Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.02□□□□□ -2.25
NKX2-1P43699 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.02□□□□□ -2.25
NKX2-1P43699 RNU1-92P-201ENST00000517017 135 ntBASIC1.02□□□□□ -2.25
NKX2-1P43699 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.02□□□□□ -2.25
NKX2-1P43699 DNAJC19P9-201ENST00000555084 351 ntBASIC1.02□□□□□ -2.25
NKX2-1P43699 AC131055.1-201ENST00000584626 316 ntBASIC1.02□□□□□ -2.25
NKX2-1P43699 AL512598.1-201ENST00000610158 273 ntBASIC1.02□□□□□ -2.25
NKX2-1P43699 MIR6844-201ENST00000637122 62 ntBASIC1.02□□□□□ -2.25
NKX2-1P43699 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
NKX2-1P43699 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
NKX2-1P43699 RNA5SP432-201ENST00000362480 116 ntBASIC1.01□□□□□ -2.25
NKX2-1P43699 RNA5SP99-201ENST00000364020 114 ntBASIC1.01□□□□□ -2.25
NKX2-1P43699 Y_RNA.251-201ENST00000364551 99 ntBASIC1.01□□□□□ -2.25
NKX2-1P43699 RNU6-613P-201ENST00000410412 108 ntBASIC1.01□□□□□ -2.25
NKX2-1P43699 AC009474.2-201ENST00000451383 136 ntBASIC1.01□□□□□ -2.25
NKX2-1P43699 RNU7-21P-201ENST00000459430 62 ntBASIC1.01□□□□□ -2.25
NKX2-1P43699 AC074198.2-201ENST00000508153 258 ntBASIC1.01□□□□□ -2.25
NKX2-1P43699 RNA5SP236-201ENST00000516169 116 ntBASIC1.01□□□□□ -2.25
NKX2-1P43699 RNU7-40P-201ENST00000516397 64 ntBASIC1.01□□□□□ -2.25
NKX2-1P43699 SEPT14P17-201ENST00000617978 177 ntBASIC1.01□□□□□ -2.25
NKX2-1P43699 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1□□□□□ -2.25
NKX2-1P43699 MIR377-201ENST00000362145 69 ntBASIC1□□□□□ -2.25
NKX2-1P43699 Y_RNA.351-201ENST00000365436 96 ntBASIC1□□□□□ -2.25
NKX2-1P43699 MIR1285-1-201ENST00000408593 84 ntBASIC1□□□□□ -2.25
NKX2-1P43699 RNA5SP261-201ENST00000410536 106 ntBASIC1□□□□□ -2.25
NKX2-1P43699 AC063976.4-201ENST00000421971 163 ntBASIC1□□□□□ -2.25
NKX2-1P43699 MIR3144-201ENST00000579460 79 ntBASIC1□□□□□ -2.25
NKX2-1P43699 AL020996.3-201ENST00000606617 222 ntBASIC1□□□□□ -2.25
NKX2-1P43699 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1□□□□□ -2.25
NKX2-1P43699 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1□□□□□ -2.25
NKX2-1P43699 AL391516.1-201ENST00000554380 2449 ntBASIC0.99□□□□□ -2.25
NKX2-1P43699 MIR337-201ENST00000362281 93 ntBASIC0.99□□□□□ -2.25
NKX2-1P43699 RNU6-1082P-201ENST00000364574 107 ntBASIC0.99□□□□□ -2.25
NKX2-1P43699 RNU6-818P-201ENST00000364837 108 ntBASIC0.99□□□□□ -2.25
NKX2-1P43699 RNU6-396P-201ENST00000365369 105 ntBASIC0.99□□□□□ -2.25
NKX2-1P43699 RNU6-449P-201ENST00000383914 107 ntBASIC0.99□□□□□ -2.25
NKX2-1P43699 Y_RNA.497-201ENST00000384447 98 ntBASIC0.99□□□□□ -2.25
NKX2-1P43699 MIR200A-201ENST00000384875 90 ntBASIC0.99□□□□□ -2.25
NKX2-1P43699 RNU6-1319P-201ENST00000390855 104 ntBASIC0.99□□□□□ -2.25
NKX2-1P43699 RNU6-747P-201ENST00000390928 104 ntBASIC0.99□□□□□ -2.25
NKX2-1P43699 RNU6-241P-201ENST00000391148 104 ntBASIC0.99□□□□□ -2.25
NKX2-1P43699 SNORA26.6-201ENST00000391256 115 ntBASIC0.99□□□□□ -2.25
NKX2-1P43699 RNU6-177P-201ENST00000411257 104 ntBASIC0.99□□□□□ -2.25
NKX2-1P43699 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.99□□□□□ -2.25
NKX2-1P43699 RNU7-197P-201ENST00000458836 62 ntBASIC0.99□□□□□ -2.25
NKX2-1P43699 RNU7-67P-201ENST00000459003 62 ntBASIC0.99□□□□□ -2.25
NKX2-1P43699 RNU7-90P-201ENST00000459216 62 ntBASIC0.99□□□□□ -2.25
NKX2-1P43699 RNU6-113P-201ENST00000516653 101 ntBASIC0.99□□□□□ -2.25
NKX2-1P43699 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.99□□□□□ -2.25
NKX2-1P43699 MIR548AO-201ENST00000579992 96 ntBASIC0.99□□□□□ -2.25
NKX2-1P43699 AC011603.4-201ENST00000611325 277 ntBASIC0.99□□□□□ -2.25
NKX2-1P43699 Y_RNA.778-201ENST00000620203 90 ntBASIC0.99□□□□□ -2.25
NKX2-1P43699 Y_RNA.120-201ENST00000363304 110 ntBASIC0.98□□□□□ -2.25
NKX2-1P43699 Y_RNA.150-201ENST00000363562 102 ntBASIC0.98□□□□□ -2.25
NKX2-1P43699 RNY1P5-201ENST00000383890 115 ntBASIC0.98□□□□□ -2.25
NKX2-1P43699 RNU4-62P-201ENST00000410125 130 ntBASIC0.98□□□□□ -2.25
NKX2-1P43699 AC002429.1-201ENST00000437672 148 ntBASIC0.98□□□□□ -2.25
NKX2-1P43699 OR2A41P-201ENST00000473586 105 ntBASIC0.98□□□□□ -2.25
NKX2-1P43699 AC108729.3-201ENST00000513484 108 ntBASIC0.98□□□□□ -2.25
NKX2-1P43699 MIR2115-201ENST00000516657 100 ntBASIC0.98□□□□□ -2.25
NKX2-1P43699 RNU6-958P-201ENST00000516995 106 ntBASIC0.98□□□□□ -2.25
NKX2-1P43699 HSPE1P19-201ENST00000603327 295 ntBASIC0.98□□□□□ -2.25
NKX2-1P43699 AC012676.2-201ENST00000619258 186 ntBASIC0.98□□□□□ -2.25
NKX2-1P43699 AC091932.4-201ENST00000623386 200 ntBASIC0.98□□□□□ -2.25
NKX2-1P43699 MIR103A2-201ENST00000362154 78 ntBASIC0.97□□□□□ -2.25
NKX2-1P43699 Y_RNA.52-201ENST00000362760 96 ntBASIC0.97□□□□□ -2.25
NKX2-1P43699 Y_RNA.140-201ENST00000363474 103 ntBASIC0.97□□□□□ -2.25
NKX2-1P43699 RNU6-913P-201ENST00000390913 95 ntBASIC0.97□□□□□ -2.25
NKX2-1P43699 SNORA40.6-201ENST00000391153 128 ntBASIC0.97□□□□□ -2.25
NKX2-1P43699 AC108667.1-201ENST00000428618 249 ntBASIC0.97□□□□□ -2.25
NKX2-1P43699 MTATP6P21-201ENST00000440681 189 ntBASIC0.97□□□□□ -2.25
NKX2-1P43699 RNU6-893P-201ENST00000458841 100 ntBASIC0.97□□□□□ -2.25
NKX2-1P43699 AC004223.1-201ENST00000479840 271 ntBASIC0.97□□□□□ -2.25
NKX2-1P43699 Y_RNA.676-201ENST00000516393 96 ntBASIC0.97□□□□□ -2.25
NKX2-1P43699 MIR4421-201ENST00000578133 69 ntBASIC0.97□□□□□ -2.25
NKX2-1P43699 MIR3152-201ENST00000579801 74 ntBASIC0.97□□□□□ -2.25
NKX2-1P43699 AP001340.1-201ENST00000624405 217 ntBASIC0.97□□□□□ -2.25
NKX2-1P43699 Y_RNA.354-201ENST00000365448 111 ntBASIC0.96□□□□□ -2.26
NKX2-1P43699 Y_RNA.400-201ENST00000383963 111 ntBASIC0.96□□□□□ -2.26
NKX2-1P43699 MIR570-201ENST00000384917 97 ntBASIC0.96□□□□□ -2.26
NKX2-1P43699 AL603914.1-201ENST00000401964 204 ntBASIC0.96□□□□□ -2.26
NKX2-1P43699 RPS29P28-201ENST00000446439 141 ntBASIC0.96□□□□□ -2.26
NKX2-1P43699 RNU2-11P-201ENST00000459191 187 ntBASIC0.96□□□□□ -2.26
NKX2-1P43699 RNU6-1149P-201ENST00000516810 97 ntBASIC0.96□□□□□ -2.26
NKX2-1P43699 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.96□□□□□ -2.26
NKX2-1P43699 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.96□□□□□ -2.26
NKX2-1P43699 MIR4264-201ENST00000583520 66 ntBASIC0.96□□□□□ -2.26
NKX2-1P43699 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.96□□□□□ -2.26
NKX2-1P43699 MIR6516-201ENST00000630554 81 ntBASIC0.96□□□□□ -2.26
NKX2-1P43699 MTND5P32-201ENST00000560711 1802 ntBASIC0.96□□□□□ -2.26
NKX2-1P43699 RNU6-349P-201ENST00000362402 107 ntBASIC0.95□□□□□ -2.26
NKX2-1P43699 Y_RNA.168-201ENST00000363740 102 ntBASIC0.95□□□□□ -2.26
NKX2-1P43699 SNORD114-24-201ENST00000365029 72 ntBASIC0.95□□□□□ -2.26
NKX2-1P43699 Y_RNA.338-201ENST00000365320 114 ntBASIC0.95□□□□□ -2.26
NKX2-1P43699 SNORA75.2-201ENST00000391138 150 ntBASIC0.95□□□□□ -2.26
NKX2-1P43699 SNORA75.3-201ENST00000391231 150 ntBASIC0.95□□□□□ -2.26
NKX2-1P43699 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.95□□□□□ -2.26
NKX2-1P43699 RNU6-588P-201ENST00000410281 105 ntBASIC0.95□□□□□ -2.26
NKX2-1P43699 AC112693.2-201ENST00000556538 232 ntBASIC0.95□□□□□ -2.26
NKX2-1P43699 MIR3660-201ENST00000584845 100 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms