Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AP000942.4-201ENST00000604811 241 ntBASIC0.46□□□□□ -2.34
COL8A2P25067 AL442067.1-201ENST00000613261 223 ntBASIC0.46□□□□□ -2.34
COL8A2P25067 AC134878.1-201ENST00000619901 243 ntBASIC0.46□□□□□ -2.34
COL8A2P25067 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.45□□□□□ -2.34
COL8A2P25067 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.45□□□□□ -2.34
COL8A2P25067 Y_RNA.66-201ENST00000362862 102 ntBASIC0.45□□□□□ -2.34
COL8A2P25067 Y_RNA.91-201ENST00000363042 107 ntBASIC0.45□□□□□ -2.34
COL8A2P25067 Y_RNA.162-201ENST00000363683 102 ntBASIC0.45□□□□□ -2.34
COL8A2P25067 snoU2_19.4-201ENST00000364329 80 ntBASIC0.45□□□□□ -2.34
COL8A2P25067 Y_RNA.277-201ENST00000364754 102 ntBASIC0.45□□□□□ -2.34
COL8A2P25067 Y_RNA.634-201ENST00000364811 113 ntBASIC0.45□□□□□ -2.34
COL8A2P25067 Y_RNA.416-201ENST00000384014 113 ntBASIC0.45□□□□□ -2.34
COL8A2P25067 RNU6-484P-201ENST00000384016 107 ntBASIC0.45□□□□□ -2.34
COL8A2P25067 SNORA2B-201ENST00000384583 137 ntBASIC0.45□□□□□ -2.34
COL8A2P25067 MIR92A1-201ENST00000385233 78 ntBASIC0.45□□□□□ -2.34
COL8A2P25067 RNU6-381P-201ENST00000391259 108 ntBASIC0.45□□□□□ -2.34
COL8A2P25067 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.45□□□□□ -2.34
COL8A2P25067 SNORD127-201ENST00000458892 86 ntBASIC0.45□□□□□ -2.34
COL8A2P25067 RNU6-1045P-201ENST00000516321 107 ntBASIC0.45□□□□□ -2.34
COL8A2P25067 RNA5SP255-201ENST00000516370 107 ntBASIC0.45□□□□□ -2.34
COL8A2P25067 SCARNA15.1-201ENST00000516384 125 ntBASIC0.45□□□□□ -2.34
COL8A2P25067 SNORA18.4-201ENST00000516440 124 ntBASIC0.45□□□□□ -2.34
COL8A2P25067 RNU7-53P-201ENST00000516705 60 ntBASIC0.45□□□□□ -2.34
COL8A2P25067 RN7SL793P-201ENST00000583259 296 ntBASIC0.45□□□□□ -2.34
COL8A2P25067 AP000753.3-201ENST00000604083 169 ntBASIC0.45□□□□□ -2.34
COL8A2P25067 RNU6-94P-201ENST00000607728 107 ntBASIC0.45□□□□□ -2.34
COL8A2P25067 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
COL8A2P25067 MIR377-201ENST00000362145 69 ntBASIC0.44□□□□□ -2.34
COL8A2P25067 RNU6-653P-201ENST00000363074 106 ntBASIC0.44□□□□□ -2.34
COL8A2P25067 RNU6-103P-201ENST00000363686 107 ntBASIC0.44□□□□□ -2.34
COL8A2P25067 Y_RNA.168-201ENST00000363740 102 ntBASIC0.44□□□□□ -2.34
COL8A2P25067 SNORD45.3-201ENST00000363836 72 ntBASIC0.44□□□□□ -2.34
COL8A2P25067 SNORA27-201ENST00000384323 126 ntBASIC0.44□□□□□ -2.34
COL8A2P25067 Y_RNA.494-201ENST00000384432 111 ntBASIC0.44□□□□□ -2.34
COL8A2P25067 MT-TN-201ENST00000387400 73 ntBASIC0.44□□□□□ -2.34
COL8A2P25067 SNORA79-201ENST00000408376 140 ntBASIC0.44□□□□□ -2.34
COL8A2P25067 RNA5SP95-201ENST00000410319 137 ntBASIC0.44□□□□□ -2.34
COL8A2P25067 RNU6-938P-201ENST00000411285 103 ntBASIC0.44□□□□□ -2.34
COL8A2P25067 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.44□□□□□ -2.34
COL8A2P25067 SNRPGP8-201ENST00000454064 226 ntBASIC0.44□□□□□ -2.34
COL8A2P25067 U7.7-201ENST00000459276 60 ntBASIC0.44□□□□□ -2.34
COL8A2P25067 RPS29P24-201ENST00000486345 171 ntBASIC0.44□□□□□ -2.34
COL8A2P25067 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.44□□□□□ -2.34
COL8A2P25067 SNORD36C-201ENST00000516733 66 ntBASIC0.44□□□□□ -2.34
COL8A2P25067 RNU6-453P-201ENST00000516819 85 ntBASIC0.44□□□□□ -2.34
COL8A2P25067 RNU6-958P-201ENST00000516995 106 ntBASIC0.44□□□□□ -2.34
COL8A2P25067 MIR4643-201ENST00000577473 78 ntBASIC0.44□□□□□ -2.34
COL8A2P25067 AC097639.2-201ENST00000603159 172 ntBASIC0.44□□□□□ -2.34
COL8A2P25067 AC104465.1-201ENST00000611365 139 ntBASIC0.44□□□□□ -2.34
COL8A2P25067 AL136317.1-201ENST00000612653 226 ntBASIC0.44□□□□□ -2.34
COL8A2P25067 Y_RNA.133-201ENST00000363428 110 ntBASIC0.43□□□□□ -2.34
COL8A2P25067 Y_RNA.292-201ENST00000364904 97 ntBASIC0.43□□□□□ -2.34
COL8A2P25067 RNU6-728P-201ENST00000365375 104 ntBASIC0.43□□□□□ -2.34
COL8A2P25067 RNU6-1189P-201ENST00000383958 107 ntBASIC0.43□□□□□ -2.34
COL8A2P25067 Y_RNA.410-201ENST00000383992 113 ntBASIC0.43□□□□□ -2.34
COL8A2P25067 RNY1P4-201ENST00000384595 115 ntBASIC0.43□□□□□ -2.34
COL8A2P25067 Y_RNA.562-201ENST00000384695 113 ntBASIC0.43□□□□□ -2.34
COL8A2P25067 SNORD89-201ENST00000390981 114 ntBASIC0.43□□□□□ -2.34
COL8A2P25067 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.43□□□□□ -2.34
COL8A2P25067 AF228730.3-201ENST00000436691 102 ntBASIC0.43□□□□□ -2.34
COL8A2P25067 RNU7-73P-201ENST00000458743 63 ntBASIC0.43□□□□□ -2.34
COL8A2P25067 RNU7-96P-201ENST00000459535 64 ntBASIC0.43□□□□□ -2.34
COL8A2P25067 RNU6-1110P-201ENST00000516462 101 ntBASIC0.43□□□□□ -2.34
COL8A2P25067 MIR4711-201ENST00000578274 70 ntBASIC0.43□□□□□ -2.34
COL8A2P25067 MIR4264-201ENST00000583520 66 ntBASIC0.43□□□□□ -2.34
COL8A2P25067 MIR6779-201ENST00000617283 64 ntBASIC0.43□□□□□ -2.34
COL8A2P25067 uc_338.17-201ENST00000619633 179 ntBASIC0.43□□□□□ -2.34
COL8A2P25067 7SK.10-201ENST00000621414 298 ntBASIC0.43□□□□□ -2.34
COL8A2P25067 Y_RNA.76-201ENST00000362931 109 ntBASIC0.42□□□□□ -2.34
COL8A2P25067 SNORD27-201ENST00000363981 72 ntBASIC0.42□□□□□ -2.34
COL8A2P25067 RNU6-125P-201ENST00000384505 107 ntBASIC0.42□□□□□ -2.34
COL8A2P25067 RNU6-205P-201ENST00000390858 107 ntBASIC0.42□□□□□ -2.34
COL8A2P25067 AL035398.1-201ENST00000430869 322 ntBASIC0.42□□□□□ -2.34
COL8A2P25067 AL118496.2-201ENST00000448300 230 ntBASIC0.42□□□□□ -2.34
COL8A2P25067 Y_RNA.668-201ENST00000516233 93 ntBASIC0.42□□□□□ -2.34
COL8A2P25067 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.42□□□□□ -2.34
COL8A2P25067 AC025627.3-201ENST00000582078 182 ntBASIC0.42□□□□□ -2.34
COL8A2P25067 AL353765.1-201ENST00000605514 183 ntBASIC0.42□□□□□ -2.34
COL8A2P25067 AC011921.3-201ENST00000605540 361 ntBASIC0.42□□□□□ -2.34
COL8A2P25067 AC243829.3-201ENST00000622177 108 ntBASIC0.42□□□□□ -2.34
COL8A2P25067 MIR1-1-201ENST00000362147 71 ntBASIC0.41□□□□□ -2.34
COL8A2P25067 SNORA1.1-201ENST00000364671 133 ntBASIC0.41□□□□□ -2.34
COL8A2P25067 Y_RNA.350-201ENST00000365409 98 ntBASIC0.41□□□□□ -2.34
COL8A2P25067 RNU6-1335P-201ENST00000365426 107 ntBASIC0.41□□□□□ -2.34
COL8A2P25067 Y_RNA.440-201ENST00000384120 114 ntBASIC0.41□□□□□ -2.34
COL8A2P25067 Y_RNA.478-201ENST00000384358 107 ntBASIC0.41□□□□□ -2.34
COL8A2P25067 Y_RNA.542-201ENST00000384641 111 ntBASIC0.41□□□□□ -2.34
COL8A2P25067 SNORD38B-201ENST00000384690 67 ntBASIC0.41□□□□□ -2.34
COL8A2P25067 MIR568-201ENST00000385036 95 ntBASIC0.41□□□□□ -2.34
COL8A2P25067 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
COL8A2P25067 RNU6-913P-201ENST00000390913 95 ntBASIC0.41□□□□□ -2.34
COL8A2P25067 MIR1827-201ENST00000408549 66 ntBASIC0.41□□□□□ -2.34
COL8A2P25067 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.41□□□□□ -2.34
COL8A2P25067 AC114737.2-201ENST00000421583 173 ntBASIC0.41□□□□□ -2.34
COL8A2P25067 AC090844.1-201ENST00000422019 156 ntBASIC0.41□□□□□ -2.34
COL8A2P25067 RNU6-998P-201ENST00000515894 101 ntBASIC0.41□□□□□ -2.34
COL8A2P25067 MIR4744-201ENST00000581563 82 ntBASIC0.41□□□□□ -2.34
COL8A2P25067 SNORD38B-202ENST00000625943 69 ntBASIC0.41□□□□□ -2.34
COL8A2P25067 MIR5087-201ENST00000635826 76 ntBASIC0.41□□□□□ -2.34
COL8A2P25067 Z97988.1-201ENST00000637697 135 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms