Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 RNU2-11P-201ENST00000459191 187 ntBASIC0.38□□□□□ -2.35
COL5A3P25940 Y_RNA.641-201ENST00000459414 105 ntBASIC0.38□□□□□ -2.35
COL5A3P25940 RNU2-13P-201ENST00000515909 113 ntBASIC0.38□□□□□ -2.35
COL5A3P25940 Y_RNA.777-201ENST00000516982 102 ntBASIC0.38□□□□□ -2.35
COL5A3P25940 AC025627.3-201ENST00000582078 182 ntBASIC0.38□□□□□ -2.35
COL5A3P25940 Y_RNA.771-201ENST00000598668 102 ntBASIC0.38□□□□□ -2.35
COL5A3P25940 AC006006.1-201ENST00000603082 144 ntBASIC0.38□□□□□ -2.35
COL5A3P25940 Y_RNA.789-201ENST00000622480 102 ntBASIC0.38□□□□□ -2.35
COL5A3P25940 SNORD38B-202ENST00000625943 69 ntBASIC0.38□□□□□ -2.35
COL5A3P25940 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.38□□□□□ -2.35
COL5A3P25940 MIR4251-201ENST00000635819 61 ntBASIC0.38□□□□□ -2.35
COL5A3P25940 Y_RNA.66-201ENST00000362862 102 ntBASIC0.38□□□□□ -2.35
COL5A3P25940 Y_RNA.133-201ENST00000363428 110 ntBASIC0.38□□□□□ -2.35
COL5A3P25940 Y_RNA.185-201ENST00000363894 100 ntBASIC0.38□□□□□ -2.35
COL5A3P25940 Y_RNA.275-201ENST00000364726 110 ntBASIC0.38□□□□□ -2.35
COL5A3P25940 Y_RNA.292-201ENST00000364904 97 ntBASIC0.38□□□□□ -2.35
COL5A3P25940 RNY3P5-201ENST00000384127 102 ntBASIC0.38□□□□□ -2.35
COL5A3P25940 Y_RNA.547-201ENST00000384654 119 ntBASIC0.38□□□□□ -2.35
COL5A3P25940 RNU6-713P-201ENST00000384761 107 ntBASIC0.38□□□□□ -2.35
COL5A3P25940 RNU6-602P-201ENST00000411155 105 ntBASIC0.38□□□□□ -2.35
COL5A3P25940 snoU13.16-201ENST00000459350 104 ntBASIC0.38□□□□□ -2.35
COL5A3P25940 Y_RNA.802-201ENST00000614892 130 ntBASIC0.38□□□□□ -2.35
COL5A3P25940 Y_RNA.37-201ENST00000362606 108 ntBASIC0.37□□□□□ -2.35
COL5A3P25940 Y_RNA.65-201ENST00000362846 100 ntBASIC0.37□□□□□ -2.35
COL5A3P25940 Y_RNA.199-201ENST00000364014 102 ntBASIC0.37□□□□□ -2.35
COL5A3P25940 RNU6-694P-201ENST00000364071 147 ntBASIC0.37□□□□□ -2.35
COL5A3P25940 Y_RNA.229-201ENST00000364347 113 ntBASIC0.37□□□□□ -2.35
COL5A3P25940 Y_RNA.276-201ENST00000364732 109 ntBASIC0.37□□□□□ -2.35
COL5A3P25940 Y_RNA.634-201ENST00000364811 113 ntBASIC0.37□□□□□ -2.35
COL5A3P25940 RNU6-934P-201ENST00000365154 107 ntBASIC0.37□□□□□ -2.35
COL5A3P25940 RNU6-728P-201ENST00000365375 104 ntBASIC0.37□□□□□ -2.35
COL5A3P25940 Y_RNA.351-201ENST00000365436 96 ntBASIC0.37□□□□□ -2.35
COL5A3P25940 RNU6-484P-201ENST00000384016 107 ntBASIC0.37□□□□□ -2.35
COL5A3P25940 MIR548A2-201ENST00000384956 97 ntBASIC0.37□□□□□ -2.35
COL5A3P25940 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.37□□□□□ -2.35
COL5A3P25940 FABP5P4-201ENST00000437203 171 ntBASIC0.37□□□□□ -2.35
COL5A3P25940 AC107297.1-201ENST00000459991 176 ntBASIC0.37□□□□□ -2.35
COL5A3P25940 AC091959.1-201ENST00000495857 238 ntBASIC0.37□□□□□ -2.35
COL5A3P25940 AC113410.1-201ENST00000505029 247 ntBASIC0.37□□□□□ -2.35
COL5A3P25940 SNORD77.4-201ENST00000516158 81 ntBASIC0.37□□□□□ -2.35
COL5A3P25940 Y_RNA.679-201ENST00000516416 91 ntBASIC0.37□□□□□ -2.35
COL5A3P25940 AC023827.1-201ENST00000569247 97 ntBASIC0.37□□□□□ -2.35
COL5A3P25940 MIR548AO-201ENST00000579992 96 ntBASIC0.37□□□□□ -2.35
COL5A3P25940 MIR5190-201ENST00000581537 80 ntBASIC0.37□□□□□ -2.35
COL5A3P25940 AL021707.8-201ENST00000609428 183 ntBASIC0.37□□□□□ -2.35
COL5A3P25940 uc_338.17-201ENST00000619633 179 ntBASIC0.37□□□□□ -2.35
COL5A3P25940 MIR8062-201ENST00000621515 85 ntBASIC0.37□□□□□ -2.35
COL5A3P25940 MIR6516-201ENST00000630554 81 ntBASIC0.37□□□□□ -2.35
COL5A3P25940 AC023934.1-201ENST00000574529 2389 ntBASIC0.37□□□□□ -2.35
COL5A3P25940 MIR342-201ENST00000362212 99 ntBASIC0.36□□□□□ -2.35
COL5A3P25940 SNORA25.1-201ENST00000362326 128 ntBASIC0.36□□□□□ -2.35
COL5A3P25940 RNA5SP98-201ENST00000363158 137 ntBASIC0.36□□□□□ -2.35
COL5A3P25940 RNU6-654P-201ENST00000364373 107 ntBASIC0.36□□□□□ -2.35
COL5A3P25940 SNORA63C-201ENST00000364578 129 ntBASIC0.36□□□□□ -2.35
COL5A3P25940 Y_RNA.277-201ENST00000364754 102 ntBASIC0.36□□□□□ -2.35
COL5A3P25940 RNU6-580P-201ENST00000365159 107 ntBASIC0.36□□□□□ -2.35
COL5A3P25940 RNU6-1138P-201ENST00000365359 106 ntBASIC0.36□□□□□ -2.35
COL5A3P25940 SNORD61-201ENST00000384252 73 ntBASIC0.36□□□□□ -2.35
COL5A3P25940 SNORA27-201ENST00000384323 126 ntBASIC0.36□□□□□ -2.35
COL5A3P25940 RNU6-1289P-201ENST00000384431 106 ntBASIC0.36□□□□□ -2.35
COL5A3P25940 RNU6-110P-201ENST00000384508 104 ntBASIC0.36□□□□□ -2.35
COL5A3P25940 MT-TN-201ENST00000387400 73 ntBASIC0.36□□□□□ -2.35
COL5A3P25940 MIR802-201ENST00000390235 94 ntBASIC0.36□□□□□ -2.35
COL5A3P25940 AL606845.1-201ENST00000404881 255 ntBASIC0.36□□□□□ -2.35
COL5A3P25940 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.36□□□□□ -2.35
COL5A3P25940 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.36□□□□□ -2.35
COL5A3P25940 AC087499.4-201ENST00000448505 178 ntBASIC0.36□□□□□ -2.35
COL5A3P25940 SNORD127-201ENST00000458892 86 ntBASIC0.36□□□□□ -2.35
COL5A3P25940 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.36□□□□□ -2.35
COL5A3P25940 PDCD5P2-201ENST00000507570 312 ntBASIC0.36□□□□□ -2.35
COL5A3P25940 RNY3P16-201ENST00000516338 101 ntBASIC0.36□□□□□ -2.35
COL5A3P25940 RNU7-25P-201ENST00000516544 62 ntBASIC0.36□□□□□ -2.35
COL5A3P25940 RNU6-126P-201ENST00000516685 103 ntBASIC0.36□□□□□ -2.35
COL5A3P25940 AC087685.1-201ENST00000587507 141 ntBASIC0.36□□□□□ -2.35
COL5A3P25940 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.36□□□□□ -2.35
COL5A3P25940 7SK.10-201ENST00000621414 298 ntBASIC0.36□□□□□ -2.35
COL5A3P25940 RNU6-923P-201ENST00000364753 107 ntBASIC0.35□□□□□ -2.35
COL5A3P25940 Y_RNA.410-201ENST00000383992 113 ntBASIC0.35□□□□□ -2.35
COL5A3P25940 Y_RNA.459-201ENST00000384251 102 ntBASIC0.35□□□□□ -2.35
COL5A3P25940 Y_RNA.483-201ENST00000384380 101 ntBASIC0.35□□□□□ -2.35
COL5A3P25940 RNU6-1228P-201ENST00000391014 107 ntBASIC0.35□□□□□ -2.35
COL5A3P25940 RNU1-119P-201ENST00000391122 165 ntBASIC0.35□□□□□ -2.35
COL5A3P25940 SNORA26-201ENST00000391286 122 ntBASIC0.35□□□□□ -2.35
COL5A3P25940 RNU7-73P-201ENST00000458743 63 ntBASIC0.35□□□□□ -2.35
COL5A3P25940 RNU6-327P-201ENST00000516270 127 ntBASIC0.35□□□□□ -2.35
COL5A3P25940 Y_RNA.757-201ENST00000578934 114 ntBASIC0.35□□□□□ -2.35
COL5A3P25940 MIR4744-201ENST00000581563 82 ntBASIC0.35□□□□□ -2.35
COL5A3P25940 MIR4282-201ENST00000583613 67 ntBASIC0.35□□□□□ -2.35
COL5A3P25940 MIR4493-201ENST00000584016 73 ntBASIC0.35□□□□□ -2.35
COL5A3P25940 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.35□□□□□ -2.35
COL5A3P25940 Y_RNA.35-201ENST00000362601 101 ntBASIC0.35□□□□□ -2.35
COL5A3P25940 Y_RNA.54-201ENST00000362766 105 ntBASIC0.35□□□□□ -2.35
COL5A3P25940 SNORA63-201ENST00000363450 132 ntBASIC0.35□□□□□ -2.35
COL5A3P25940 Y_RNA.241-201ENST00000364470 117 ntBASIC0.35□□□□□ -2.35
COL5A3P25940 SNORA24-201ENST00000384096 131 ntBASIC0.35□□□□□ -2.35
COL5A3P25940 RNU6-1237P-201ENST00000384777 107 ntBASIC0.35□□□□□ -2.35
COL5A3P25940 MIR568-201ENST00000385036 95 ntBASIC0.35□□□□□ -2.35
COL5A3P25940 MIR15B-201ENST00000385045 98 ntBASIC0.35□□□□□ -2.35
COL5A3P25940 MIR526A2-201ENST00000390198 65 ntBASIC0.35□□□□□ -2.35
COL5A3P25940 SNORA79-201ENST00000408376 140 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms