Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 SNORD27-201ENST00000363981 72 ntBASIC0.74□□□□□ -2.29
HMGCLP35914 Y_RNA.307-201ENST00000365022 117 ntBASIC0.74□□□□□ -2.29
HMGCLP35914 RNU6-728P-201ENST00000365375 104 ntBASIC0.74□□□□□ -2.29
HMGCLP35914 RNU6-125P-201ENST00000384505 107 ntBASIC0.74□□□□□ -2.29
HMGCLP35914 Y_RNA.622-201ENST00000411091 108 ntBASIC0.74□□□□□ -2.29
HMGCLP35914 AC090844.1-201ENST00000422019 156 ntBASIC0.74□□□□□ -2.29
HMGCLP35914 AC244023.1-201ENST00000426884 112 ntBASIC0.74□□□□□ -2.29
HMGCLP35914 RNU7-96P-201ENST00000459535 64 ntBASIC0.74□□□□□ -2.29
HMGCLP35914 RNU6-998P-201ENST00000515894 101 ntBASIC0.74□□□□□ -2.29
HMGCLP35914 RNU6-1270P-201ENST00000517128 108 ntBASIC0.74□□□□□ -2.29
HMGCLP35914 MIR4452-201ENST00000583004 71 ntBASIC0.74□□□□□ -2.29
HMGCLP35914 AC009779.6-201ENST00000603972 165 ntBASIC0.74□□□□□ -2.29
HMGCLP35914 AC242498.1-201ENST00000604134 111 ntBASIC0.74□□□□□ -2.29
HMGCLP35914 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
HMGCLP35914 RNU6-369P-201ENST00000362515 102 ntBASIC0.73□□□□□ -2.29
HMGCLP35914 Y_RNA.238-201ENST00000364441 102 ntBASIC0.73□□□□□ -2.29
HMGCLP35914 MT-TG-201ENST00000387429 68 ntBASIC0.73□□□□□ -2.29
HMGCLP35914 RNU6-918P-201ENST00000391219 106 ntBASIC0.73□□□□□ -2.29
HMGCLP35914 AL606490.4-201ENST00000423117 127 ntBASIC0.73□□□□□ -2.29
HMGCLP35914 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.73□□□□□ -2.29
HMGCLP35914 FABP5P4-201ENST00000437203 171 ntBASIC0.73□□□□□ -2.29
HMGCLP35914 U7.7-201ENST00000459276 60 ntBASIC0.73□□□□□ -2.29
HMGCLP35914 PSMC1P5-201ENST00000512850 177 ntBASIC0.73□□□□□ -2.29
HMGCLP35914 RNY3P16-201ENST00000516338 101 ntBASIC0.73□□□□□ -2.29
HMGCLP35914 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.73□□□□□ -2.29
HMGCLP35914 MIR4264-201ENST00000583520 66 ntBASIC0.73□□□□□ -2.29
HMGCLP35914 MIR5197-201ENST00000583721 112 ntBASIC0.73□□□□□ -2.29
HMGCLP35914 Y_RNA.75-201ENST00000362927 97 ntBASIC0.72□□□□□ -2.29
HMGCLP35914 RNU6-1189P-201ENST00000383958 107 ntBASIC0.72□□□□□ -2.29
HMGCLP35914 RNU6-574P-201ENST00000384265 107 ntBASIC0.72□□□□□ -2.29
HMGCLP35914 Y_RNA.477-201ENST00000384352 108 ntBASIC0.72□□□□□ -2.29
HMGCLP35914 Y_RNA.571-201ENST00000384753 98 ntBASIC0.72□□□□□ -2.29
HMGCLP35914 Y_RNA.676-201ENST00000516393 96 ntBASIC0.72□□□□□ -2.29
HMGCLP35914 RNU6-1110P-201ENST00000516462 101 ntBASIC0.72□□□□□ -2.29
HMGCLP35914 RNU7-53P-201ENST00000516705 60 ntBASIC0.72□□□□□ -2.29
HMGCLP35914 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
HMGCLP35914 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
HMGCLP35914 Y_RNA.199-201ENST00000364014 102 ntBASIC0.71□□□□□ -2.3
HMGCLP35914 RNU6-275P-201ENST00000364910 107 ntBASIC0.71□□□□□ -2.3
HMGCLP35914 Y_RNA.330-201ENST00000365230 109 ntBASIC0.71□□□□□ -2.3
HMGCLP35914 MIR100-201ENST00000385259 80 ntBASIC0.71□□□□□ -2.3
HMGCLP35914 SNORA26.6-201ENST00000391256 115 ntBASIC0.71□□□□□ -2.3
HMGCLP35914 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.71□□□□□ -2.3
HMGCLP35914 AC006461.1-201ENST00000412637 326 ntBASIC0.71□□□□□ -2.3
HMGCLP35914 AL035398.1-201ENST00000430869 322 ntBASIC0.71□□□□□ -2.3
HMGCLP35914 PDCD5P2-201ENST00000507570 312 ntBASIC0.71□□□□□ -2.3
HMGCLP35914 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.71□□□□□ -2.3
HMGCLP35914 CYP3A137P-201ENST00000562436 69 ntBASIC0.71□□□□□ -2.3
HMGCLP35914 MIR6835-201ENST00000621552 64 ntBASIC0.71□□□□□ -2.3
HMGCLP35914 Y_RNA.65-201ENST00000362846 100 ntBASIC0.7□□□□□ -2.3
HMGCLP35914 Y_RNA.308-201ENST00000365043 101 ntBASIC0.7□□□□□ -2.3
HMGCLP35914 MIR563-201ENST00000385080 79 ntBASIC0.7□□□□□ -2.3
HMGCLP35914 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
HMGCLP35914 MIR1827-201ENST00000408549 66 ntBASIC0.7□□□□□ -2.3
HMGCLP35914 Y_RNA.618-201ENST00000410949 107 ntBASIC0.7□□□□□ -2.3
HMGCLP35914 AC023827.1-201ENST00000569247 97 ntBASIC0.7□□□□□ -2.3
HMGCLP35914 MIR378D2-201ENST00000580636 98 ntBASIC0.7□□□□□ -2.3
HMGCLP35914 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.69□□□□□ -2.3
HMGCLP35914 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
HMGCLP35914 SNORA20.1-201ENST00000364790 130 ntBASIC0.69□□□□□ -2.3
HMGCLP35914 MIR624-201ENST00000385217 97 ntBASIC0.69□□□□□ -2.3
HMGCLP35914 RNU6-493P-201ENST00000391321 108 ntBASIC0.69□□□□□ -2.3
HMGCLP35914 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.69□□□□□ -2.3
HMGCLP35914 RNU7-67P-201ENST00000459003 62 ntBASIC0.69□□□□□ -2.3
HMGCLP35914 RPS29P1-201ENST00000465274 159 ntBASIC0.69□□□□□ -2.3
HMGCLP35914 AC113410.1-201ENST00000505029 247 ntBASIC0.69□□□□□ -2.3
HMGCLP35914 SCARNA15-202ENST00000516881 127 ntBASIC0.69□□□□□ -2.3
HMGCLP35914 RNU6-958P-201ENST00000516995 106 ntBASIC0.69□□□□□ -2.3
HMGCLP35914 MRPS18CP4-201ENST00000535821 231 ntBASIC0.69□□□□□ -2.3
HMGCLP35914 Z83818.1-201ENST00000603584 150 ntBASIC0.69□□□□□ -2.3
HMGCLP35914 AP000753.3-201ENST00000604083 169 ntBASIC0.69□□□□□ -2.3
HMGCLP35914 RNU2-4P-201ENST00000606190 192 ntBASIC0.69□□□□□ -2.3
HMGCLP35914 MIR411-201ENST00000362239 96 ntBASIC0.68□□□□□ -2.3
HMGCLP35914 Y_RNA.200-201ENST00000364018 102 ntBASIC0.68□□□□□ -2.3
HMGCLP35914 RNU6-597P-201ENST00000365620 102 ntBASIC0.68□□□□□ -2.3
HMGCLP35914 RNU6-643P-201ENST00000384018 107 ntBASIC0.68□□□□□ -2.3
HMGCLP35914 Y_RNA.430-201ENST00000384081 110 ntBASIC0.68□□□□□ -2.3
HMGCLP35914 MIR608-201ENST00000384820 100 ntBASIC0.68□□□□□ -2.3
HMGCLP35914 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
HMGCLP35914 MIR942-201ENST00000401111 86 ntBASIC0.68□□□□□ -2.3
HMGCLP35914 RNA5SP95-201ENST00000410319 137 ntBASIC0.68□□□□□ -2.3
HMGCLP35914 RNU6-602P-201ENST00000411155 105 ntBASIC0.68□□□□□ -2.3
HMGCLP35914 SNORD116-25-201ENST00000516517 92 ntBASIC0.68□□□□□ -2.3
HMGCLP35914 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.68□□□□□ -2.3
HMGCLP35914 RNU6-94P-201ENST00000607728 107 ntBASIC0.68□□□□□ -2.3
HMGCLP35914 Y_RNA.412-201ENST00000384001 104 ntBASIC0.67□□□□□ -2.3
HMGCLP35914 SNORD89-201ENST00000390981 114 ntBASIC0.67□□□□□ -2.3
HMGCLP35914 SNORA79-201ENST00000408376 140 ntBASIC0.67□□□□□ -2.3
HMGCLP35914 MIR548I3-201ENST00000408378 149 ntBASIC0.67□□□□□ -2.3
HMGCLP35914 AL121914.1-201ENST00000450188 156 ntBASIC0.67□□□□□ -2.3
HMGCLP35914 MIR3129-201ENST00000581095 76 ntBASIC0.67□□□□□ -2.3
HMGCLP35914 AC025627.3-201ENST00000582078 182 ntBASIC0.67□□□□□ -2.3
HMGCLP35914 AL590095.2-201ENST00000604136 117 ntBASIC0.67□□□□□ -2.3
HMGCLP35914 AL353765.1-201ENST00000605514 183 ntBASIC0.67□□□□□ -2.3
HMGCLP35914 MIR6788-201ENST00000618842 66 ntBASIC0.67□□□□□ -2.3
HMGCLP35914 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
HMGCLP35914 RNU6-923P-201ENST00000364753 107 ntBASIC0.66□□□□□ -2.3
HMGCLP35914 RNU6-1335P-201ENST00000365426 107 ntBASIC0.66□□□□□ -2.3
HMGCLP35914 SNORA2B-201ENST00000384583 137 ntBASIC0.66□□□□□ -2.3
HMGCLP35914 MIR548J-201ENST00000408833 112 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 181.9 ms