Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 RNA5SP264-201ENST00000363115 107 ntBASIC1.66□□□□□ -2.14
CNGA1P29973 Y_RNA.580-201ENST00000391004 95 ntBASIC1.66□□□□□ -2.14
CNGA1P29973 RNU7-73P-201ENST00000458743 63 ntBASIC1.66□□□□□ -2.14
CNGA1P29973 RNU7-67P-201ENST00000459003 62 ntBASIC1.66□□□□□ -2.14
CNGA1P29973 MIR6078-201ENST00000611069 100 ntBASIC1.66□□□□□ -2.14
CNGA1P29973 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CNGA1P29973 SNORA25.3-201ENST00000363205 127 ntBASIC1.65□□□□□ -2.15
CNGA1P29973 RNU6-53P-201ENST00000365367 106 ntBASIC1.65□□□□□ -2.15
CNGA1P29973 SNORD114-22-201ENST00000365423 72 ntBASIC1.65□□□□□ -2.15
CNGA1P29973 MIR1302-7-201ENST00000408841 72 ntBASIC1.65□□□□□ -2.15
CNGA1P29973 RNU1-98P-201ENST00000458992 160 ntBASIC1.65□□□□□ -2.15
CNGA1P29973 snoU13.16-201ENST00000459350 104 ntBASIC1.65□□□□□ -2.15
CNGA1P29973 AC023790.1-201ENST00000482174 347 ntBASIC1.65□□□□□ -2.15
CNGA1P29973 SCARNA15-202ENST00000516881 127 ntBASIC1.65□□□□□ -2.15
CNGA1P29973 MIR6844-201ENST00000637122 62 ntBASIC1.65□□□□□ -2.15
CNGA1P29973 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.65□□□□□ -2.15
CNGA1P29973 RNA5SP327-201ENST00000362494 101 ntBASIC1.64□□□□□ -2.15
CNGA1P29973 Y_RNA.363-201ENST00000365529 113 ntBASIC1.64□□□□□ -2.15
CNGA1P29973 MIR548I3-201ENST00000408378 149 ntBASIC1.64□□□□□ -2.15
CNGA1P29973 MIR1185-1-201ENST00000408598 86 ntBASIC1.64□□□□□ -2.15
CNGA1P29973 MIR548I1-201ENST00000408810 149 ntBASIC1.64□□□□□ -2.15
CNGA1P29973 AL035398.1-201ENST00000430869 322 ntBASIC1.64□□□□□ -2.15
CNGA1P29973 AL392103.1-201ENST00000447000 198 ntBASIC1.64□□□□□ -2.15
CNGA1P29973 RNU7-53P-201ENST00000516705 60 ntBASIC1.64□□□□□ -2.15
CNGA1P29973 MIR548AO-201ENST00000579992 96 ntBASIC1.64□□□□□ -2.15
CNGA1P29973 AC104465.1-201ENST00000611365 139 ntBASIC1.64□□□□□ -2.15
CNGA1P29973 MIR103A2-201ENST00000362154 78 ntBASIC1.63□□□□□ -2.15
CNGA1P29973 RNU6-958P-201ENST00000516995 106 ntBASIC1.63□□□□□ -2.15
CNGA1P29973 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.63□□□□□ -2.15
CNGA1P29973 MIR3144-201ENST00000579460 79 ntBASIC1.63□□□□□ -2.15
CNGA1P29973 RNU6-818P-201ENST00000364837 108 ntBASIC1.62□□□□□ -2.15
CNGA1P29973 RNU6-1130P-201ENST00000365434 107 ntBASIC1.62□□□□□ -2.15
CNGA1P29973 Y_RNA.351-201ENST00000365436 96 ntBASIC1.62□□□□□ -2.15
CNGA1P29973 Y_RNA.464-201ENST00000384282 110 ntBASIC1.62□□□□□ -2.15
CNGA1P29973 RNU6-804P-201ENST00000384286 107 ntBASIC1.62□□□□□ -2.15
CNGA1P29973 RNU6-910P-201ENST00000390844 107 ntBASIC1.62□□□□□ -2.15
CNGA1P29973 RPS29P23-201ENST00000458635 123 ntBASIC1.62□□□□□ -2.15
CNGA1P29973 RNU7-80P-201ENST00000459562 61 ntBASIC1.62□□□□□ -2.15
CNGA1P29973 RNU6-1149P-201ENST00000516810 97 ntBASIC1.62□□□□□ -2.15
CNGA1P29973 Y_RNA.52-201ENST00000362760 96 ntBASIC1.61□□□□□ -2.15
CNGA1P29973 RNU6-449P-201ENST00000383914 107 ntBASIC1.61□□□□□ -2.15
CNGA1P29973 RNU6-913P-201ENST00000390913 95 ntBASIC1.61□□□□□ -2.15
CNGA1P29973 RNU6-588P-201ENST00000410281 105 ntBASIC1.61□□□□□ -2.15
CNGA1P29973 RNU6-955P-201ENST00000410497 104 ntBASIC1.61□□□□□ -2.15
CNGA1P29973 RNU2-11P-201ENST00000459191 187 ntBASIC1.61□□□□□ -2.15
CNGA1P29973 SNORD79.1-201ENST00000516069 84 ntBASIC1.61□□□□□ -2.15
CNGA1P29973 RNU11-2P-201ENST00000516898 142 ntBASIC1.61□□□□□ -2.15
CNGA1P29973 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.61□□□□□ -2.15
CNGA1P29973 AC131055.1-201ENST00000584626 316 ntBASIC1.61□□□□□ -2.15
CNGA1P29973 AL022345.2-201ENST00000606307 135 ntBASIC1.61□□□□□ -2.15
CNGA1P29973 RMST_2.1-201ENST00000617263 136 ntBASIC1.61□□□□□ -2.15
CNGA1P29973 AC091932.4-201ENST00000623386 200 ntBASIC1.61□□□□□ -2.15
CNGA1P29973 SNORD116-18-201ENST00000383961 92 ntBASIC1.6□□□□□ -2.15
CNGA1P29973 MIR320A-201ENST00000385302 82 ntBASIC1.6□□□□□ -2.15
CNGA1P29973 MT-TR-201ENST00000387439 65 ntBASIC1.6□□□□□ -2.15
CNGA1P29973 SNORD37.2-201ENST00000391075 66 ntBASIC1.6□□□□□ -2.15
CNGA1P29973 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.6□□□□□ -2.15
CNGA1P29973 RNU6-1212P-201ENST00000517023 104 ntBASIC1.6□□□□□ -2.15
CNGA1P29973 SNORA70.22-201ENST00000517160 124 ntBASIC1.6□□□□□ -2.15
CNGA1P29973 Y_RNA.778-201ENST00000620203 90 ntBASIC1.6□□□□□ -2.15
CNGA1P29973 MTND5P32-201ENST00000560711 1802 ntBASIC1.6□□□□□ -2.15
CNGA1P29973 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.15
CNGA1P29973 AL161722.3-201ENST00000605789 2983 ntBASIC1.59□□□□□ -2.15
CNGA1P29973 Y_RNA.454-201ENST00000384224 113 ntBASIC1.59□□□□□ -2.15
CNGA1P29973 SNORA25-201ENST00000384384 134 ntBASIC1.59□□□□□ -2.15
CNGA1P29973 Y_RNA.497-201ENST00000384447 98 ntBASIC1.59□□□□□ -2.15
CNGA1P29973 SNORA75.2-201ENST00000391138 150 ntBASIC1.59□□□□□ -2.15
CNGA1P29973 SNORA75.3-201ENST00000391231 150 ntBASIC1.59□□□□□ -2.15
CNGA1P29973 AL020996.3-201ENST00000606617 222 ntBASIC1.59□□□□□ -2.15
CNGA1P29973 U8.1-201ENST00000362843 134 ntBASIC1.58□□□□□ -2.16
CNGA1P29973 RNU4-11P-201ENST00000365287 132 ntBASIC1.58□□□□□ -2.16
CNGA1P29973 Y_RNA.398-201ENST00000383952 99 ntBASIC1.58□□□□□ -2.16
CNGA1P29973 RNU6-209P-201ENST00000384118 107 ntBASIC1.58□□□□□ -2.16
CNGA1P29973 SNORA80D-201ENST00000384488 135 ntBASIC1.58□□□□□ -2.16
CNGA1P29973 MIR7-2-201ENST00000384970 110 ntBASIC1.58□□□□□ -2.16
CNGA1P29973 SNORD12-201ENST00000391002 90 ntBASIC1.58□□□□□ -2.16
CNGA1P29973 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.58□□□□□ -2.16
CNGA1P29973 MIR8055-201ENST00000610739 97 ntBASIC1.58□□□□□ -2.16
CNGA1P29973 AC027335.2-201ENST00000624030 375 ntBASIC1.58□□□□□ -2.16
CNGA1P29973 MIR342-201ENST00000362212 99 ntBASIC1.57□□□□□ -2.16
CNGA1P29973 Y_RNA.8-201ENST00000362353 102 ntBASIC1.57□□□□□ -2.16
CNGA1P29973 RNU6-151P-201ENST00000364158 107 ntBASIC1.57□□□□□ -2.16
CNGA1P29973 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CNGA1P29973 AL591704.2-201ENST00000421658 181 ntBASIC1.57□□□□□ -2.16
CNGA1P29973 RNU7-21P-201ENST00000459430 62 ntBASIC1.57□□□□□ -2.16
CNGA1P29973 RNA5SP236-201ENST00000516169 116 ntBASIC1.57□□□□□ -2.16
CNGA1P29973 AC112693.2-201ENST00000556538 232 ntBASIC1.57□□□□□ -2.16
CNGA1P29973 MIR7974-201ENST00000615835 79 ntBASIC1.57□□□□□ -2.16
CNGA1P29973 SEPT14P17-201ENST00000617978 177 ntBASIC1.57□□□□□ -2.16
CNGA1P29973 Z97988.1-201ENST00000637697 135 ntBASIC1.57□□□□□ -2.16
CNGA1P29973 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
CNGA1P29973 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CNGA1P29973 MIR302B-201ENST00000362188 73 ntBASIC1.56□□□□□ -2.16
CNGA1P29973 RNY1P11-201ENST00000363759 113 ntBASIC1.56□□□□□ -2.16
CNGA1P29973 Y_RNA.251-201ENST00000364551 99 ntBASIC1.56□□□□□ -2.16
CNGA1P29973 RNU7-70P-201ENST00000516941 66 ntBASIC1.56□□□□□ -2.16
CNGA1P29973 AC019288.1-201ENST00000557918 224 ntBASIC1.56□□□□□ -2.16
CNGA1P29973 MIR6516-201ENST00000630554 81 ntBASIC1.56□□□□□ -2.16
CNGA1P29973 AC021753.1-201ENST00000635724 168 ntBASIC1.56□□□□□ -2.16
CNGA1P29973 AL596211.1-201ENST00000569873 2277 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms