Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 MIR18A-201ENST00000362310 71 ntBASIC0.29□□□□□ -2.36
SCN4AP35499 Y_RNA.547-201ENST00000384654 119 ntBASIC0.29□□□□□ -2.36
SCN4AP35499 MIR1252-201ENST00000408861 65 ntBASIC0.29□□□□□ -2.36
SCN4AP35499 RNU7-185P-201ENST00000459215 60 ntBASIC0.29□□□□□ -2.36
SCN4AP35499 RNU6-998P-201ENST00000515894 101 ntBASIC0.29□□□□□ -2.36
SCN4AP35499 SNORD77.4-201ENST00000516158 81 ntBASIC0.29□□□□□ -2.36
SCN4AP35499 RNU6-570P-201ENST00000517051 105 ntBASIC0.29□□□□□ -2.36
SCN4AP35499 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.29□□□□□ -2.36
SCN4AP35499 MIR377-201ENST00000362145 69 ntBASIC0.29□□□□□ -2.36
SCN4AP35499 MIR302B-201ENST00000362188 73 ntBASIC0.29□□□□□ -2.36
SCN4AP35499 SNORD18A-201ENST00000363753 72 ntBASIC0.29□□□□□ -2.36
SCN4AP35499 Y_RNA.241-201ENST00000364470 117 ntBASIC0.29□□□□□ -2.36
SCN4AP35499 SNORA1.1-201ENST00000364671 133 ntBASIC0.29□□□□□ -2.36
SCN4AP35499 Y_RNA.535-201ENST00000384612 99 ntBASIC0.29□□□□□ -2.36
SCN4AP35499 MIR573-201ENST00000384964 99 ntBASIC0.29□□□□□ -2.36
SCN4AP35499 SNORA79-201ENST00000408376 140 ntBASIC0.29□□□□□ -2.36
SCN4AP35499 AC002350.1-201ENST00000490759 375 ntBASIC0.29□□□□□ -2.36
SCN4AP35499 SNORD92-201ENST00000585078 85 ntBASIC0.29□□□□□ -2.36
SCN4AP35499 AL162730.1-201ENST00000605734 292 ntBASIC0.29□□□□□ -2.36
SCN4AP35499 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.28□□□□□ -2.36
SCN4AP35499 MIR103A1-201ENST00000362165 78 ntBASIC0.28□□□□□ -2.36
SCN4AP35499 SNORA9.1-201ENST00000362412 131 ntBASIC0.28□□□□□ -2.36
SCN4AP35499 Y_RNA.203-201ENST00000364106 102 ntBASIC0.28□□□□□ -2.36
SCN4AP35499 Y_RNA.455-201ENST00000384230 98 ntBASIC0.28□□□□□ -2.36
SCN4AP35499 Y_RNA.486-201ENST00000384398 107 ntBASIC0.28□□□□□ -2.36
SCN4AP35499 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.28□□□□□ -2.36
SCN4AP35499 MIR2115-201ENST00000516657 100 ntBASIC0.28□□□□□ -2.36
SCN4AP35499 Y_RNA.702-201ENST00000516843 96 ntBASIC0.28□□□□□ -2.36
SCN4AP35499 RNU2-31P-201ENST00000516954 155 ntBASIC0.28□□□□□ -2.36
SCN4AP35499 Y_RNA.138-201ENST00000363462 102 ntBASIC0.27□□□□□ -2.37
SCN4AP35499 SNORA33.2-201ENST00000365413 134 ntBASIC0.27□□□□□ -2.37
SCN4AP35499 Y_RNA.380-201ENST00000365663 111 ntBASIC0.27□□□□□ -2.37
SCN4AP35499 Y_RNA.549-201ENST00000384657 102 ntBASIC0.27□□□□□ -2.37
SCN4AP35499 MIR626-201ENST00000385032 94 ntBASIC0.27□□□□□ -2.37
SCN4AP35499 MIR548P-201ENST00000408336 84 ntBASIC0.27□□□□□ -2.37
SCN4AP35499 RPL39P25-201ENST00000449384 154 ntBASIC0.27□□□□□ -2.37
SCN4AP35499 Z97988.1-201ENST00000637697 135 ntBASIC0.27□□□□□ -2.37
SCN4AP35499 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
SCN4AP35499 Y_RNA.82-201ENST00000363000 102 ntBASIC0.27□□□□□ -2.37
SCN4AP35499 Y_RNA.92-201ENST00000363043 102 ntBASIC0.27□□□□□ -2.37
SCN4AP35499 Y_RNA.210-201ENST00000364161 110 ntBASIC0.27□□□□□ -2.37
SCN4AP35499 Y_RNA.235-201ENST00000364412 102 ntBASIC0.27□□□□□ -2.37
SCN4AP35499 Y_RNA.306-201ENST00000365015 102 ntBASIC0.27□□□□□ -2.37
SCN4AP35499 Y_RNA.308-201ENST00000365043 101 ntBASIC0.27□□□□□ -2.37
SCN4AP35499 Y_RNA.312-201ENST00000365089 102 ntBASIC0.27□□□□□ -2.37
SCN4AP35499 Y_RNA.322-201ENST00000365151 102 ntBASIC0.27□□□□□ -2.37
SCN4AP35499 RNU6-1009P-201ENST00000390996 107 ntBASIC0.27□□□□□ -2.37
SCN4AP35499 SNORD77.3-201ENST00000391113 65 ntBASIC0.27□□□□□ -2.37
SCN4AP35499 SNORA26.6-201ENST00000391256 115 ntBASIC0.27□□□□□ -2.37
SCN4AP35499 MTND5P22-201ENST00000458380 195 ntBASIC0.27□□□□□ -2.37
SCN4AP35499 Y_RNA.650-201ENST00000459002 102 ntBASIC0.27□□□□□ -2.37
SCN4AP35499 Y_RNA.777-201ENST00000516982 102 ntBASIC0.27□□□□□ -2.37
SCN4AP35499 MIR4771-2-201ENST00000577758 74 ntBASIC0.27□□□□□ -2.37
SCN4AP35499 MIR4771-1-201ENST00000582617 74 ntBASIC0.27□□□□□ -2.37
SCN4AP35499 Y_RNA.771-201ENST00000598668 102 ntBASIC0.27□□□□□ -2.37
SCN4AP35499 RNU6-94P-201ENST00000607728 107 ntBASIC0.27□□□□□ -2.37
SCN4AP35499 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.27□□□□□ -2.37
SCN4AP35499 Y_RNA.789-201ENST00000622480 102 ntBASIC0.27□□□□□ -2.37
SCN4AP35499 AC090625.1-201ENST00000357130 210 ntBASIC0.26□□□□□ -2.37
SCN4AP35499 Y_RNA.199-201ENST00000364014 102 ntBASIC0.26□□□□□ -2.37
SCN4AP35499 Y_RNA.286-201ENST00000364813 102 ntBASIC0.26□□□□□ -2.37
SCN4AP35499 RNU6-1327P-201ENST00000365302 105 ntBASIC0.26□□□□□ -2.37
SCN4AP35499 Y_RNA.569-201ENST00000384749 103 ntBASIC0.26□□□□□ -2.37
SCN4AP35499 MT-TF-201ENST00000387314 71 ntBASIC0.26□□□□□ -2.37
SCN4AP35499 RNU6-1109P-201ENST00000391187 107 ntBASIC0.26□□□□□ -2.37
SCN4AP35499 RNU6-651P-201ENST00000411040 105 ntBASIC0.26□□□□□ -2.37
SCN4AP35499 AC113618.1-201ENST00000416747 285 ntBASIC0.26□□□□□ -2.37
SCN4AP35499 RNU6-863P-201ENST00000515989 104 ntBASIC0.26□□□□□ -2.37
SCN4AP35499 RNU6-988P-201ENST00000519081 107 ntBASIC0.26□□□□□ -2.37
SCN4AP35499 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.26□□□□□ -2.37
SCN4AP35499 MIR4315-1-201ENST00000636800 73 ntBASIC0.26□□□□□ -2.37
SCN4AP35499 MIR4315-2-201ENST00000640925 73 ntBASIC0.26□□□□□ -2.37
SCN4AP35499 Y_RNA.16-201ENST00000362421 102 ntBASIC0.25□□□□□ -2.37
SCN4AP35499 RNU6-290P-201ENST00000365212 101 ntBASIC0.25□□□□□ -2.37
SCN4AP35499 RNU6-326P-201ENST00000365480 107 ntBASIC0.25□□□□□ -2.37
SCN4AP35499 RNU6-1189P-201ENST00000383958 107 ntBASIC0.25□□□□□ -2.37
SCN4AP35499 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.25□□□□□ -2.37
SCN4AP35499 MTND5P34-201ENST00000568888 325 ntBASIC0.25□□□□□ -2.37
SCN4AP35499 MIR4491-201ENST00000581087 68 ntBASIC0.25□□□□□ -2.37
SCN4AP35499 AC015726.2-201ENST00000620112 122 ntBASIC0.25□□□□□ -2.37
SCN4AP35499 AC092634.7-201ENST00000621022 103 ntBASIC0.25□□□□□ -2.37
SCN4AP35499 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.25□□□□□ -2.37
SCN4AP35499 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.25□□□□□ -2.37
SCN4AP35499 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
SCN4AP35499 Y_RNA.105-201ENST00000363182 111 ntBASIC0.24□□□□□ -2.37
SCN4AP35499 SNORD61-201ENST00000384252 73 ntBASIC0.24□□□□□ -2.37
SCN4AP35499 Y_RNA.460-201ENST00000384255 102 ntBASIC0.24□□□□□ -2.37
SCN4AP35499 RNU6-102P-201ENST00000384485 104 ntBASIC0.24□□□□□ -2.37
SCN4AP35499 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.24□□□□□ -2.37
SCN4AP35499 RNU5E-9P-201ENST00000411164 104 ntBASIC0.24□□□□□ -2.37
SCN4AP35499 Z95118.1-201ENST00000421372 247 ntBASIC0.24□□□□□ -2.37
SCN4AP35499 AC067940.1-201ENST00000458411 300 ntBASIC0.24□□□□□ -2.37
SCN4AP35499 RNU6-191P-201ENST00000516295 94 ntBASIC0.24□□□□□ -2.37
SCN4AP35499 SNORA40.15-201ENST00000516884 107 ntBASIC0.24□□□□□ -2.37
SCN4AP35499 RNU6-1270P-201ENST00000517128 108 ntBASIC0.24□□□□□ -2.37
SCN4AP35499 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.24□□□□□ -2.37
SCN4AP35499 AC020661.2-201ENST00000560114 134 ntBASIC0.24□□□□□ -2.37
SCN4AP35499 MIR4667-201ENST00000578933 66 ntBASIC0.24□□□□□ -2.37
SCN4AP35499 MIR4305-201ENST00000583252 102 ntBASIC0.24□□□□□ -2.37
SCN4AP35499 AC006006.1-201ENST00000603082 144 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 290.7 ms