Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 SNORA75.5-201ENST00000391291 81 ntBASIC1.22□□□□□ -2.21
HOXC8P31273 RNA5SP127-201ENST00000411051 133 ntBASIC1.22□□□□□ -2.21
HOXC8P31273 MIR4295-201ENST00000585286 85 ntBASIC1.22□□□□□ -2.21
HOXC8P31273 RNU6-774P-201ENST00000363238 107 ntBASIC1.21□□□□□ -2.22
HOXC8P31273 Y_RNA.370-201ENST00000365589 108 ntBASIC1.21□□□□□ -2.22
HOXC8P31273 RNU6-1189P-201ENST00000383958 107 ntBASIC1.21□□□□□ -2.22
HOXC8P31273 MIR520C-201ENST00000385005 87 ntBASIC1.21□□□□□ -2.22
HOXC8P31273 AL591704.2-201ENST00000421658 181 ntBASIC1.21□□□□□ -2.22
HOXC8P31273 AC087499.4-201ENST00000448505 178 ntBASIC1.21□□□□□ -2.22
HOXC8P31273 OR2A41P-201ENST00000473586 105 ntBASIC1.21□□□□□ -2.22
HOXC8P31273 AC087343.1-201ENST00000477341 475 ntBASIC1.21□□□□□ -2.22
HOXC8P31273 RNU6-346P-201ENST00000516288 111 ntBASIC1.21□□□□□ -2.22
HOXC8P31273 SNORD111.1-201ENST00000516421 86 ntBASIC1.21□□□□□ -2.22
HOXC8P31273 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.21□□□□□ -2.22
HOXC8P31273 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.21□□□□□ -2.22
HOXC8P31273 AC112693.2-201ENST00000556538 232 ntBASIC1.21□□□□□ -2.22
HOXC8P31273 MIR3646-201ENST00000578301 84 ntBASIC1.21□□□□□ -2.22
HOXC8P31273 MIR4764-201ENST00000580680 88 ntBASIC1.21□□□□□ -2.22
HOXC8P31273 AC022709.1-201ENST00000615967 87 ntBASIC1.21□□□□□ -2.22
HOXC8P31273 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.21□□□□□ -2.22
HOXC8P31273 MTND1P7-201ENST00000632801 297 ntBASIC1.21□□□□□ -2.22
HOXC8P31273 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.2□□□□□ -2.22
HOXC8P31273 MIR373-201ENST00000362273 69 ntBASIC1.2□□□□□ -2.22
HOXC8P31273 Y_RNA.354-201ENST00000365448 111 ntBASIC1.2□□□□□ -2.22
HOXC8P31273 RNU6-1292P-201ENST00000383856 107 ntBASIC1.2□□□□□ -2.22
HOXC8P31273 Y_RNA.410-201ENST00000383992 113 ntBASIC1.2□□□□□ -2.22
HOXC8P31273 MIR624-201ENST00000385217 97 ntBASIC1.2□□□□□ -2.22
HOXC8P31273 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
HOXC8P31273 RPS26P48-201ENST00000491713 339 ntBASIC1.2□□□□□ -2.22
HOXC8P31273 RNU7-200P-201ENST00000516105 62 ntBASIC1.2□□□□□ -2.22
HOXC8P31273 SNORA25.12-201ENST00000516202 82 ntBASIC1.2□□□□□ -2.22
HOXC8P31273 MIR5197-201ENST00000583721 112 ntBASIC1.2□□□□□ -2.22
HOXC8P31273 AL022345.2-201ENST00000606307 135 ntBASIC1.2□□□□□ -2.22
HOXC8P31273 MIR342-201ENST00000362212 99 ntBASIC1.19□□□□□ -2.22
HOXC8P31273 SNORA1.2-201ENST00000365189 134 ntBASIC1.19□□□□□ -2.22
HOXC8P31273 Y_RNA.400-201ENST00000383963 111 ntBASIC1.19□□□□□ -2.22
HOXC8P31273 SNORA27-201ENST00000384323 126 ntBASIC1.19□□□□□ -2.22
HOXC8P31273 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.19□□□□□ -2.22
HOXC8P31273 AL133373.1-201ENST00000497098 94 ntBASIC1.19□□□□□ -2.22
HOXC8P31273 RNU7-41P-201ENST00000515917 61 ntBASIC1.19□□□□□ -2.22
HOXC8P31273 SNORA31.2-201ENST00000516019 134 ntBASIC1.19□□□□□ -2.22
HOXC8P31273 RNU7-43P-201ENST00000516554 64 ntBASIC1.19□□□□□ -2.22
HOXC8P31273 RNU6-165P-201ENST00000517170 99 ntBASIC1.19□□□□□ -2.22
HOXC8P31273 AL096861.1-201ENST00000610899 123 ntBASIC1.19□□□□□ -2.22
HOXC8P31273 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.19□□□□□ -2.22
HOXC8P31273 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
HOXC8P31273 SNORD115-34-201ENST00000362441 82 ntBASIC1.18□□□□□ -2.22
HOXC8P31273 SNORD115-12-201ENST00000362583 82 ntBASIC1.18□□□□□ -2.22
HOXC8P31273 Y_RNA.52-201ENST00000362760 96 ntBASIC1.18□□□□□ -2.22
HOXC8P31273 SNORD115-29-201ENST00000362834 82 ntBASIC1.18□□□□□ -2.22
HOXC8P31273 SNORD115-9-201ENST00000362912 82 ntBASIC1.18□□□□□ -2.22
HOXC8P31273 SNORD115-21-201ENST00000362963 81 ntBASIC1.18□□□□□ -2.22
HOXC8P31273 SNORD115-14-201ENST00000363090 81 ntBASIC1.18□□□□□ -2.22
HOXC8P31273 SNORD115-13-201ENST00000363358 82 ntBASIC1.18□□□□□ -2.22
HOXC8P31273 SNORD115-41-201ENST00000363608 82 ntBASIC1.18□□□□□ -2.22
HOXC8P31273 SNORD115-11-201ENST00000363616 82 ntBASIC1.18□□□□□ -2.22
HOXC8P31273 SNORD115-5-201ENST00000363633 82 ntBASIC1.18□□□□□ -2.22
HOXC8P31273 SNORD115-39-201ENST00000363694 82 ntBASIC1.18□□□□□ -2.22
HOXC8P31273 SNORD115-4-201ENST00000363810 82 ntBASIC1.18□□□□□ -2.22
HOXC8P31273 SNORD115-16-201ENST00000363887 82 ntBASIC1.18□□□□□ -2.22
HOXC8P31273 SNORD115-6-201ENST00000363942 82 ntBASIC1.18□□□□□ -2.22
HOXC8P31273 Y_RNA.215-201ENST00000364204 112 ntBASIC1.18□□□□□ -2.22
HOXC8P31273 SNORD115-42-201ENST00000364273 82 ntBASIC1.18□□□□□ -2.22
HOXC8P31273 SNORD115-15-201ENST00000364809 81 ntBASIC1.18□□□□□ -2.22
HOXC8P31273 SNORD115-1-201ENST00000364961 82 ntBASIC1.18□□□□□ -2.22
HOXC8P31273 SNORD115-26-201ENST00000365067 82 ntBASIC1.18□□□□□ -2.22
HOXC8P31273 SNORD115-10-201ENST00000365073 81 ntBASIC1.18□□□□□ -2.22
HOXC8P31273 SNORD115-43-201ENST00000365503 82 ntBASIC1.18□□□□□ -2.22
HOXC8P31273 SNORD115-36-201ENST00000365629 82 ntBASIC1.18□□□□□ -2.22
HOXC8P31273 Y_RNA.440-201ENST00000384120 114 ntBASIC1.18□□□□□ -2.22
HOXC8P31273 SNORA70.7-201ENST00000384159 133 ntBASIC1.18□□□□□ -2.22
HOXC8P31273 Y_RNA.497-201ENST00000384447 98 ntBASIC1.18□□□□□ -2.22
HOXC8P31273 Y_RNA.506-201ENST00000384494 102 ntBASIC1.18□□□□□ -2.22
HOXC8P31273 SNORA40.5-201ENST00000391061 128 ntBASIC1.18□□□□□ -2.22
HOXC8P31273 MIR3192-201ENST00000584920 77 ntBASIC1.18□□□□□ -2.22
HOXC8P31273 SNORD115-40-201ENST00000606510 82 ntBASIC1.18□□□□□ -2.22
HOXC8P31273 MIR4791-201ENST00000607666 84 ntBASIC1.18□□□□□ -2.22
HOXC8P31273 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.18□□□□□ -2.22
HOXC8P31273 AC008133.2-201ENST00000624540 351 ntBASIC1.18□□□□□ -2.22
HOXC8P31273 MTND5P32-201ENST00000560711 1802 ntBASIC1.17□□□□□ -2.22
HOXC8P31273 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
HOXC8P31273 MIR513C-201ENST00000401352 84 ntBASIC1.17□□□□□ -2.22
HOXC8P31273 AC107297.1-201ENST00000459991 176 ntBASIC1.17□□□□□ -2.22
HOXC8P31273 RPS29P1-201ENST00000465274 159 ntBASIC1.17□□□□□ -2.22
HOXC8P31273 RNA5SP272-201ENST00000516095 111 ntBASIC1.17□□□□□ -2.22
HOXC8P31273 RNU6-113P-201ENST00000516653 101 ntBASIC1.17□□□□□ -2.22
HOXC8P31273 RNU6-1149P-201ENST00000516810 97 ntBASIC1.17□□□□□ -2.22
HOXC8P31273 RNA5SP404-201ENST00000517118 132 ntBASIC1.17□□□□□ -2.22
HOXC8P31273 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.17□□□□□ -2.22
HOXC8P31273 MIR3133-201ENST00000583157 78 ntBASIC1.17□□□□□ -2.22
HOXC8P31273 AC131055.1-201ENST00000584626 316 ntBASIC1.17□□□□□ -2.22
HOXC8P31273 MIR6788-201ENST00000618842 66 ntBASIC1.17□□□□□ -2.22
HOXC8P31273 Y_RNA.351-201ENST00000365436 96 ntBASIC1.16□□□□□ -2.22
HOXC8P31273 Y_RNA.488-201ENST00000384403 102 ntBASIC1.16□□□□□ -2.22
HOXC8P31273 SNORA51.10-201ENST00000384418 136 ntBASIC1.16□□□□□ -2.22
HOXC8P31273 RNU6-125P-201ENST00000384505 107 ntBASIC1.16□□□□□ -2.22
HOXC8P31273 SNORA20-201ENST00000384662 132 ntBASIC1.16□□□□□ -2.22
HOXC8P31273 RNU6-910P-201ENST00000390844 107 ntBASIC1.16□□□□□ -2.22
HOXC8P31273 Y_RNA.584-201ENST00000391090 114 ntBASIC1.16□□□□□ -2.22
HOXC8P31273 RNU6-460P-201ENST00000391158 108 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 190 ms