Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 RNU1-92P-201ENST00000517017 135 ntBASIC1.25□□□□□ -2.21
RPL3P39023 AP001485.1-201ENST00000604799 199 ntBASIC1.25□□□□□ -2.21
RPL3P39023 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.24□□□□□ -2.21
RPL3P39023 RNU6-309P-201ENST00000364573 106 ntBASIC1.24□□□□□ -2.21
RPL3P39023 Y_RNA.568-201ENST00000384742 113 ntBASIC1.24□□□□□ -2.21
RPL3P39023 RNU6-1067P-201ENST00000384752 107 ntBASIC1.24□□□□□ -2.21
RPL3P39023 MIR1185-1-201ENST00000408598 86 ntBASIC1.24□□□□□ -2.21
RPL3P39023 RNU6-1054P-201ENST00000411293 104 ntBASIC1.24□□□□□ -2.21
RPL3P39023 AC090844.1-201ENST00000422019 156 ntBASIC1.24□□□□□ -2.21
RPL3P39023 HMGN1P33-201ENST00000432945 451 ntBASIC1.24□□□□□ -2.21
RPL3P39023 RPS29P23-201ENST00000458635 123 ntBASIC1.24□□□□□ -2.21
RPL3P39023 RNU7-73P-201ENST00000458743 63 ntBASIC1.24□□□□□ -2.21
RPL3P39023 RNU1-123P-201ENST00000458950 160 ntBASIC1.24□□□□□ -2.21
RPL3P39023 Y_RNA.651-201ENST00000459380 103 ntBASIC1.24□□□□□ -2.21
RPL3P39023 RNU7-45P-201ENST00000459460 63 ntBASIC1.24□□□□□ -2.21
RPL3P39023 MIR4303-201ENST00000581299 66 ntBASIC1.24□□□□□ -2.21
RPL3P39023 HSPE1P19-201ENST00000603327 295 ntBASIC1.24□□□□□ -2.21
RPL3P39023 AL596211.1-201ENST00000569873 2277 ntBASIC1.24□□□□□ -2.21
RPL3P39023 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.24□□□□□ -2.21
RPL3P39023 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.23□□□□□ -2.21
RPL3P39023 Y_RNA.120-201ENST00000363304 110 ntBASIC1.23□□□□□ -2.21
RPL3P39023 RNA5SP99-201ENST00000364020 114 ntBASIC1.23□□□□□ -2.21
RPL3P39023 RNU6-915P-201ENST00000364943 103 ntBASIC1.23□□□□□ -2.21
RPL3P39023 Y_RNA.363-201ENST00000365529 113 ntBASIC1.23□□□□□ -2.21
RPL3P39023 SNORA70.7-201ENST00000384159 133 ntBASIC1.23□□□□□ -2.21
RPL3P39023 MIR548M-201ENST00000408260 86 ntBASIC1.23□□□□□ -2.21
RPL3P39023 AC245047.7-201ENST00000440265 293 ntBASIC1.23□□□□□ -2.21
RPL3P39023 AL392103.1-201ENST00000447000 198 ntBASIC1.23□□□□□ -2.21
RPL3P39023 snoU13.16-201ENST00000459350 104 ntBASIC1.23□□□□□ -2.21
RPL3P39023 AL133373.1-201ENST00000497098 94 ntBASIC1.23□□□□□ -2.21
RPL3P39023 SNORA31.2-201ENST00000516019 134 ntBASIC1.23□□□□□ -2.21
RPL3P39023 AL020996.3-201ENST00000606617 222 ntBASIC1.23□□□□□ -2.21
RPL3P39023 MIR8055-201ENST00000610739 97 ntBASIC1.23□□□□□ -2.21
RPL3P39023 AL353997.5-201ENST00000618886 171 ntBASIC1.23□□□□□ -2.21
RPL3P39023 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
RPL3P39023 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
RPL3P39023 RNU6-349P-201ENST00000362402 107 ntBASIC1.22□□□□□ -2.21
RPL3P39023 SNORA17.3-201ENST00000391159 129 ntBASIC1.22□□□□□ -2.21
RPL3P39023 SNORA26.6-201ENST00000391256 115 ntBASIC1.22□□□□□ -2.21
RPL3P39023 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.22□□□□□ -2.21
RPL3P39023 RNU6-257P-201ENST00000410238 98 ntBASIC1.22□□□□□ -2.21
RPL3P39023 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.22□□□□□ -2.21
RPL3P39023 RNU7-80P-201ENST00000459562 61 ntBASIC1.22□□□□□ -2.21
RPL3P39023 AC104984.5-201ENST00000586878 94 ntBASIC1.22□□□□□ -2.21
RPL3P39023 PRELID3BP2-201ENST00000605362 201 ntBASIC1.22□□□□□ -2.21
RPL3P39023 AC010332.2-201ENST00000613083 1904 ntBASIC1.21□□□□□ -2.22
RPL3P39023 RNA5SP264-201ENST00000363115 107 ntBASIC1.21□□□□□ -2.22
RPL3P39023 RNU1-133P-201ENST00000364867 167 ntBASIC1.21□□□□□ -2.22
RPL3P39023 Y_RNA.294-201ENST00000364916 102 ntBASIC1.21□□□□□ -2.22
RPL3P39023 AL603914.1-201ENST00000401964 204 ntBASIC1.21□□□□□ -2.22
RPL3P39023 AL603908.1-201ENST00000406098 201 ntBASIC1.21□□□□□ -2.22
RPL3P39023 MTND4LP9-201ENST00000427694 174 ntBASIC1.21□□□□□ -2.22
RPL3P39023 Y_RNA.690-201ENST00000516603 95 ntBASIC1.21□□□□□ -2.22
RPL3P39023 RNU7-53P-201ENST00000516705 60 ntBASIC1.21□□□□□ -2.22
RPL3P39023 DNAJC19P9-201ENST00000555084 351 ntBASIC1.21□□□□□ -2.22
RPL3P39023 AC068338.1-201ENST00000565567 176 ntBASIC1.21□□□□□ -2.22
RPL3P39023 AL512598.1-201ENST00000610158 273 ntBASIC1.21□□□□□ -2.22
RPL3P39023 AP001340.1-201ENST00000624405 217 ntBASIC1.21□□□□□ -2.22
RPL3P39023 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
RPL3P39023 RNU4-16P-201ENST00000364737 141 ntBASIC1.2□□□□□ -2.22
RPL3P39023 Y_RNA.343-201ENST00000365354 112 ntBASIC1.2□□□□□ -2.22
RPL3P39023 Y_RNA.454-201ENST00000384224 113 ntBASIC1.2□□□□□ -2.22
RPL3P39023 SNORA40.6-201ENST00000391153 128 ntBASIC1.2□□□□□ -2.22
RPL3P39023 RN7SKP179-201ENST00000516126 217 ntBASIC1.2□□□□□ -2.22
RPL3P39023 RNU7-70P-201ENST00000516941 66 ntBASIC1.2□□□□□ -2.22
RPL3P39023 MIR4524B-201ENST00000581569 115 ntBASIC1.2□□□□□ -2.22
RPL3P39023 MIR3660-201ENST00000584845 100 ntBASIC1.2□□□□□ -2.22
RPL3P39023 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.2□□□□□ -2.22
RPL3P39023 AL022345.2-201ENST00000606307 135 ntBASIC1.2□□□□□ -2.22
RPL3P39023 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
RPL3P39023 MIR103A2-201ENST00000362154 78 ntBASIC1.19□□□□□ -2.22
RPL3P39023 RNY1P6-201ENST00000384193 109 ntBASIC1.19□□□□□ -2.22
RPL3P39023 SNORA75.2-201ENST00000391138 150 ntBASIC1.19□□□□□ -2.22
RPL3P39023 SNORA75.3-201ENST00000391231 150 ntBASIC1.19□□□□□ -2.22
RPL3P39023 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.19□□□□□ -2.22
RPL3P39023 AP001328.1-201ENST00000528550 176 ntBASIC1.19□□□□□ -2.22
RPL3P39023 MIR3121-201ENST00000579680 77 ntBASIC1.19□□□□□ -2.22
RPL3P39023 AC108081.1-201ENST00000604358 221 ntBASIC1.19□□□□□ -2.22
RPL3P39023 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.19□□□□□ -2.22
RPL3P39023 Z97988.1-201ENST00000637697 135 ntBASIC1.19□□□□□ -2.22
RPL3P39023 AL161722.3-201ENST00000605789 2983 ntBASIC1.18□□□□□ -2.22
RPL3P39023 MIR302B-201ENST00000362188 73 ntBASIC1.18□□□□□ -2.22
RPL3P39023 RNA5SP327-201ENST00000362494 101 ntBASIC1.18□□□□□ -2.22
RPL3P39023 Y_RNA.280-201ENST00000364765 112 ntBASIC1.18□□□□□ -2.22
RPL3P39023 SNORD50.2-201ENST00000365465 70 ntBASIC1.18□□□□□ -2.22
RPL3P39023 MIR4421-201ENST00000578133 69 ntBASIC1.18□□□□□ -2.22
RPL3P39023 MIR8065-201ENST00000620577 100 ntBASIC1.18□□□□□ -2.22
RPL3P39023 MIR6717-201ENST00000622747 73 ntBASIC1.18□□□□□ -2.22
RPL3P39023 Y_RNA.140-201ENST00000363474 103 ntBASIC1.17□□□□□ -2.22
RPL3P39023 RNU6-704P-201ENST00000364162 103 ntBASIC1.17□□□□□ -2.22
RPL3P39023 RNU6-654P-201ENST00000364373 107 ntBASIC1.17□□□□□ -2.22
RPL3P39023 SNORD18B-201ENST00000365659 72 ntBASIC1.17□□□□□ -2.22
RPL3P39023 SNORD26-201ENST00000384147 75 ntBASIC1.17□□□□□ -2.22
RPL3P39023 MIR613-201ENST00000385248 95 ntBASIC1.17□□□□□ -2.22
RPL3P39023 RNU6-910P-201ENST00000390844 107 ntBASIC1.17□□□□□ -2.22
RPL3P39023 RNU6-1319P-201ENST00000390855 104 ntBASIC1.17□□□□□ -2.22
RPL3P39023 RNU6-747P-201ENST00000390928 104 ntBASIC1.17□□□□□ -2.22
RPL3P39023 Y_RNA.586-201ENST00000391146 98 ntBASIC1.17□□□□□ -2.22
RPL3P39023 RNU6-241P-201ENST00000391148 104 ntBASIC1.17□□□□□ -2.22
RPL3P39023 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms