Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 RNU2-11P-201ENST00000459191 187 ntBASIC1.22□□□□□ -2.21
CENPAP49450 RNU6-998P-201ENST00000515894 101 ntBASIC1.22□□□□□ -2.21
CENPAP49450 MIR3646-201ENST00000578301 84 ntBASIC1.22□□□□□ -2.21
CENPAP49450 HSPE1P19-201ENST00000603327 295 ntBASIC1.22□□□□□ -2.21
CENPAP49450 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.22□□□□□ -2.21
CENPAP49450 AL596211.1-201ENST00000569873 2277 ntBASIC1.22□□□□□ -2.21
CENPAP49450 Y_RNA.164-201ENST00000363709 102 ntBASIC1.21□□□□□ -2.22
CENPAP49450 RNU6-151P-201ENST00000364158 107 ntBASIC1.21□□□□□ -2.22
CENPAP49450 Y_RNA.226-201ENST00000364337 114 ntBASIC1.21□□□□□ -2.22
CENPAP49450 Y_RNA.330-201ENST00000365230 109 ntBASIC1.21□□□□□ -2.22
CENPAP49450 SNORA24-201ENST00000384096 131 ntBASIC1.21□□□□□ -2.22
CENPAP49450 Y_RNA.454-201ENST00000384224 113 ntBASIC1.21□□□□□ -2.22
CENPAP49450 PCNPP3-201ENST00000393579 471 ntBASIC1.21□□□□□ -2.22
CENPAP49450 RNU6-1149P-201ENST00000516810 97 ntBASIC1.21□□□□□ -2.22
CENPAP49450 MIR548AO-201ENST00000579992 96 ntBASIC1.21□□□□□ -2.22
CENPAP49450 MIR4781-201ENST00000585250 76 ntBASIC1.21□□□□□ -2.22
CENPAP49450 PRELID3BP2-201ENST00000605362 201 ntBASIC1.21□□□□□ -2.22
CENPAP49450 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CENPAP49450 ZNF209P-201ENST00000593450 2304 ntBASIC1.2□□□□□ -2.22
CENPAP49450 RNU4-11P-201ENST00000365287 132 ntBASIC1.2□□□□□ -2.22
CENPAP49450 RNU6-1130P-201ENST00000365434 107 ntBASIC1.2□□□□□ -2.22
CENPAP49450 RNU6-394P-201ENST00000410735 107 ntBASIC1.2□□□□□ -2.22
CENPAP49450 OR2A41P-201ENST00000473586 105 ntBASIC1.2□□□□□ -2.22
CENPAP49450 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.2□□□□□ -2.22
CENPAP49450 MIR3144-201ENST00000579460 79 ntBASIC1.2□□□□□ -2.22
CENPAP49450 AL359821.1-201ENST00000605519 182 ntBASIC1.2□□□□□ -2.22
CENPAP49450 AL022345.2-201ENST00000606307 135 ntBASIC1.2□□□□□ -2.22
CENPAP49450 MTND5P32-201ENST00000560711 1802 ntBASIC1.19□□□□□ -2.22
CENPAP49450 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CENPAP49450 RNU1-133P-201ENST00000364867 167 ntBASIC1.19□□□□□ -2.22
CENPAP49450 SNORA25-201ENST00000384384 134 ntBASIC1.19□□□□□ -2.22
CENPAP49450 RNU6-913P-201ENST00000390913 95 ntBASIC1.19□□□□□ -2.22
CENPAP49450 MIR548I3-201ENST00000408378 149 ntBASIC1.19□□□□□ -2.22
CENPAP49450 MIR1185-1-201ENST00000408598 86 ntBASIC1.19□□□□□ -2.22
CENPAP49450 RNU4-62P-201ENST00000410125 130 ntBASIC1.19□□□□□ -2.22
CENPAP49450 RNU7-73P-201ENST00000458743 63 ntBASIC1.19□□□□□ -2.22
CENPAP49450 MIR4303-201ENST00000581299 66 ntBASIC1.19□□□□□ -2.22
CENPAP49450 AC131055.1-201ENST00000584626 316 ntBASIC1.19□□□□□ -2.22
CENPAP49450 AL512598.1-201ENST00000610158 273 ntBASIC1.19□□□□□ -2.22
CENPAP49450 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.19□□□□□ -2.22
CENPAP49450 Y_RNA.52-201ENST00000362760 96 ntBASIC1.18□□□□□ -2.22
CENPAP49450 Y_RNA.180-201ENST00000363867 113 ntBASIC1.18□□□□□ -2.22
CENPAP49450 RNU6-396P-201ENST00000365369 105 ntBASIC1.18□□□□□ -2.22
CENPAP49450 Y_RNA.363-201ENST00000365529 113 ntBASIC1.18□□□□□ -2.22
CENPAP49450 RNU6-209P-201ENST00000384118 107 ntBASIC1.18□□□□□ -2.22
CENPAP49450 SNORA80D-201ENST00000384488 135 ntBASIC1.18□□□□□ -2.22
CENPAP49450 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.18□□□□□ -2.22
CENPAP49450 AL591704.2-201ENST00000421658 181 ntBASIC1.18□□□□□ -2.22
CENPAP49450 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.18□□□□□ -2.22
CENPAP49450 AC112693.2-201ENST00000556538 232 ntBASIC1.18□□□□□ -2.22
CENPAP49450 Y_RNA.778-201ENST00000620203 90 ntBASIC1.18□□□□□ -2.22
CENPAP49450 AC091932.4-201ENST00000623386 200 ntBASIC1.18□□□□□ -2.22
CENPAP49450 SNORD18B-201ENST00000365659 72 ntBASIC1.17□□□□□ -2.22
CENPAP49450 Y_RNA.398-201ENST00000383952 99 ntBASIC1.17□□□□□ -2.22
CENPAP49450 Y_RNA.580-201ENST00000391004 95 ntBASIC1.17□□□□□ -2.22
CENPAP49450 SNORA75.2-201ENST00000391138 150 ntBASIC1.17□□□□□ -2.22
CENPAP49450 SNORA75.3-201ENST00000391231 150 ntBASIC1.17□□□□□ -2.22
CENPAP49450 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.17□□□□□ -2.22
CENPAP49450 RNU7-40P-201ENST00000516397 64 ntBASIC1.17□□□□□ -2.22
CENPAP49450 MIR2115-201ENST00000516657 100 ntBASIC1.17□□□□□ -2.22
CENPAP49450 AP003716.2-201ENST00000528260 108 ntBASIC1.17□□□□□ -2.22
CENPAP49450 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.17□□□□□ -2.22
CENPAP49450 SNORA1.1-201ENST00000364671 133 ntBASIC1.16□□□□□ -2.22
CENPAP49450 Y_RNA.497-201ENST00000384447 98 ntBASIC1.16□□□□□ -2.22
CENPAP49450 Y_RNA.584-201ENST00000391090 114 ntBASIC1.16□□□□□ -2.22
CENPAP49450 MIR1287-201ENST00000408492 90 ntBASIC1.16□□□□□ -2.22
CENPAP49450 MRPL35P3-201ENST00000421557 364 ntBASIC1.16□□□□□ -2.22
CENPAP49450 HMGN1P33-201ENST00000432945 451 ntBASIC1.16□□□□□ -2.22
CENPAP49450 RNU1-123P-201ENST00000458950 160 ntBASIC1.16□□□□□ -2.22
CENPAP49450 RNU7-95P-201ENST00000459222 64 ntBASIC1.16□□□□□ -2.22
CENPAP49450 TRMT112P2-201ENST00000512910 132 ntBASIC1.16□□□□□ -2.22
CENPAP49450 SNORD79.1-201ENST00000516069 84 ntBASIC1.16□□□□□ -2.22
CENPAP49450 RN7SKP179-201ENST00000516126 217 ntBASIC1.16□□□□□ -2.22
CENPAP49450 SCARNA15-202ENST00000516881 127 ntBASIC1.16□□□□□ -2.22
CENPAP49450 RNU11-2P-201ENST00000516898 142 ntBASIC1.16□□□□□ -2.22
CENPAP49450 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.16□□□□□ -2.22
CENPAP49450 SEPT14P17-201ENST00000617978 177 ntBASIC1.16□□□□□ -2.22
CENPAP49450 AC021753.1-201ENST00000635724 168 ntBASIC1.16□□□□□ -2.22
CENPAP49450 AC008163.1-202ENST00000636004 2889 ntBASIC1.15□□□□□ -2.22
CENPAP49450 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.15□□□□□ -2.23
CENPAP49450 MT-TR-201ENST00000387439 65 ntBASIC1.15□□□□□ -2.23
CENPAP49450 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
CENPAP49450 MIR513C-201ENST00000401352 84 ntBASIC1.15□□□□□ -2.23
CENPAP49450 MIR1302-7-201ENST00000408841 72 ntBASIC1.15□□□□□ -2.23
CENPAP49450 RNU6-1190P-201ENST00000410811 104 ntBASIC1.15□□□□□ -2.23
CENPAP49450 AL392103.1-201ENST00000447000 198 ntBASIC1.15□□□□□ -2.23
CENPAP49450 RNU7-45P-201ENST00000459460 63 ntBASIC1.15□□□□□ -2.23
CENPAP49450 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.15□□□□□ -2.23
CENPAP49450 AL020996.3-201ENST00000606617 222 ntBASIC1.15□□□□□ -2.23
CENPAP49450 AC012676.2-201ENST00000619258 186 ntBASIC1.15□□□□□ -2.23
CENPAP49450 MIR6516-201ENST00000630554 81 ntBASIC1.15□□□□□ -2.23
CENPAP49450 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
CENPAP49450 Y_RNA.464-201ENST00000384282 110 ntBASIC1.14□□□□□ -2.23
CENPAP49450 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.14□□□□□ -2.23
CENPAP49450 RNA5SP261-201ENST00000410536 106 ntBASIC1.14□□□□□ -2.23
CENPAP49450 AC090844.1-201ENST00000422019 156 ntBASIC1.14□□□□□ -2.23
CENPAP49450 MTATP6P21-201ENST00000440681 189 ntBASIC1.14□□□□□ -2.23
CENPAP49450 RNU7-90P-201ENST00000459216 62 ntBASIC1.14□□□□□ -2.23
CENPAP49450 RNU7-21P-201ENST00000459430 62 ntBASIC1.14□□□□□ -2.23
CENPAP49450 RNA5SP404-201ENST00000517118 132 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 252.9 ms