Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC020891.4-201ENST00000605745 93 ntBASIC0.38□□□□□ -2.35
XRCC1P18887 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.37□□□□□ -2.35
XRCC1P18887 Y_RNA.66-201ENST00000362862 102 ntBASIC0.37□□□□□ -2.35
XRCC1P18887 RNU4-10P-201ENST00000364383 140 ntBASIC0.37□□□□□ -2.35
XRCC1P18887 RNU6-1189P-201ENST00000383958 107 ntBASIC0.37□□□□□ -2.35
XRCC1P18887 RNU6-1319P-201ENST00000390855 104 ntBASIC0.37□□□□□ -2.35
XRCC1P18887 RNU6-747P-201ENST00000390928 104 ntBASIC0.37□□□□□ -2.35
XRCC1P18887 RNU6-241P-201ENST00000391148 104 ntBASIC0.37□□□□□ -2.35
XRCC1P18887 RNU6-447P-201ENST00000410293 104 ntBASIC0.37□□□□□ -2.35
XRCC1P18887 RNU6-1118P-201ENST00000410382 104 ntBASIC0.37□□□□□ -2.35
XRCC1P18887 RNU6-1076P-201ENST00000410397 104 ntBASIC0.37□□□□□ -2.35
XRCC1P18887 RNU6-355P-201ENST00000410427 104 ntBASIC0.37□□□□□ -2.35
XRCC1P18887 RNU6-791P-201ENST00000410467 104 ntBASIC0.37□□□□□ -2.35
XRCC1P18887 RNA5SP261-201ENST00000410536 106 ntBASIC0.37□□□□□ -2.35
XRCC1P18887 RNU6-705P-201ENST00000410601 104 ntBASIC0.37□□□□□ -2.35
XRCC1P18887 RNU6-1100P-201ENST00000410691 104 ntBASIC0.37□□□□□ -2.35
XRCC1P18887 RNU6-860P-201ENST00000410860 104 ntBASIC0.37□□□□□ -2.35
XRCC1P18887 RNU6-1217P-201ENST00000411276 104 ntBASIC0.37□□□□□ -2.35
XRCC1P18887 RNU6-785P-201ENST00000411324 104 ntBASIC0.37□□□□□ -2.35
XRCC1P18887 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.37□□□□□ -2.35
XRCC1P18887 AF228730.3-201ENST00000436691 102 ntBASIC0.37□□□□□ -2.35
XRCC1P18887 RNU6-998P-201ENST00000515894 101 ntBASIC0.37□□□□□ -2.35
XRCC1P18887 AC020661.2-201ENST00000560114 134 ntBASIC0.37□□□□□ -2.35
XRCC1P18887 U6.90-201ENST00000614007 104 ntBASIC0.37□□□□□ -2.35
XRCC1P18887 MIR6740-201ENST00000618268 113 ntBASIC0.37□□□□□ -2.35
XRCC1P18887 U6.70-201ENST00000620287 104 ntBASIC0.37□□□□□ -2.35
XRCC1P18887 Y_RNA.26-201ENST00000362539 101 ntBASIC0.36□□□□□ -2.35
XRCC1P18887 Y_RNA.153-201ENST00000363615 91 ntBASIC0.36□□□□□ -2.35
XRCC1P18887 Y_RNA.634-201ENST00000364811 113 ntBASIC0.36□□□□□ -2.35
XRCC1P18887 Y_RNA.432-201ENST00000384087 111 ntBASIC0.36□□□□□ -2.35
XRCC1P18887 MIR125B2-201ENST00000385128 89 ntBASIC0.36□□□□□ -2.35
XRCC1P18887 MT-TF-201ENST00000387314 71 ntBASIC0.36□□□□□ -2.35
XRCC1P18887 MIR548I3-201ENST00000408378 149 ntBASIC0.36□□□□□ -2.35
XRCC1P18887 RNU6-985P-201ENST00000410182 104 ntBASIC0.36□□□□□ -2.35
XRCC1P18887 RNU6-602P-201ENST00000411155 105 ntBASIC0.36□□□□□ -2.35
XRCC1P18887 AC097639.2-201ENST00000603159 172 ntBASIC0.36□□□□□ -2.35
XRCC1P18887 AC010332.2-201ENST00000613083 1904 ntBASIC0.36□□□□□ -2.35
XRCC1P18887 AC090625.1-201ENST00000357130 210 ntBASIC0.35□□□□□ -2.35
XRCC1P18887 Y_RNA.44-201ENST00000362676 108 ntBASIC0.35□□□□□ -2.35
XRCC1P18887 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
XRCC1P18887 RNU6-484P-201ENST00000384016 107 ntBASIC0.35□□□□□ -2.35
XRCC1P18887 RNU6-364P-201ENST00000384387 107 ntBASIC0.35□□□□□ -2.35
XRCC1P18887 RNU6-1228P-201ENST00000391014 107 ntBASIC0.35□□□□□ -2.35
XRCC1P18887 MIR1257-201ENST00000408490 117 ntBASIC0.35□□□□□ -2.35
XRCC1P18887 RNU2-11P-201ENST00000459191 187 ntBASIC0.35□□□□□ -2.35
XRCC1P18887 SCARNA24.2-201ENST00000516968 130 ntBASIC0.35□□□□□ -2.35
XRCC1P18887 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.35□□□□□ -2.35
XRCC1P18887 AL162730.1-201ENST00000605734 292 ntBASIC0.35□□□□□ -2.35
XRCC1P18887 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.34□□□□□ -2.35
XRCC1P18887 Y_RNA.82-201ENST00000363000 102 ntBASIC0.34□□□□□ -2.36
XRCC1P18887 Y_RNA.92-201ENST00000363043 102 ntBASIC0.34□□□□□ -2.36
XRCC1P18887 RNU6-1309P-201ENST00000363305 108 ntBASIC0.34□□□□□ -2.36
XRCC1P18887 Y_RNA.235-201ENST00000364412 102 ntBASIC0.34□□□□□ -2.36
XRCC1P18887 Y_RNA.306-201ENST00000365015 102 ntBASIC0.34□□□□□ -2.36
XRCC1P18887 Y_RNA.312-201ENST00000365089 102 ntBASIC0.34□□□□□ -2.36
XRCC1P18887 Y_RNA.322-201ENST00000365151 102 ntBASIC0.34□□□□□ -2.36
XRCC1P18887 RNU6-639P-201ENST00000384074 107 ntBASIC0.34□□□□□ -2.36
XRCC1P18887 Y_RNA.440-201ENST00000384120 114 ntBASIC0.34□□□□□ -2.36
XRCC1P18887 MIR193B-201ENST00000384907 83 ntBASIC0.34□□□□□ -2.36
XRCC1P18887 MIR563-201ENST00000385080 79 ntBASIC0.34□□□□□ -2.36
XRCC1P18887 MIR616-201ENST00000385293 97 ntBASIC0.34□□□□□ -2.36
XRCC1P18887 SNORD100-201ENST00000408573 76 ntBASIC0.34□□□□□ -2.36
XRCC1P18887 AC015818.7-201ENST00000428754 109 ntBASIC0.34□□□□□ -2.36
XRCC1P18887 HMGN1P33-201ENST00000432945 451 ntBASIC0.34□□□□□ -2.36
XRCC1P18887 AC087499.7-201ENST00000441958 109 ntBASIC0.34□□□□□ -2.36
XRCC1P18887 Y_RNA.650-201ENST00000459002 102 ntBASIC0.34□□□□□ -2.36
XRCC1P18887 RNU7-185P-201ENST00000459215 60 ntBASIC0.34□□□□□ -2.36
XRCC1P18887 Y_RNA.777-201ENST00000516982 102 ntBASIC0.34□□□□□ -2.36
XRCC1P18887 AC090897.1-201ENST00000580909 226 ntBASIC0.34□□□□□ -2.36
XRCC1P18887 SNORD92-201ENST00000585078 85 ntBASIC0.34□□□□□ -2.36
XRCC1P18887 Y_RNA.771-201ENST00000598668 102 ntBASIC0.34□□□□□ -2.36
XRCC1P18887 Y_RNA.789-201ENST00000622480 102 ntBASIC0.34□□□□□ -2.36
XRCC1P18887 MIR302B-201ENST00000362188 73 ntBASIC0.33□□□□□ -2.36
XRCC1P18887 Y_RNA.216-201ENST00000364205 93 ntBASIC0.33□□□□□ -2.36
XRCC1P18887 SNORA33.2-201ENST00000365413 134 ntBASIC0.33□□□□□ -2.36
XRCC1P18887 Y_RNA.572-201ENST00000384757 98 ntBASIC0.33□□□□□ -2.36
XRCC1P18887 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.33□□□□□ -2.36
XRCC1P18887 SNRPGP8-201ENST00000454064 226 ntBASIC0.33□□□□□ -2.36
XRCC1P18887 SNORD2.1-201ENST00000458762 69 ntBASIC0.33□□□□□ -2.36
XRCC1P18887 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.33□□□□□ -2.36
XRCC1P18887 uc_338.6-201ENST00000613544 171 ntBASIC0.33□□□□□ -2.36
XRCC1P18887 AC092634.7-201ENST00000621022 103 ntBASIC0.33□□□□□ -2.36
XRCC1P18887 U6.104-201ENST00000637979 90 ntBASIC0.33□□□□□ -2.36
XRCC1P18887 Y_RNA.7-201ENST00000362352 102 ntBASIC0.32□□□□□ -2.36
XRCC1P18887 RNU6-797P-201ENST00000363101 109 ntBASIC0.32□□□□□ -2.36
XRCC1P18887 Y_RNA.542-201ENST00000384641 111 ntBASIC0.32□□□□□ -2.36
XRCC1P18887 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.32□□□□□ -2.36
XRCC1P18887 MTND5P22-201ENST00000458380 195 ntBASIC0.32□□□□□ -2.36
XRCC1P18887 RNU7-80P-201ENST00000459562 61 ntBASIC0.32□□□□□ -2.36
XRCC1P18887 TRBVB-201ENST00000477100 408 ntBASIC0.32□□□□□ -2.36
XRCC1P18887 RNU7-156P-201ENST00000517214 74 ntBASIC0.32□□□□□ -2.36
XRCC1P18887 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.32□□□□□ -2.36
XRCC1P18887 AL356055.1-201ENST00000602528 446 ntBASIC0.32□□□□□ -2.36
XRCC1P18887 MIR335-201ENST00000362173 94 ntBASIC0.31□□□□□ -2.36
XRCC1P18887 Y_RNA.91-201ENST00000363042 107 ntBASIC0.31□□□□□ -2.36
XRCC1P18887 Y_RNA.117-201ENST00000363294 101 ntBASIC0.31□□□□□ -2.36
XRCC1P18887 RNU6-740P-201ENST00000364734 105 ntBASIC0.31□□□□□ -2.36
XRCC1P18887 Y_RNA.454-201ENST00000384224 113 ntBASIC0.31□□□□□ -2.36
XRCC1P18887 RNU6-713P-201ENST00000384761 107 ntBASIC0.31□□□□□ -2.36
XRCC1P18887 RNU6-1109P-201ENST00000391187 107 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 169.8 ms