Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RNU6-168P-201ENST00000516189 101 ntBASIC-1.38□□□□□ -2.63
HTTP42858 RNU7-149P-201ENST00000516739 59 ntBASIC-1.38□□□□□ -2.63
HTTP42858 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.38□□□□□ -2.63
HTTP42858 AC064836.2-201ENST00000609491 462 ntBASIC-1.38□□□□□ -2.63
HTTP42858 MIR548O2-201ENST00000616090 70 ntBASIC-1.38□□□□□ -2.63
HTTP42858 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.38□□□□□ -2.63
HTTP42858 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.38□□□□□ -2.63
HTTP42858 SNORA51.5-201ENST00000384126 131 ntBASIC-1.38□□□□□ -2.63
HTTP42858 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.38□□□□□ -2.63
HTTP42858 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.38□□□□□ -2.63
HTTP42858 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.38□□□□□ -2.63
HTTP42858 Y_RNA.54-201ENST00000362766 105 ntBASIC-1.39□□□□□ -2.63
HTTP42858 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.39□□□□□ -2.63
HTTP42858 RNU6-387P-201ENST00000411331 105 ntBASIC-1.39□□□□□ -2.63
HTTP42858 SNORD27.1-201ENST00000516319 72 ntBASIC-1.39□□□□□ -2.63
HTTP42858 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.39□□□□□ -2.63
HTTP42858 AL359881.1-201ENST00000602916 267 ntBASIC-1.39□□□□□ -2.63
HTTP42858 RNU6-522P-201ENST00000364497 107 ntBASIC-1.39□□□□□ -2.63
HTTP42858 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.39□□□□□ -2.63
HTTP42858 U6.112-201ENST00000384129 70 ntBASIC-1.39□□□□□ -2.63
HTTP42858 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.39□□□□□ -2.63
HTTP42858 RNU6-400P-201ENST00000391173 106 ntBASIC-1.39□□□□□ -2.63
HTTP42858 RNU6-938P-201ENST00000411285 103 ntBASIC-1.39□□□□□ -2.63
HTTP42858 AP000542.1-201ENST00000448473 371 ntBASIC-1.39□□□□□ -2.63
HTTP42858 MTND1P12-201ENST00000455231 147 ntBASIC-1.39□□□□□ -2.63
HTTP42858 snoU109.3-201ENST00000459477 145 ntBASIC-1.39□□□□□ -2.63
HTTP42858 Y_RNA.331-201ENST00000365267 102 ntBASIC-1.4□□□□□ -2.63
HTTP42858 Y_RNA.408-201ENST00000383987 102 ntBASIC-1.4□□□□□ -2.63
HTTP42858 RNU6-434P-201ENST00000384376 107 ntBASIC-1.4□□□□□ -2.63
HTTP42858 RNU6-601P-201ENST00000384540 107 ntBASIC-1.4□□□□□ -2.63
HTTP42858 MIR487B-201ENST00000385021 84 ntBASIC-1.4□□□□□ -2.63
HTTP42858 MIR2681-201ENST00000581814 105 ntBASIC-1.4□□□□□ -2.63
HTTP42858 RNU6-1189P-201ENST00000383958 107 ntBASIC-1.4□□□□□ -2.63
HTTP42858 Y_RNA.511-201ENST00000384514 103 ntBASIC-1.4□□□□□ -2.63
HTTP42858 MIR1255B2-201ENST00000408618 67 ntBASIC-1.4□□□□□ -2.63
HTTP42858 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-1.4□□□□□ -2.63
HTTP42858 AP001542.1-201ENST00000591314 200 ntBASIC-1.4□□□□□ -2.63
HTTP42858 AC124312.5-201ENST00000604451 268 ntBASIC-1.4□□□□□ -2.63
HTTP42858 5S_rRNA.13-201ENST00000622298 123 ntBASIC-1.4□□□□□ -2.63
HTTP42858 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-1.4□□□□□ -2.63
HTTP42858 TPTE2P1-204ENST00000435256 593 ntBASIC-1.4□□□□□ -2.63
HTTP42858 MTND1P34-201ENST00000438556 671 ntBASIC-1.4□□□□□ -2.63
HTTP42858 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-1.4□□□□□ -2.63
HTTP42858 AC104072.1-201ENST00000568817 668 ntBASIC-1.4□□□□□ -2.63
HTTP42858 AC115989.2-201ENST00000578640 563 ntBASIC-1.4□□□□□ -2.63
HTTP42858 MIR3118-1-201ENST00000581787 76 ntBASIC-1.4□□□□□ -2.63
HTTP42858 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.4□□□□□ -2.63
HTTP42858 RNU6-258P-201ENST00000390884 101 ntBASIC-1.41□□□□□ -2.63
HTTP42858 AP002795.1-201ENST00000534879 84 ntBASIC-1.41□□□□□ -2.63
HTTP42858 AC090617.8-201ENST00000623339 167 ntBASIC-1.41□□□□□ -2.63
HTTP42858 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.41□□□□□ -2.64
HTTP42858 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.41□□□□□ -2.64
HTTP42858 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.41□□□□□ -2.64
HTTP42858 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.41□□□□□ -2.64
HTTP42858 Y_RNA.569-201ENST00000384749 103 ntBASIC-1.41□□□□□ -2.64
HTTP42858 RNU6-803P-201ENST00000516034 102 ntBASIC-1.41□□□□□ -2.64
HTTP42858 U7.5-201ENST00000517224 61 ntBASIC-1.41□□□□□ -2.64
HTTP42858 ZNF92P2-201ENST00000600543 1059 ntBASIC-1.41□□□□□ -2.64
HTTP42858 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-1.41□□□□□ -2.64
HTTP42858 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.41□□□□□ -2.64
HTTP42858 SNORD115-19-201ENST00000363098 82 ntBASIC-1.42□□□□□ -2.64
HTTP42858 RNY4P9-201ENST00000363194 97 ntBASIC-1.42□□□□□ -2.64
HTTP42858 SNORD115-18-201ENST00000363293 82 ntBASIC-1.42□□□□□ -2.64
HTTP42858 Y_RNA.153-201ENST00000363615 91 ntBASIC-1.42□□□□□ -2.64
HTTP42858 SNORD115-17-201ENST00000364612 82 ntBASIC-1.42□□□□□ -2.64
HTTP42858 SNORD115-20-201ENST00000365099 82 ntBASIC-1.42□□□□□ -2.64
HTTP42858 SNORD115-7-201ENST00000365306 82 ntBASIC-1.42□□□□□ -2.64
HTTP42858 RNU6-282P-201ENST00000365357 103 ntBASIC-1.42□□□□□ -2.64
HTTP42858 RNU6-481P-201ENST00000384194 107 ntBASIC-1.42□□□□□ -2.64
HTTP42858 AL031003.1-201ENST00000404229 172 ntBASIC-1.42□□□□□ -2.64
HTTP42858 MIR320C1-201ENST00000408566 88 ntBASIC-1.42□□□□□ -2.64
HTTP42858 Z82188.1-201ENST00000436709 154 ntBASIC-1.42□□□□□ -2.64
HTTP42858 RNU7-195P-201ENST00000458793 62 ntBASIC-1.42□□□□□ -2.64
HTTP42858 MTCO2P29-201ENST00000465212 189 ntBASIC-1.42□□□□□ -2.64
HTTP42858 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-1.42□□□□□ -2.64
HTTP42858 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-1.42□□□□□ -2.64
HTTP42858 MIR410-201ENST00000362222 80 ntBASIC-1.42□□□□□ -2.64
HTTP42858 RNU6-1317P-201ENST00000364582 104 ntBASIC-1.42□□□□□ -2.64
HTTP42858 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.42□□□□□ -2.64
HTTP42858 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.42□□□□□ -2.64
HTTP42858 RNU6-102P-201ENST00000384485 104 ntBASIC-1.42□□□□□ -2.64
HTTP42858 RNU6-456P-201ENST00000384493 107 ntBASIC-1.42□□□□□ -2.64
HTTP42858 MTND3P23-201ENST00000431980 347 ntBASIC-1.42□□□□□ -2.64
HTTP42858 RNU6-893P-201ENST00000458841 100 ntBASIC-1.42□□□□□ -2.64
HTTP42858 AC091144.1-201ENST00000519573 138 ntBASIC-1.42□□□□□ -2.64
HTTP42858 PIGPP4-201ENST00000584447 307 ntBASIC-1.42□□□□□ -2.64
HTTP42858 AC122108.2-201ENST00000611946 526 ntBASIC-1.42□□□□□ -2.64
HTTP42858 AC022140.2-201ENST00000623500 188 ntBASIC-1.42□□□□□ -2.64
HTTP42858 SNORD114-7-201ENST00000362520 77 ntBASIC-1.42□□□□□ -2.64
HTTP42858 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.42□□□□□ -2.64
HTTP42858 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.42□□□□□ -2.64
HTTP42858 Y_RNA.482-201ENST00000384377 111 ntBASIC-1.42□□□□□ -2.64
HTTP42858 RNU6-695P-201ENST00000391157 104 ntBASIC-1.42□□□□□ -2.64
HTTP42858 RNU6-1190P-201ENST00000410811 104 ntBASIC-1.42□□□□□ -2.64
HTTP42858 MTATP6P20-201ENST00000414147 562 ntBASIC-1.42□□□□□ -2.64
HTTP42858 RNU1-54P-201ENST00000517181 120 ntBASIC-1.42□□□□□ -2.64
HTTP42858 AC120024.2-201ENST00000576526 175 ntBASIC-1.42□□□□□ -2.64
HTTP42858 MIR519A2-201ENST00000384990 87 ntBASIC-1.43□□□□□ -2.64
HTTP42858 SNORD73A-201ENST00000386062 65 ntBASIC-1.43□□□□□ -2.64
HTTP42858 RNU6-192P-201ENST00000391253 100 ntBASIC-1.43□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms