Protein–RNA interactions for Protein: P27694

RPA1, Replication protein A 70 kDa DNA-binding subunit, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1P27694 RNU6-365P-201ENST00000517113 106 ntBASIC0.71□□□□□ -2.3
RPA1P27694 MIR5688-201ENST00000580619 83 ntBASIC0.71□□□□□ -2.3
RPA1P27694 MIR4714-201ENST00000580728 77 ntBASIC0.71□□□□□ -2.3
RPA1P27694 AL162730.1-201ENST00000605734 292 ntBASIC0.71□□□□□ -2.3
RPA1P27694 MIR8055-201ENST00000610739 97 ntBASIC0.71□□□□□ -2.3
RPA1P27694 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.71□□□□□ -2.3
RPA1P27694 MTND5P32-201ENST00000560711 1802 ntBASIC0.71□□□□□ -2.3
RPA1P27694 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.7□□□□□ -2.3
RPA1P27694 RNU6-978P-201ENST00000364371 103 ntBASIC0.7□□□□□ -2.3
RPA1P27694 Y_RNA.274-201ENST00000364714 101 ntBASIC0.7□□□□□ -2.3
RPA1P27694 RNU6-702P-201ENST00000364982 107 ntBASIC0.7□□□□□ -2.3
RPA1P27694 SNORD24-201ENST00000383884 75 ntBASIC0.7□□□□□ -2.3
RPA1P27694 Y_RNA.432-201ENST00000384087 111 ntBASIC0.7□□□□□ -2.3
RPA1P27694 Y_RNA.440-201ENST00000384120 114 ntBASIC0.7□□□□□ -2.3
RPA1P27694 RNU6-918P-201ENST00000391219 106 ntBASIC0.7□□□□□ -2.3
RPA1P27694 MIR548H3-201ENST00000408771 118 ntBASIC0.7□□□□□ -2.3
RPA1P27694 RNU2-70P-201ENST00000410718 179 ntBASIC0.7□□□□□ -2.3
RPA1P27694 RNA5SP247-201ENST00000411181 105 ntBASIC0.7□□□□□ -2.3
RPA1P27694 RPS26P5-201ENST00000418544 335 ntBASIC0.7□□□□□ -2.3
RPA1P27694 AC023449.1-201ENST00000454464 154 ntBASIC0.7□□□□□ -2.3
RPA1P27694 RNU6-1023P-201ENST00000516137 106 ntBASIC0.7□□□□□ -2.3
RPA1P27694 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.7□□□□□ -2.3
RPA1P27694 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
RPA1P27694 AC130289.1-201ENST00000577321 73 ntBASIC0.7□□□□□ -2.3
RPA1P27694 U6.106-201ENST00000636360 105 ntBASIC0.7□□□□□ -2.3
RPA1P27694 MIR342-201ENST00000362212 99 ntBASIC0.69□□□□□ -2.3
RPA1P27694 Y_RNA.412-201ENST00000384001 104 ntBASIC0.69□□□□□ -2.3
RPA1P27694 SNORA27-201ENST00000384323 126 ntBASIC0.69□□□□□ -2.3
RPA1P27694 SNORA2B-201ENST00000384583 137 ntBASIC0.69□□□□□ -2.3
RPA1P27694 RNU6-578P-201ENST00000390980 103 ntBASIC0.69□□□□□ -2.3
RPA1P27694 SNORD111-201ENST00000408139 94 ntBASIC0.69□□□□□ -2.3
RPA1P27694 RNU6-613P-201ENST00000410412 108 ntBASIC0.69□□□□□ -2.3
RPA1P27694 RNU6-847P-201ENST00000411115 108 ntBASIC0.69□□□□□ -2.3
RPA1P27694 AC067940.1-201ENST00000458411 300 ntBASIC0.69□□□□□ -2.3
RPA1P27694 RNU7-67P-201ENST00000459003 62 ntBASIC0.69□□□□□ -2.3
RPA1P27694 COX6CP6-201ENST00000490840 228 ntBASIC0.69□□□□□ -2.3
RPA1P27694 MIR6740-201ENST00000618268 113 ntBASIC0.69□□□□□ -2.3
RPA1P27694 AC141273.2-201ENST00000618989 130 ntBASIC0.69□□□□□ -2.3
RPA1P27694 SNORD115-34-201ENST00000362441 82 ntBASIC0.68□□□□□ -2.3
RPA1P27694 SNORD115-12-201ENST00000362583 82 ntBASIC0.68□□□□□ -2.3
RPA1P27694 SNORD115-29-201ENST00000362834 82 ntBASIC0.68□□□□□ -2.3
RPA1P27694 SNORD115-9-201ENST00000362912 82 ntBASIC0.68□□□□□ -2.3
RPA1P27694 SNORD115-21-201ENST00000362963 81 ntBASIC0.68□□□□□ -2.3
RPA1P27694 SNORD115-14-201ENST00000363090 81 ntBASIC0.68□□□□□ -2.3
RPA1P27694 SNORD115-13-201ENST00000363358 82 ntBASIC0.68□□□□□ -2.3
RPA1P27694 SNORD115-41-201ENST00000363608 82 ntBASIC0.68□□□□□ -2.3
RPA1P27694 SNORD115-11-201ENST00000363616 82 ntBASIC0.68□□□□□ -2.3
RPA1P27694 SNORD115-5-201ENST00000363633 82 ntBASIC0.68□□□□□ -2.3
RPA1P27694 SNORD115-39-201ENST00000363694 82 ntBASIC0.68□□□□□ -2.3
RPA1P27694 SNORD115-4-201ENST00000363810 82 ntBASIC0.68□□□□□ -2.3
RPA1P27694 SNORD115-16-201ENST00000363887 82 ntBASIC0.68□□□□□ -2.3
RPA1P27694 SNORD115-6-201ENST00000363942 82 ntBASIC0.68□□□□□ -2.3
RPA1P27694 SNORD115-42-201ENST00000364273 82 ntBASIC0.68□□□□□ -2.3
RPA1P27694 SNORD115-15-201ENST00000364809 81 ntBASIC0.68□□□□□ -2.3
RPA1P27694 SNORD115-1-201ENST00000364961 82 ntBASIC0.68□□□□□ -2.3
RPA1P27694 SNORD115-26-201ENST00000365067 82 ntBASIC0.68□□□□□ -2.3
RPA1P27694 SNORD115-10-201ENST00000365073 81 ntBASIC0.68□□□□□ -2.3
RPA1P27694 SNORD115-43-201ENST00000365503 82 ntBASIC0.68□□□□□ -2.3
RPA1P27694 SNORD115-36-201ENST00000365629 82 ntBASIC0.68□□□□□ -2.3
RPA1P27694 SNORD12C-201ENST00000386307 89 ntBASIC0.68□□□□□ -2.3
RPA1P27694 SNORA40.5-201ENST00000391061 128 ntBASIC0.68□□□□□ -2.3
RPA1P27694 SNORA26.6-201ENST00000391256 115 ntBASIC0.68□□□□□ -2.3
RPA1P27694 SNORD83.1-201ENST00000411362 77 ntBASIC0.68□□□□□ -2.3
RPA1P27694 RNU2-11P-201ENST00000459191 187 ntBASIC0.68□□□□□ -2.3
RPA1P27694 RNU6-504P-201ENST00000516568 104 ntBASIC0.68□□□□□ -2.3
RPA1P27694 MIR5000-201ENST00000577717 103 ntBASIC0.68□□□□□ -2.3
RPA1P27694 MIR4744-201ENST00000581563 82 ntBASIC0.68□□□□□ -2.3
RPA1P27694 SNORD115-40-201ENST00000606510 82 ntBASIC0.68□□□□□ -2.3
RPA1P27694 AC134878.1-201ENST00000619901 243 ntBASIC0.68□□□□□ -2.3
RPA1P27694 AC078938.1-201ENST00000620993 318 ntBASIC0.68□□□□□ -2.3
RPA1P27694 U6.104-201ENST00000637979 90 ntBASIC0.68□□□□□ -2.3
RPA1P27694 Y_RNA.7-201ENST00000362352 102 ntBASIC0.67□□□□□ -2.3
RPA1P27694 RNY1-201ENST00000364228 113 ntBASIC0.67□□□□□ -2.3
RPA1P27694 Y_RNA.571-201ENST00000384753 98 ntBASIC0.67□□□□□ -2.3
RPA1P27694 SNORD89-201ENST00000390981 114 ntBASIC0.67□□□□□ -2.3
RPA1P27694 RNU2-55P-201ENST00000411146 174 ntBASIC0.67□□□□□ -2.3
RPA1P27694 RNU6-602P-201ENST00000411155 105 ntBASIC0.67□□□□□ -2.3
RPA1P27694 RNA5SP153-201ENST00000516498 76 ntBASIC0.67□□□□□ -2.3
RPA1P27694 RNU6-1223P-201ENST00000517124 104 ntBASIC0.67□□□□□ -2.3
RPA1P27694 MRPS18CP4-201ENST00000535821 231 ntBASIC0.67□□□□□ -2.3
RPA1P27694 MIR4662B-201ENST00000579498 81 ntBASIC0.67□□□□□ -2.3
RPA1P27694 RNU6-379P-201ENST00000363813 104 ntBASIC0.66□□□□□ -2.3
RPA1P27694 Y_RNA.182-201ENST00000363880 111 ntBASIC0.66□□□□□ -2.3
RPA1P27694 SNORA20.1-201ENST00000364790 130 ntBASIC0.66□□□□□ -2.3
RPA1P27694 RNU6-580P-201ENST00000365159 107 ntBASIC0.66□□□□□ -2.3
RPA1P27694 RNY3P5-201ENST00000384127 102 ntBASIC0.66□□□□□ -2.3
RPA1P27694 Y_RNA.556-201ENST00000384677 113 ntBASIC0.66□□□□□ -2.3
RPA1P27694 RNU6-1067P-201ENST00000384752 107 ntBASIC0.66□□□□□ -2.3
RPA1P27694 MIR1302-3-201ENST00000408128 138 ntBASIC0.66□□□□□ -2.3
RPA1P27694 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.66□□□□□ -2.3
RPA1P27694 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.66□□□□□ -2.3
RPA1P27694 AL121914.1-201ENST00000450188 156 ntBASIC0.66□□□□□ -2.3
RPA1P27694 RPS29P24-201ENST00000486345 171 ntBASIC0.66□□□□□ -2.3
RPA1P27694 RNU6-998P-201ENST00000515894 101 ntBASIC0.66□□□□□ -2.3
RPA1P27694 RNU6-1219P-201ENST00000516143 112 ntBASIC0.66□□□□□ -2.3
RPA1P27694 SCARNA15-202ENST00000516881 127 ntBASIC0.66□□□□□ -2.3
RPA1P27694 AC020891.4-201ENST00000605745 93 ntBASIC0.66□□□□□ -2.3
RPA1P27694 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.3
RPA1P27694 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
RPA1P27694 MIR411-201ENST00000362239 96 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms