Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 Y_RNA.662-201ENST00000516028 97 ntBASIC1.09□□□□□ -2.23
MTHFRP42898 RNU7-43P-201ENST00000516554 64 ntBASIC1.09□□□□□ -2.23
MTHFRP42898 RNU7-121P-201ENST00000516604 62 ntBASIC1.09□□□□□ -2.23
MTHFRP42898 RNU6-126P-201ENST00000516685 103 ntBASIC1.09□□□□□ -2.23
MTHFRP42898 RNU6-365P-201ENST00000517113 106 ntBASIC1.09□□□□□ -2.23
MTHFRP42898 RNU6-1270P-201ENST00000517128 108 ntBASIC1.09□□□□□ -2.23
MTHFRP42898 MIR378D2-201ENST00000580636 98 ntBASIC1.09□□□□□ -2.23
MTHFRP42898 MIR6857-201ENST00000613267 93 ntBASIC1.09□□□□□ -2.23
MTHFRP42898 AC015726.2-201ENST00000620112 122 ntBASIC1.09□□□□□ -2.23
MTHFRP42898 MIR376A2-201ENST00000636782 80 ntBASIC1.09□□□□□ -2.23
MTHFRP42898 MIR373-201ENST00000362273 69 ntBASIC1.08□□□□□ -2.24
MTHFRP42898 SNORA22-201ENST00000383907 134 ntBASIC1.08□□□□□ -2.24
MTHFRP42898 SNORA22C-201ENST00000384614 134 ntBASIC1.08□□□□□ -2.24
MTHFRP42898 SNORD28B-201ENST00000390993 75 ntBASIC1.08□□□□□ -2.24
MTHFRP42898 SNORA75.2-201ENST00000391138 150 ntBASIC1.08□□□□□ -2.24
MTHFRP42898 SNORA75.3-201ENST00000391231 150 ntBASIC1.08□□□□□ -2.24
MTHFRP42898 SNORA26-201ENST00000391286 122 ntBASIC1.08□□□□□ -2.24
MTHFRP42898 RPS26P48-201ENST00000491713 339 ntBASIC1.08□□□□□ -2.24
MTHFRP42898 RNU6-693P-201ENST00000516134 107 ntBASIC1.08□□□□□ -2.24
MTHFRP42898 RNU6-504P-201ENST00000516568 104 ntBASIC1.08□□□□□ -2.24
MTHFRP42898 PRELID3BP2-201ENST00000605362 201 ntBASIC1.08□□□□□ -2.24
MTHFRP42898 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
MTHFRP42898 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.08□□□□□ -2.24
MTHFRP42898 Y_RNA.205-201ENST00000364128 113 ntBASIC1.07□□□□□ -2.24
MTHFRP42898 Y_RNA.270-201ENST00000364693 104 ntBASIC1.07□□□□□ -2.24
MTHFRP42898 Y_RNA.272-201ENST00000364696 102 ntBASIC1.07□□□□□ -2.24
MTHFRP42898 SNORA80D-201ENST00000384488 135 ntBASIC1.07□□□□□ -2.24
MTHFRP42898 RNU6-768P-201ENST00000384683 107 ntBASIC1.07□□□□□ -2.24
MTHFRP42898 SNORD77.3-201ENST00000391113 65 ntBASIC1.07□□□□□ -2.24
MTHFRP42898 AC006461.1-201ENST00000412637 326 ntBASIC1.07□□□□□ -2.24
MTHFRP42898 AC063976.4-201ENST00000421971 163 ntBASIC1.07□□□□□ -2.24
MTHFRP42898 AF228730.3-201ENST00000436691 102 ntBASIC1.07□□□□□ -2.24
MTHFRP42898 AC002429.1-201ENST00000437672 148 ntBASIC1.07□□□□□ -2.24
MTHFRP42898 RNU6-1212P-201ENST00000517023 104 ntBASIC1.07□□□□□ -2.24
MTHFRP42898 MIR548AR-201ENST00000582191 57 ntBASIC1.07□□□□□ -2.24
MTHFRP42898 MIR4661-201ENST00000582720 75 ntBASIC1.07□□□□□ -2.24
MTHFRP42898 AL365205.2-201ENST00000594586 68 ntBASIC1.07□□□□□ -2.24
MTHFRP42898 SNORD114-21-201ENST00000606412 72 ntBASIC1.07□□□□□ -2.24
MTHFRP42898 AC008163.1-202ENST00000636004 2889 ntBASIC1.06□□□□□ -2.24
MTHFRP42898 MIR103A2-201ENST00000362154 78 ntBASIC1.06□□□□□ -2.24
MTHFRP42898 Y_RNA.37-201ENST00000362606 108 ntBASIC1.06□□□□□ -2.24
MTHFRP42898 RNY1P11-201ENST00000363759 113 ntBASIC1.06□□□□□ -2.24
MTHFRP42898 RNU6-1130P-201ENST00000365434 107 ntBASIC1.06□□□□□ -2.24
MTHFRP42898 RNU6-597P-201ENST00000365620 102 ntBASIC1.06□□□□□ -2.24
MTHFRP42898 RNU6-1336P-201ENST00000383886 109 ntBASIC1.06□□□□□ -2.24
MTHFRP42898 MIR532-201ENST00000385025 91 ntBASIC1.06□□□□□ -2.24
MTHFRP42898 RNU6-239P-201ENST00000390990 99 ntBASIC1.06□□□□□ -2.24
MTHFRP42898 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.06□□□□□ -2.24
MTHFRP42898 RPS29P28-201ENST00000446439 141 ntBASIC1.06□□□□□ -2.24
MTHFRP42898 AC107027.2-201ENST00000512197 115 ntBASIC1.06□□□□□ -2.24
MTHFRP42898 RNU2-13P-201ENST00000515909 113 ntBASIC1.06□□□□□ -2.24
MTHFRP42898 RNA5SP436-201ENST00000516020 115 ntBASIC1.06□□□□□ -2.24
MTHFRP42898 CYP3A137P-201ENST00000562436 69 ntBASIC1.06□□□□□ -2.24
MTHFRP42898 MIR3658-201ENST00000636291 56 ntBASIC1.06□□□□□ -2.24
MTHFRP42898 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
MTHFRP42898 RNA5SP264-201ENST00000363115 107 ntBASIC1.05□□□□□ -2.24
MTHFRP42898 SNORD115-28-201ENST00000363931 81 ntBASIC1.05□□□□□ -2.24
MTHFRP42898 RNU6-818P-201ENST00000364837 108 ntBASIC1.05□□□□□ -2.24
MTHFRP42898 RNU6-209P-201ENST00000384118 107 ntBASIC1.05□□□□□ -2.24
MTHFRP42898 Y_RNA.464-201ENST00000384282 110 ntBASIC1.05□□□□□ -2.24
MTHFRP42898 RNU6-804P-201ENST00000384286 107 ntBASIC1.05□□□□□ -2.24
MTHFRP42898 Y_RNA.494-201ENST00000384432 111 ntBASIC1.05□□□□□ -2.24
MTHFRP42898 MIR570-201ENST00000384917 97 ntBASIC1.05□□□□□ -2.24
MTHFRP42898 Y_RNA.580-201ENST00000391004 95 ntBASIC1.05□□□□□ -2.24
MTHFRP42898 U8.17-201ENST00000391292 132 ntBASIC1.05□□□□□ -2.24
MTHFRP42898 SNORA79-201ENST00000408376 140 ntBASIC1.05□□□□□ -2.24
MTHFRP42898 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.05□□□□□ -2.24
MTHFRP42898 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.05□□□□□ -2.24
MTHFRP42898 SNORD116-25-201ENST00000516517 92 ntBASIC1.05□□□□□ -2.24
MTHFRP42898 SNORD36C-201ENST00000516733 66 ntBASIC1.05□□□□□ -2.24
MTHFRP42898 RNU7-181P-201ENST00000517234 74 ntBASIC1.05□□□□□ -2.24
MTHFRP42898 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.05□□□□□ -2.24
MTHFRP42898 MIR3144-201ENST00000579460 79 ntBASIC1.05□□□□□ -2.24
MTHFRP42898 AC104465.1-201ENST00000611365 139 ntBASIC1.05□□□□□ -2.24
MTHFRP42898 AC008133.2-201ENST00000624540 351 ntBASIC1.05□□□□□ -2.24
MTHFRP42898 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.05□□□□□ -2.24
MTHFRP42898 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
MTHFRP42898 RNA5SP48-201ENST00000363969 126 ntBASIC1.04□□□□□ -2.24
MTHFRP42898 RNU4-38P-201ENST00000364472 129 ntBASIC1.04□□□□□ -2.24
MTHFRP42898 Y_RNA.542-201ENST00000384641 111 ntBASIC1.04□□□□□ -2.24
MTHFRP42898 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.04□□□□□ -2.24
MTHFRP42898 RNU7-21P-201ENST00000459430 62 ntBASIC1.04□□□□□ -2.24
MTHFRP42898 RNU6-255P-201ENST00000516957 105 ntBASIC1.04□□□□□ -2.24
MTHFRP42898 MTND5P41-201ENST00000517498 206 ntBASIC1.04□□□□□ -2.24
MTHFRP42898 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.04□□□□□ -2.24
MTHFRP42898 MIR3129-201ENST00000581095 76 ntBASIC1.04□□□□□ -2.24
MTHFRP42898 RN7SL793P-201ENST00000583259 296 ntBASIC1.04□□□□□ -2.24
MTHFRP42898 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.04□□□□□ -2.24
MTHFRP42898 AC021753.1-201ENST00000635724 168 ntBASIC1.04□□□□□ -2.24
MTHFRP42898 RNU6-1082P-201ENST00000364574 107 ntBASIC1.03□□□□□ -2.24
MTHFRP42898 RNU6-1187P-201ENST00000364771 110 ntBASIC1.03□□□□□ -2.24
MTHFRP42898 RNU1-133P-201ENST00000364867 167 ntBASIC1.03□□□□□ -2.24
MTHFRP42898 Y_RNA.330-201ENST00000365230 109 ntBASIC1.03□□□□□ -2.24
MTHFRP42898 Y_RNA.337-201ENST00000365312 102 ntBASIC1.03□□□□□ -2.24
MTHFRP42898 RNU6-1292P-201ENST00000383856 107 ntBASIC1.03□□□□□ -2.24
MTHFRP42898 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
MTHFRP42898 MIR1185-1-201ENST00000408598 86 ntBASIC1.03□□□□□ -2.24
MTHFRP42898 POLR2J4-204ENST00000418424 324 ntBASIC1.03□□□□□ -2.24
MTHFRP42898 AC087499.4-201ENST00000448505 178 ntBASIC1.03□□□□□ -2.24
MTHFRP42898 SNORD124-201ENST00000459577 104 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms