Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-0.57□□□□□ -2.5
RPL28P46779 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.57□□□□□ -2.5
RPL28P46779 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.57□□□□□ -2.5
RPL28P46779 Y_RNA.86-201ENST00000363020 111 ntBASIC-0.57□□□□□ -2.5
RPL28P46779 SNORD115-24-201ENST00000363528 82 ntBASIC-0.57□□□□□ -2.5
RPL28P46779 Y_RNA.383-201ENST00000383855 97 ntBASIC-0.57□□□□□ -2.5
RPL28P46779 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.57□□□□□ -2.5
RPL28P46779 SNORD63-201ENST00000384262 68 ntBASIC-0.57□□□□□ -2.5
RPL28P46779 RNU6-310P-201ENST00000384655 107 ntBASIC-0.57□□□□□ -2.5
RPL28P46779 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.57□□□□□ -2.5
RPL28P46779 AC244250.2-201ENST00000418731 148 ntBASIC-0.57□□□□□ -2.5
RPL28P46779 MTATP6P17-201ENST00000431030 672 ntBASIC-0.57□□□□□ -2.5
RPL28P46779 AF228730.3-201ENST00000436691 102 ntBASIC-0.57□□□□□ -2.5
RPL28P46779 AC010655.3-201ENST00000478818 450 ntBASIC-0.57□□□□□ -2.5
RPL28P46779 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.57□□□□□ -2.5
RPL28P46779 RNU6-126P-201ENST00000516685 103 ntBASIC-0.57□□□□□ -2.5
RPL28P46779 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.57□□□□□ -2.5
RPL28P46779 RNU7-161P-201ENST00000517289 62 ntBASIC-0.57□□□□□ -2.5
RPL28P46779 AC100767.1-201ENST00000528178 123 ntBASIC-0.57□□□□□ -2.5
RPL28P46779 MIR4802-201ENST00000581881 80 ntBASIC-0.57□□□□□ -2.5
RPL28P46779 Y_RNA.772-201ENST00000606692 102 ntBASIC-0.57□□□□□ -2.5
RPL28P46779 FTX_2.1-201ENST00000618816 94 ntBASIC-0.57□□□□□ -2.5
RPL28P46779 Y_RNA.14-201ENST00000362415 103 ntBASIC-0.58□□□□□ -2.5
RPL28P46779 Y_RNA.314-201ENST00000365114 102 ntBASIC-0.58□□□□□ -2.5
RPL28P46779 MIR1912-201ENST00000410389 80 ntBASIC-0.58□□□□□ -2.5
RPL28P46779 RNU4-14P-201ENST00000410858 122 ntBASIC-0.58□□□□□ -2.5
RPL28P46779 RNU6-284P-201ENST00000411105 106 ntBASIC-0.58□□□□□ -2.5
RPL28P46779 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-0.58□□□□□ -2.5
RPL28P46779 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.58□□□□□ -2.5
RPL28P46779 VN1R91P-201ENST00000594377 169 ntBASIC-0.58□□□□□ -2.5
RPL28P46779 AL360085.1-201ENST00000604713 532 ntBASIC-0.58□□□□□ -2.5
RPL28P46779 AL590491.3-201ENST00000610731 82 ntBASIC-0.58□□□□□ -2.5
RPL28P46779 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.58□□□□□ -2.5
RPL28P46779 MIR6507-201ENST00000613630 70 ntBASIC-0.58□□□□□ -2.5
RPL28P46779 AC073869.9-201ENST00000641610 120 ntBASIC-0.58□□□□□ -2.5
RPL28P46779 MIR302B-201ENST00000362188 73 ntBASIC-0.59□□□□□ -2.5
RPL28P46779 MIR342-201ENST00000362212 99 ntBASIC-0.59□□□□□ -2.5
RPL28P46779 MIR101-1-201ENST00000362265 75 ntBASIC-0.59□□□□□ -2.5
RPL28P46779 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.59□□□□□ -2.5
RPL28P46779 SNORD114-11-201ENST00000363738 75 ntBASIC-0.59□□□□□ -2.5
RPL28P46779 RNU6-1188P-201ENST00000363795 107 ntBASIC-0.59□□□□□ -2.5
RPL28P46779 RNA5SP205-201ENST00000364653 136 ntBASIC-0.59□□□□□ -2.5
RPL28P46779 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.59□□□□□ -2.5
RPL28P46779 RNU6-890P-201ENST00000384121 107 ntBASIC-0.59□□□□□ -2.5
RPL28P46779 Y_RNA.453-201ENST00000384223 109 ntBASIC-0.59□□□□□ -2.5
RPL28P46779 RNU6-21P-201ENST00000384710 107 ntBASIC-0.59□□□□□ -2.5
RPL28P46779 SNORA32.3-201ENST00000384772 121 ntBASIC-0.59□□□□□ -2.5
RPL28P46779 AC096644.2-201ENST00000429278 159 ntBASIC-0.59□□□□□ -2.5
RPL28P46779 AC244505.6-201ENST00000452829 130 ntBASIC-0.59□□□□□ -2.5
RPL28P46779 RNU6-191P-201ENST00000516295 94 ntBASIC-0.59□□□□□ -2.5
RPL28P46779 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.59□□□□□ -2.5
RPL28P46779 RNU6-365P-201ENST00000517113 106 ntBASIC-0.59□□□□□ -2.5
RPL28P46779 AP003733.2-201ENST00000529409 171 ntBASIC-0.59□□□□□ -2.5
RPL28P46779 MIR4263-201ENST00000584745 83 ntBASIC-0.59□□□□□ -2.5
RPL28P46779 AC048344.4-201ENST00000619744 527 ntBASIC-0.59□□□□□ -2.5
RPL28P46779 uc_338.36-201ENST00000622331 158 ntBASIC-0.59□□□□□ -2.5
RPL28P46779 MIR3688-2-201ENST00000636963 87 ntBASIC-0.59□□□□□ -2.5
RPL28P46779 RNU6-702P-201ENST00000364982 107 ntBASIC-0.6□□□□□ -2.51
RPL28P46779 RNU6-763P-201ENST00000390865 106 ntBASIC-0.6□□□□□ -2.51
RPL28P46779 SNORD41.1-201ENST00000391000 69 ntBASIC-0.6□□□□□ -2.51
RPL28P46779 MIR548L-201ENST00000408303 86 ntBASIC-0.6□□□□□ -2.51
RPL28P46779 AC099799.1-201ENST00000439809 192 ntBASIC-0.6□□□□□ -2.51
RPL28P46779 MTCO2P24-201ENST00000515611 426 ntBASIC-0.6□□□□□ -2.51
RPL28P46779 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-0.6□□□□□ -2.51
RPL28P46779 AC103591.3-201ENST00000608684 209 ntBASIC-0.6□□□□□ -2.51
RPL28P46779 MIR548AZ-201ENST00000616567 95 ntBASIC-0.6□□□□□ -2.51
RPL28P46779 Y_RNA.66-201ENST00000362862 102 ntBASIC-0.61□□□□□ -2.51
RPL28P46779 Y_RNA.194-201ENST00000363985 102 ntBASIC-0.61□□□□□ -2.51
RPL28P46779 RNY1P13-201ENST00000365030 105 ntBASIC-0.61□□□□□ -2.51
RPL28P46779 Y_RNA.458-201ENST00000384240 102 ntBASIC-0.61□□□□□ -2.51
RPL28P46779 RNA5SP451-201ENST00000410588 110 ntBASIC-0.61□□□□□ -2.51
RPL28P46779 AC024909.2-201ENST00000553035 286 ntBASIC-0.61□□□□□ -2.51
RPL28P46779 MIR4493-201ENST00000584016 73 ntBASIC-0.61□□□□□ -2.51
RPL28P46779 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-0.61□□□□□ -2.51
RPL28P46779 AC013791.1-201ENST00000616619 62 ntBASIC-0.61□□□□□ -2.51
RPL28P46779 AC084368.1-201ENST00000620935 65 ntBASIC-0.61□□□□□ -2.51
RPL28P46779 MIR6841-201ENST00000637129 72 ntBASIC-0.61□□□□□ -2.51
RPL28P46779 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.61□□□□□ -2.51
RPL28P46779 MIR101-2-201ENST00000362195 79 ntBASIC-0.62□□□□□ -2.51
RPL28P46779 RNA5SP403-201ENST00000363598 108 ntBASIC-0.62□□□□□ -2.51
RPL28P46779 RNY3-201ENST00000365484 102 ntBASIC-0.62□□□□□ -2.51
RPL28P46779 RNU6-937P-201ENST00000384325 106 ntBASIC-0.62□□□□□ -2.51
RPL28P46779 RNU6-370P-201ENST00000411008 104 ntBASIC-0.62□□□□□ -2.51
RPL28P46779 Y_RNA.635-201ENST00000459041 101 ntBASIC-0.62□□□□□ -2.51
RPL28P46779 AC114755.3-201ENST00000481111 251 ntBASIC-0.62□□□□□ -2.51
RPL28P46779 Y_RNA.655-201ENST00000515919 96 ntBASIC-0.62□□□□□ -2.51
RPL28P46779 RNU6-397P-201ENST00000516226 104 ntBASIC-0.62□□□□□ -2.51
RPL28P46779 RNU6-531P-201ENST00000516694 104 ntBASIC-0.62□□□□□ -2.51
RPL28P46779 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-0.62□□□□□ -2.51
RPL28P46779 MIR4724-201ENST00000579485 89 ntBASIC-0.62□□□□□ -2.51
RPL28P46779 MIR4432-201ENST00000581823 84 ntBASIC-0.62□□□□□ -2.51
RPL28P46779 MIR4636-201ENST00000582271 80 ntBASIC-0.62□□□□□ -2.51
RPL28P46779 AL121655.1-201ENST00000605811 308 ntBASIC-0.62□□□□□ -2.51
RPL28P46779 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.62□□□□□ -2.51
RPL28P46779 MIR367-201ENST00000362299 68 ntBASIC-0.63□□□□□ -2.51
RPL28P46779 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.63□□□□□ -2.51
RPL28P46779 BX276092.1-201ENST00000427368 251 ntBASIC-0.63□□□□□ -2.51
RPL28P46779 MTND1P34-201ENST00000438556 671 ntBASIC-0.63□□□□□ -2.51
RPL28P46779 RNU7-104P-201ENST00000459398 79 ntBASIC-0.63□□□□□ -2.51
RPL28P46779 Y_RNA.691-201ENST00000516611 103 ntBASIC-0.63□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms