Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 SNORA25.16-201ENST00000516741 121 ntBASIC-0.66□□□□□ -2.52
HLA-DMBP28068 MIR4263-201ENST00000584745 83 ntBASIC-0.66□□□□□ -2.52
HLA-DMBP28068 AC096720.1-201ENST00000604441 183 ntBASIC-0.66□□□□□ -2.52
HLA-DMBP28068 U2.1-201ENST00000618978 145 ntBASIC-0.66□□□□□ -2.52
HLA-DMBP28068 AC099654.14-201ENST00000638599 341 ntBASIC-0.66□□□□□ -2.52
HLA-DMBP28068 AC073869.9-201ENST00000641610 120 ntBASIC-0.66□□□□□ -2.52
HLA-DMBP28068 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.67□□□□□ -2.52
HLA-DMBP28068 SNORD61-201ENST00000384252 73 ntBASIC-0.67□□□□□ -2.52
HLA-DMBP28068 MIR181A1-201ENST00000385026 110 ntBASIC-0.67□□□□□ -2.52
HLA-DMBP28068 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-0.67□□□□□ -2.52
HLA-DMBP28068 AC108059.2-201ENST00000434626 151 ntBASIC-0.67□□□□□ -2.52
HLA-DMBP28068 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-0.67□□□□□ -2.52
HLA-DMBP28068 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-0.67□□□□□ -2.52
HLA-DMBP28068 Y_RNA.631-201ENST00000459607 101 ntBASIC-0.67□□□□□ -2.52
HLA-DMBP28068 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.67□□□□□ -2.52
HLA-DMBP28068 RNU6-314P-201ENST00000516574 104 ntBASIC-0.67□□□□□ -2.52
HLA-DMBP28068 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-0.67□□□□□ -2.52
HLA-DMBP28068 AC138305.3-201ENST00000624988 240 ntBASIC-0.67□□□□□ -2.52
HLA-DMBP28068 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.68□□□□□ -2.52
HLA-DMBP28068 SNORD115-24-201ENST00000363528 82 ntBASIC-0.68□□□□□ -2.52
HLA-DMBP28068 RNU6-899P-201ENST00000363947 107 ntBASIC-0.68□□□□□ -2.52
HLA-DMBP28068 SNORA1-201ENST00000384107 130 ntBASIC-0.68□□□□□ -2.52
HLA-DMBP28068 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.68□□□□□ -2.52
HLA-DMBP28068 RNU6-308P-201ENST00000390957 107 ntBASIC-0.68□□□□□ -2.52
HLA-DMBP28068 RNU6-1248P-201ENST00000391096 64 ntBASIC-0.68□□□□□ -2.52
HLA-DMBP28068 SNORD75.1-201ENST00000408373 60 ntBASIC-0.68□□□□□ -2.52
HLA-DMBP28068 Y_RNA.605-201ENST00000410577 105 ntBASIC-0.68□□□□□ -2.52
HLA-DMBP28068 AC244505.6-201ENST00000452829 130 ntBASIC-0.68□□□□□ -2.52
HLA-DMBP28068 RNU7-169P-201ENST00000459456 61 ntBASIC-0.68□□□□□ -2.52
HLA-DMBP28068 AC074198.2-201ENST00000508153 258 ntBASIC-0.68□□□□□ -2.52
HLA-DMBP28068 RNU6-264P-201ENST00000517134 104 ntBASIC-0.68□□□□□ -2.52
HLA-DMBP28068 MIR4432-201ENST00000581823 84 ntBASIC-0.68□□□□□ -2.52
HLA-DMBP28068 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-0.68□□□□□ -2.52
HLA-DMBP28068 AL049861.1-201ENST00000603130 150 ntBASIC-0.68□□□□□ -2.52
HLA-DMBP28068 AC011373.1-201ENST00000607270 237 ntBASIC-0.68□□□□□ -2.52
HLA-DMBP28068 AL669831.3-213ENST00000636676 183 ntBASIC-0.68□□□□□ -2.52
HLA-DMBP28068 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-0.69□□□□□ -2.52
HLA-DMBP28068 MIR655-201ENST00000362159 97 ntBASIC-0.69□□□□□ -2.52
HLA-DMBP28068 Y_RNA.9-201ENST00000362354 101 ntBASIC-0.69□□□□□ -2.52
HLA-DMBP28068 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.69□□□□□ -2.52
HLA-DMBP28068 SNORA63.5-201ENST00000363548 123 ntBASIC-0.69□□□□□ -2.52
HLA-DMBP28068 SNORD114-11-201ENST00000363738 75 ntBASIC-0.69□□□□□ -2.52
HLA-DMBP28068 RNY3P11-201ENST00000364153 102 ntBASIC-0.69□□□□□ -2.52
HLA-DMBP28068 RNU6-811P-201ENST00000384069 107 ntBASIC-0.69□□□□□ -2.52
HLA-DMBP28068 RNU4-63P-201ENST00000411313 118 ntBASIC-0.69□□□□□ -2.52
HLA-DMBP28068 MTND3P8-201ENST00000412909 339 ntBASIC-0.69□□□□□ -2.52
HLA-DMBP28068 RNU7-45P-201ENST00000459460 63 ntBASIC-0.69□□□□□ -2.52
HLA-DMBP28068 AC114755.3-201ENST00000481111 251 ntBASIC-0.69□□□□□ -2.52
HLA-DMBP28068 RNU6-126P-201ENST00000516685 103 ntBASIC-0.69□□□□□ -2.52
HLA-DMBP28068 RNU6-1213P-201ENST00000517075 94 ntBASIC-0.69□□□□□ -2.52
HLA-DMBP28068 MTND5P32-201ENST00000560711 1802 ntBASIC-0.69□□□□□ -2.52
HLA-DMBP28068 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.7□□□□□ -2.52
HLA-DMBP28068 MIR628-201ENST00000385229 95 ntBASIC-0.7□□□□□ -2.52
HLA-DMBP28068 MT-TQ-201ENST00000387372 72 ntBASIC-0.7□□□□□ -2.52
HLA-DMBP28068 SNORD41.1-201ENST00000391000 69 ntBASIC-0.7□□□□□ -2.52
HLA-DMBP28068 MIR548L-201ENST00000408303 86 ntBASIC-0.7□□□□□ -2.52
HLA-DMBP28068 AF228730.3-201ENST00000436691 102 ntBASIC-0.7□□□□□ -2.52
HLA-DMBP28068 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-0.7□□□□□ -2.52
HLA-DMBP28068 RNU7-110P-201ENST00000516891 62 ntBASIC-0.7□□□□□ -2.52
HLA-DMBP28068 RNU7-161P-201ENST00000517289 62 ntBASIC-0.7□□□□□ -2.52
HLA-DMBP28068 RNU4-80P-201ENST00000363200 141 ntBASIC-0.71□□□□□ -2.52
HLA-DMBP28068 RNU6-1205P-201ENST00000363625 106 ntBASIC-0.71□□□□□ -2.52
HLA-DMBP28068 RNU6-480P-201ENST00000384332 107 ntBASIC-0.71□□□□□ -2.52
HLA-DMBP28068 Y_RNA.573-201ENST00000384763 105 ntBASIC-0.71□□□□□ -2.52
HLA-DMBP28068 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.71□□□□□ -2.52
HLA-DMBP28068 RNU6-383P-201ENST00000410864 94 ntBASIC-0.71□□□□□ -2.52
HLA-DMBP28068 AC244250.2-201ENST00000418731 148 ntBASIC-0.71□□□□□ -2.52
HLA-DMBP28068 MTATP6P17-201ENST00000431030 672 ntBASIC-0.71□□□□□ -2.52
HLA-DMBP28068 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.71□□□□□ -2.52
HLA-DMBP28068 AC100767.1-201ENST00000528178 123 ntBASIC-0.71□□□□□ -2.52
HLA-DMBP28068 AP003733.2-201ENST00000529409 171 ntBASIC-0.71□□□□□ -2.52
HLA-DMBP28068 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.71□□□□□ -2.52
HLA-DMBP28068 MIR302B-201ENST00000362188 73 ntBASIC-0.72□□□□□ -2.52
HLA-DMBP28068 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.72□□□□□ -2.52
HLA-DMBP28068 SNORD63-201ENST00000384262 68 ntBASIC-0.72□□□□□ -2.52
HLA-DMBP28068 MTATP6P26-201ENST00000445926 662 ntBASIC-0.72□□□□□ -2.52
HLA-DMBP28068 AC010655.3-201ENST00000478818 450 ntBASIC-0.72□□□□□ -2.52
HLA-DMBP28068 RNU6-365P-201ENST00000517113 106 ntBASIC-0.72□□□□□ -2.52
HLA-DMBP28068 MIR548AX-201ENST00000580117 73 ntBASIC-0.72□□□□□ -2.52
HLA-DMBP28068 AL590491.3-201ENST00000610731 82 ntBASIC-0.72□□□□□ -2.52
HLA-DMBP28068 AC084368.1-201ENST00000620935 65 ntBASIC-0.72□□□□□ -2.52
HLA-DMBP28068 AL391099.1-201ENST00000624635 187 ntBASIC-0.72□□□□□ -2.52
HLA-DMBP28068 MIR6841-201ENST00000637129 72 ntBASIC-0.72□□□□□ -2.52
HLA-DMBP28068 Y_RNA.14-201ENST00000362415 103 ntBASIC-0.73□□□□□ -2.53
HLA-DMBP28068 Y_RNA.41-201ENST00000362646 102 ntBASIC-0.73□□□□□ -2.53
HLA-DMBP28068 RNU4-84P-201ENST00000364200 139 ntBASIC-0.73□□□□□ -2.53
HLA-DMBP28068 RNU6-702P-201ENST00000364982 107 ntBASIC-0.73□□□□□ -2.53
HLA-DMBP28068 RNY1P13-201ENST00000365030 105 ntBASIC-0.73□□□□□ -2.53
HLA-DMBP28068 Y_RNA.383-201ENST00000383855 97 ntBASIC-0.73□□□□□ -2.53
HLA-DMBP28068 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-0.73□□□□□ -2.53
HLA-DMBP28068 Y_RNA.772-201ENST00000606692 102 ntBASIC-0.73□□□□□ -2.53
HLA-DMBP28068 MIR6507-201ENST00000613630 70 ntBASIC-0.73□□□□□ -2.53
HLA-DMBP28068 MIR101-2-201ENST00000362195 79 ntBASIC-0.74□□□□□ -2.53
HLA-DMBP28068 MIR342-201ENST00000362212 99 ntBASIC-0.74□□□□□ -2.53
HLA-DMBP28068 Y_RNA.51-201ENST00000362725 102 ntBASIC-0.74□□□□□ -2.53
HLA-DMBP28068 Y_RNA.66-201ENST00000362862 102 ntBASIC-0.74□□□□□ -2.53
HLA-DMBP28068 RNU4-58P-201ENST00000363192 141 ntBASIC-0.74□□□□□ -2.53
HLA-DMBP28068 RNA5SP403-201ENST00000363598 108 ntBASIC-0.74□□□□□ -2.53
HLA-DMBP28068 RNA5SP205-201ENST00000364653 136 ntBASIC-0.74□□□□□ -2.53
HLA-DMBP28068 RNU6-138P-201ENST00000515952 107 ntBASIC-0.74□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms