Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 MIR3128-201ENST00000581957 66 ntBASIC0.86□□□□□ -2.27
NEDD4P46934 MIR4661-201ENST00000582720 75 ntBASIC0.86□□□□□ -2.27
NEDD4P46934 AC131055.1-201ENST00000584626 316 ntBASIC0.86□□□□□ -2.27
NEDD4P46934 AP000942.4-201ENST00000604811 241 ntBASIC0.86□□□□□ -2.27
NEDD4P46934 MIR6516-201ENST00000630554 81 ntBASIC0.86□□□□□ -2.27
NEDD4P46934 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
NEDD4P46934 Y_RNA.7-201ENST00000362352 102 ntBASIC0.85□□□□□ -2.27
NEDD4P46934 Y_RNA.144-201ENST00000363521 113 ntBASIC0.85□□□□□ -2.27
NEDD4P46934 Y_RNA.447-201ENST00000384184 113 ntBASIC0.85□□□□□ -2.27
NEDD4P46934 MIR146A-201ENST00000385201 99 ntBASIC0.85□□□□□ -2.27
NEDD4P46934 SNORD111-201ENST00000408139 94 ntBASIC0.85□□□□□ -2.27
NEDD4P46934 RNU6-613P-201ENST00000410412 108 ntBASIC0.85□□□□□ -2.27
NEDD4P46934 FABP5P4-201ENST00000437203 171 ntBASIC0.85□□□□□ -2.27
NEDD4P46934 RNU7-73P-201ENST00000458743 63 ntBASIC0.85□□□□□ -2.27
NEDD4P46934 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.85□□□□□ -2.27
NEDD4P46934 RNU7-53P-201ENST00000516705 60 ntBASIC0.85□□□□□ -2.27
NEDD4P46934 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.85□□□□□ -2.27
NEDD4P46934 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
NEDD4P46934 SNORD113.3-201ENST00000364630 78 ntBASIC0.84□□□□□ -2.28
NEDD4P46934 RNU6-1189P-201ENST00000383958 107 ntBASIC0.84□□□□□ -2.28
NEDD4P46934 Y_RNA.494-201ENST00000384432 111 ntBASIC0.84□□□□□ -2.28
NEDD4P46934 Y_RNA.542-201ENST00000384641 111 ntBASIC0.84□□□□□ -2.28
NEDD4P46934 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.84□□□□□ -2.28
NEDD4P46934 Y_RNA.626-201ENST00000411288 95 ntBASIC0.84□□□□□ -2.28
NEDD4P46934 AF228730.3-201ENST00000436691 102 ntBASIC0.84□□□□□ -2.28
NEDD4P46934 SNORD124-201ENST00000459577 104 ntBASIC0.84□□□□□ -2.28
NEDD4P46934 SNORA18.4-201ENST00000516440 124 ntBASIC0.84□□□□□ -2.28
NEDD4P46934 RNU6-958P-201ENST00000516995 106 ntBASIC0.84□□□□□ -2.28
NEDD4P46934 MIR4714-201ENST00000580728 77 ntBASIC0.84□□□□□ -2.28
NEDD4P46934 AC106800.4-201ENST00000614905 153 ntBASIC0.84□□□□□ -2.28
NEDD4P46934 MIR6866-201ENST00000638146 69 ntBASIC0.84□□□□□ -2.28
NEDD4P46934 Y_RNA.308-201ENST00000365043 101 ntBASIC0.83□□□□□ -2.28
NEDD4P46934 RNU6-1292P-201ENST00000383856 107 ntBASIC0.83□□□□□ -2.28
NEDD4P46934 MT-TN-201ENST00000387400 73 ntBASIC0.83□□□□□ -2.28
NEDD4P46934 RNU6-578P-201ENST00000390980 103 ntBASIC0.83□□□□□ -2.28
NEDD4P46934 AL121914.1-201ENST00000450188 156 ntBASIC0.83□□□□□ -2.28
NEDD4P46934 RNU7-96P-201ENST00000459535 64 ntBASIC0.83□□□□□ -2.28
NEDD4P46934 RPS29P24-201ENST00000486345 171 ntBASIC0.83□□□□□ -2.28
NEDD4P46934 RNA5SP436-201ENST00000516020 115 ntBASIC0.83□□□□□ -2.28
NEDD4P46934 SNORD36C-201ENST00000516733 66 ntBASIC0.83□□□□□ -2.28
NEDD4P46934 AC036111.3-201ENST00000526389 112 ntBASIC0.83□□□□□ -2.28
NEDD4P46934 MIR6779-201ENST00000617283 64 ntBASIC0.83□□□□□ -2.28
NEDD4P46934 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
NEDD4P46934 Y_RNA.307-201ENST00000365022 117 ntBASIC0.82□□□□□ -2.28
NEDD4P46934 MIR508-201ENST00000384857 115 ntBASIC0.82□□□□□ -2.28
NEDD4P46934 MIR942-201ENST00000401111 86 ntBASIC0.82□□□□□ -2.28
NEDD4P46934 Y_RNA.618-201ENST00000410949 107 ntBASIC0.82□□□□□ -2.28
NEDD4P46934 AL035398.1-201ENST00000430869 322 ntBASIC0.82□□□□□ -2.28
NEDD4P46934 Y_RNA.797-201ENST00000515977 94 ntBASIC0.82□□□□□ -2.28
NEDD4P46934 RNU6-561P-201ENST00000516222 102 ntBASIC0.82□□□□□ -2.28
NEDD4P46934 RNY3P16-201ENST00000516338 101 ntBASIC0.82□□□□□ -2.28
NEDD4P46934 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
NEDD4P46934 MIR377-201ENST00000362145 69 ntBASIC0.81□□□□□ -2.28
NEDD4P46934 Y_RNA.23-201ENST00000362496 106 ntBASIC0.81□□□□□ -2.28
NEDD4P46934 Y_RNA.60-201ENST00000362831 98 ntBASIC0.81□□□□□ -2.28
NEDD4P46934 Y_RNA.168-201ENST00000363740 102 ntBASIC0.81□□□□□ -2.28
NEDD4P46934 Y_RNA.489-201ENST00000384410 101 ntBASIC0.81□□□□□ -2.28
NEDD4P46934 Y_RNA.571-201ENST00000384753 98 ntBASIC0.81□□□□□ -2.28
NEDD4P46934 RNU6-493P-201ENST00000391321 108 ntBASIC0.81□□□□□ -2.28
NEDD4P46934 PDCD5P2-201ENST00000507570 312 ntBASIC0.81□□□□□ -2.28
NEDD4P46934 Y_RNA.680-201ENST00000516441 93 ntBASIC0.81□□□□□ -2.28
NEDD4P46934 RNU6-111P-201ENST00000517179 105 ntBASIC0.81□□□□□ -2.28
NEDD4P46934 AC023827.1-201ENST00000569247 97 ntBASIC0.81□□□□□ -2.28
NEDD4P46934 AP000753.3-201ENST00000604083 169 ntBASIC0.81□□□□□ -2.28
NEDD4P46934 MIR8055-201ENST00000610739 97 ntBASIC0.81□□□□□ -2.28
NEDD4P46934 MIR6835-201ENST00000621552 64 ntBASIC0.81□□□□□ -2.28
NEDD4P46934 Y_RNA.440-201ENST00000384120 114 ntBASIC0.8□□□□□ -2.28
NEDD4P46934 SNORD77.3-201ENST00000391113 65 ntBASIC0.8□□□□□ -2.28
NEDD4P46934 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.8□□□□□ -2.28
NEDD4P46934 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.8□□□□□ -2.28
NEDD4P46934 AC067940.1-201ENST00000458411 300 ntBASIC0.8□□□□□ -2.28
NEDD4P46934 U7.7-201ENST00000459276 60 ntBASIC0.8□□□□□ -2.28
NEDD4P46934 SNORD116-25-201ENST00000516517 92 ntBASIC0.8□□□□□ -2.28
NEDD4P46934 AC004812.1-201ENST00000540773 146 ntBASIC0.8□□□□□ -2.28
NEDD4P46934 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.8□□□□□ -2.28
NEDD4P46934 MIR378D2-201ENST00000580636 98 ntBASIC0.8□□□□□ -2.28
NEDD4P46934 MIR4264-201ENST00000583520 66 ntBASIC0.8□□□□□ -2.28
NEDD4P46934 RNU2-4P-201ENST00000606190 192 ntBASIC0.8□□□□□ -2.28
NEDD4P46934 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
NEDD4P46934 Y_RNA.36-201ENST00000362602 112 ntBASIC0.79□□□□□ -2.28
NEDD4P46934 RNU6-654P-201ENST00000364373 107 ntBASIC0.79□□□□□ -2.28
NEDD4P46934 RNU6-923P-201ENST00000364753 107 ntBASIC0.79□□□□□ -2.28
NEDD4P46934 RNU1-36P-201ENST00000365130 165 ntBASIC0.79□□□□□ -2.28
NEDD4P46934 RNU6-580P-201ENST00000365159 107 ntBASIC0.79□□□□□ -2.28
NEDD4P46934 SNORA1-201ENST00000384107 130 ntBASIC0.79□□□□□ -2.28
NEDD4P46934 RNU6-574P-201ENST00000384265 107 ntBASIC0.79□□□□□ -2.28
NEDD4P46934 RNU4-70P-201ENST00000384579 139 ntBASIC0.79□□□□□ -2.28
NEDD4P46934 POLR2J4-204ENST00000418424 324 ntBASIC0.79□□□□□ -2.28
NEDD4P46934 RNU7-80P-201ENST00000459562 61 ntBASIC0.79□□□□□ -2.28
NEDD4P46934 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.79□□□□□ -2.28
NEDD4P46934 RNU6-998P-201ENST00000515894 101 ntBASIC0.79□□□□□ -2.28
NEDD4P46934 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.79□□□□□ -2.28
NEDD4P46934 AL365205.2-201ENST00000594586 68 ntBASIC0.79□□□□□ -2.28
NEDD4P46934 AL136317.1-201ENST00000612653 226 ntBASIC0.79□□□□□ -2.28
NEDD4P46934 Z97988.1-201ENST00000637697 135 ntBASIC0.79□□□□□ -2.28
NEDD4P46934 Y_RNA.200-201ENST00000364018 102 ntBASIC0.78□□□□□ -2.28
NEDD4P46934 Y_RNA.393-201ENST00000383936 102 ntBASIC0.78□□□□□ -2.28
NEDD4P46934 Y_RNA.401-201ENST00000383965 117 ntBASIC0.78□□□□□ -2.28
NEDD4P46934 Y_RNA.435-201ENST00000384095 112 ntBASIC0.78□□□□□ -2.28
NEDD4P46934 SNORA2B-201ENST00000384583 137 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 180.8 ms