4.1-201ENST00000619464 181 ntBASIC1.19□□□□□ -2.22
CLK1P49759 RNA5SP99-201ENST00000364020 114 ntBASIC1.18□□□□□ -2.22
CLK1P49759 RPS29P24-201ENST00000486345 171 ntBASIC1.18□□□□□ -2.22
CLK1P49759 RNU6-998P-201ENST00000515894 101 ntBASIC1.18□□□□□ -2.22
CLK1P49759 MIR378A-201ENST00000362177 66 ntBASIC1.17□□□□□ -2.22
CLK1P49759 Y_RNA.71-201ENST00000362892 104 ntBASIC1.17□□□□□ -2.22
CLK1P49759 Y_RNA.114-201ENST00000363265 113 ntBASIC1.17□□□□□ -2.22
CLK1P49759 SNORA7.1-201ENST00000363750 139 ntBASIC1.17□□□□□ -2.22
CLK1P49759 MIR570-201ENST00000384917 97 ntBASIC1.17□□□□□ -2.22
CLK1P49759 AP1B1P2-201ENST00000416196 106 ntBASIC1.17□□□□□ -2.22
CLK1P49759 AL606753.1-201ENST00000427435 87 ntBASIC1.17□□□□□ -2.22
CLK1P49759 RNU6-1211P-201ENST00000459179 105 ntBASIC1.17□□□□□ -2.22
CLK1P49759 RNU7-96P-201ENST00000459535 64 ntBASIC1.17□□□□□ -2.22
CLK1P49759 Y_RNA.692-201ENST00000516627 105 ntBASIC1.17□□□□□ -2.22
CLK1P49759 RNU6-922P-201ENST00000516753 99 ntBASIC1.17□□□□□ -2.22
CLK1P49759 RNU6-1234P-201ENST00000516877 103 ntBASIC1.17□□□□□ -2.22
CLK1P49759 MIR3660-201ENST00000584845 100 ntBASIC1.17□□□□□ -2.22
CLK1P49759 AL513534.2-201ENST00000603836 250 ntBASIC1.17□□□□□ -2.22
CLK1P49759 AC108081.1-201ENST00000604358 221 ntBASIC1.17□□□□□ -2.22
CLK1P49759 AC011603.4-201ENST00000611325 277 ntBASIC1.17□□□□□ -2.22
CLK1P49759 AC091932.4-201ENST00000623386 200 ntBASIC1.17□□□□□ -2.22
CLK1P49759 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.17□□□□□ -2.22
CLK1P49759 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.17□□□□□ -2.22
CLK1P49759 RNU6-349P-201ENST00000362402 107 ntBASIC1.16□□□□□ -2.22
CLK1P49759 SNORA1.2-201ENST00000365189 134 ntBASIC1.16□□□□□ -2.22
CLK1P49759 Y_RNA.351-201ENST00000365436 96 ntBASIC1.16□□□□□ -2.22
CLK1P49759 Y_RNA.370-201ENST00000365589 108 ntBASIC1.16□□□□□ -2.22
CLK1P49759 MIR539-201ENST00000365690 78 ntBASIC1.16□□□□□ -2.22
CLK1P49759 SNORA40.6-201ENST00000391153 128 ntBASIC1.16□□□□□ -2.22
CLK1P49759 MTATP6P21-201ENST00000440681 189 ntBASIC1.16□□□□□ -2.22
CLK1P49759 AL158147.1-201ENST00000443970 75 ntBASIC1.16□□□□□ -2.22
CLK1P49759 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.16□□□□□ -2.22
CLK1P49759 RNU6-237P-201ENST00000515985 71 ntBASIC1.16□□□□□ -2.22
CLK1P49759 RNU7-43P-201ENST00000516554 64 ntBASIC1.16□□□□□ -2.22
CLK1P49759 IGKV1-22-201ENST00000524313 326 ntBASIC1.16□□□□□ -2.22
CLK1P49759 MIR4764-201ENST00000580680 88 ntBASIC1.16□□□□□ -2.22
CLK1P49759 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.16□□□□□ -2.22
CLK1P49759 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.16□□□□□ -2.22
CLK1P49759 AL365222.1-201ENST00000614661 98 ntBASIC1.16□□□□□ -2.22
CLK1P49759 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
CLK1P49759 RNU6-235P-201ENST00000362644 107 ntBASIC1.15□□□□□ -2.23
CLK1P49759 SNORD18B-201ENST00000365659 72 ntBASIC1.15□□□□□ -2.23
CLK1P49759 SNORD116-14-201ENST00000383894 92 ntBASIC1.15□□□□□ -2.23
CLK1P49759 SNORD116-17-201ENST00000383929 92 ntBASIC1.15□□□□□ -2.23
CLK1P49759 RNU6-22P-201ENST00000384355 107 ntBASIC1.15□□□□□ -2.23
CLK1P49759 SNORD116-15-201ENST00000384445 92 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms