Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 AC243829.6-201ENST00000612652 106 ntBASIC0.42□□□□□ -2.34
VCLP18206 U6.90-201ENST00000614007 104 ntBASIC0.42□□□□□ -2.34
VCLP18206 U6.70-201ENST00000620287 104 ntBASIC0.42□□□□□ -2.34
VCLP18206 Y_RNA.7-201ENST00000362352 102 ntBASIC0.41□□□□□ -2.34
VCLP18206 Y_RNA.275-201ENST00000364726 110 ntBASIC0.41□□□□□ -2.34
VCLP18206 RNU6-1189P-201ENST00000383958 107 ntBASIC0.41□□□□□ -2.34
VCLP18206 RNU6-602P-201ENST00000411155 105 ntBASIC0.41□□□□□ -2.34
VCLP18206 HMGN1P33-201ENST00000432945 451 ntBASIC0.41□□□□□ -2.34
VCLP18206 AL138752.1-201ENST00000452964 351 ntBASIC0.41□□□□□ -2.34
VCLP18206 snoU13.2-201ENST00000459201 104 ntBASIC0.41□□□□□ -2.34
VCLP18206 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.41□□□□□ -2.34
VCLP18206 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.35
VCLP18206 Y_RNA.216-201ENST00000364205 93 ntBASIC0.4□□□□□ -2.35
VCLP18206 Y_RNA.432-201ENST00000384087 111 ntBASIC0.4□□□□□ -2.35
VCLP18206 RNU6-342P-201ENST00000384521 104 ntBASIC0.4□□□□□ -2.35
VCLP18206 Y_RNA.572-201ENST00000384757 98 ntBASIC0.4□□□□□ -2.35
VCLP18206 MIR216A-201ENST00000385063 110 ntBASIC0.4□□□□□ -2.35
VCLP18206 MIR125B2-201ENST00000385128 89 ntBASIC0.4□□□□□ -2.35
VCLP18206 MIR613-201ENST00000385248 95 ntBASIC0.4□□□□□ -2.35
VCLP18206 MIR548I3-201ENST00000408378 149 ntBASIC0.4□□□□□ -2.35
VCLP18206 MIR1257-201ENST00000408490 117 ntBASIC0.4□□□□□ -2.35
VCLP18206 AF228730.3-201ENST00000436691 102 ntBASIC0.4□□□□□ -2.35
VCLP18206 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.4□□□□□ -2.35
VCLP18206 RNU6-998P-201ENST00000515894 101 ntBASIC0.4□□□□□ -2.35
VCLP18206 RNA5SP153-201ENST00000516498 76 ntBASIC0.4□□□□□ -2.35
VCLP18206 AL589743.1-201ENST00000551932 2712 ntBASIC0.4□□□□□ -2.35
VCLP18206 MIR302B-201ENST00000362188 73 ntBASIC0.39□□□□□ -2.35
VCLP18206 Y_RNA.44-201ENST00000362676 108 ntBASIC0.39□□□□□ -2.35
VCLP18206 Y_RNA.66-201ENST00000362862 102 ntBASIC0.39□□□□□ -2.35
VCLP18206 Y_RNA.153-201ENST00000363615 91 ntBASIC0.39□□□□□ -2.35
VCLP18206 Y_RNA.634-201ENST00000364811 113 ntBASIC0.39□□□□□ -2.35
VCLP18206 RNU6-1203P-201ENST00000410703 110 ntBASIC0.39□□□□□ -2.35
VCLP18206 MTND5P22-201ENST00000458380 195 ntBASIC0.39□□□□□ -2.35
VCLP18206 RNU7-185P-201ENST00000459215 60 ntBASIC0.39□□□□□ -2.35
VCLP18206 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.39□□□□□ -2.35
VCLP18206 uc_338.6-201ENST00000613544 171 ntBASIC0.39□□□□□ -2.35
VCLP18206 AC092634.7-201ENST00000621022 103 ntBASIC0.39□□□□□ -2.35
VCLP18206 MIR342-201ENST00000362212 99 ntBASIC0.38□□□□□ -2.35
VCLP18206 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
VCLP18206 RNU6-679P-201ENST00000391003 106 ntBASIC0.38□□□□□ -2.35
VCLP18206 RNA5SP261-201ENST00000410536 106 ntBASIC0.38□□□□□ -2.35
VCLP18206 RNU6-570P-201ENST00000517051 105 ntBASIC0.38□□□□□ -2.35
VCLP18206 RNU7-156P-201ENST00000517214 74 ntBASIC0.38□□□□□ -2.35
VCLP18206 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.38□□□□□ -2.35
VCLP18206 AC020661.2-201ENST00000560114 134 ntBASIC0.38□□□□□ -2.35
VCLP18206 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.38□□□□□ -2.35
VCLP18206 Y_RNA.117-201ENST00000363294 101 ntBASIC0.37□□□□□ -2.35
VCLP18206 SNORD114-23-201ENST00000363536 72 ntBASIC0.37□□□□□ -2.35
VCLP18206 VTRNA1-3-201ENST00000365645 89 ntBASIC0.37□□□□□ -2.35
VCLP18206 Y_RNA.440-201ENST00000384120 114 ntBASIC0.37□□□□□ -2.35
VCLP18206 MT-TF-201ENST00000387314 71 ntBASIC0.37□□□□□ -2.35
VCLP18206 SNORD100-201ENST00000408573 76 ntBASIC0.37□□□□□ -2.35
VCLP18206 RNU6-985P-201ENST00000410182 104 ntBASIC0.37□□□□□ -2.35
VCLP18206 RNA5SP193-201ENST00000410353 107 ntBASIC0.37□□□□□ -2.35
VCLP18206 Y_RNA.622-201ENST00000411091 108 ntBASIC0.37□□□□□ -2.35
VCLP18206 RNU7-102P-201ENST00000458948 62 ntBASIC0.37□□□□□ -2.35
VCLP18206 AC090897.1-201ENST00000580909 226 ntBASIC0.37□□□□□ -2.35
VCLP18206 PVT1_3.1-201ENST00000620853 95 ntBASIC0.37□□□□□ -2.35
VCLP18206 AC090625.1-201ENST00000357130 210 ntBASIC0.36□□□□□ -2.35
VCLP18206 Y_RNA.91-201ENST00000363042 107 ntBASIC0.36□□□□□ -2.35
VCLP18206 Y_RNA.199-201ENST00000364014 102 ntBASIC0.36□□□□□ -2.35
VCLP18206 RNU6-484P-201ENST00000384016 107 ntBASIC0.36□□□□□ -2.35
VCLP18206 MT-TT-201ENST00000387460 66 ntBASIC0.36□□□□□ -2.35
VCLP18206 SNRPGP8-201ENST00000454064 226 ntBASIC0.36□□□□□ -2.35
VCLP18206 SNORA68.3-201ENST00000515906 83 ntBASIC0.36□□□□□ -2.35
VCLP18206 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.36□□□□□ -2.35
VCLP18206 RNA5SP117-201ENST00000365294 118 ntBASIC0.35□□□□□ -2.35
VCLP18206 Y_RNA.351-201ENST00000365436 96 ntBASIC0.35□□□□□ -2.35
VCLP18206 RNU6-639P-201ENST00000384074 107 ntBASIC0.35□□□□□ -2.35
VCLP18206 RNU6-713P-201ENST00000384761 107 ntBASIC0.35□□□□□ -2.35
VCLP18206 SNORD12C-201ENST00000386307 89 ntBASIC0.35□□□□□ -2.35
VCLP18206 RNU6-1228P-201ENST00000391014 107 ntBASIC0.35□□□□□ -2.35
VCLP18206 AL606845.1-201ENST00000404881 255 ntBASIC0.35□□□□□ -2.35
VCLP18206 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.35□□□□□ -2.35
VCLP18206 TRBVB-201ENST00000477100 408 ntBASIC0.35□□□□□ -2.35
VCLP18206 SNORA25.12-201ENST00000516202 82 ntBASIC0.35□□□□□ -2.35
VCLP18206 SNORD92-201ENST00000585078 85 ntBASIC0.35□□□□□ -2.35
VCLP18206 AL356055.1-201ENST00000602528 446 ntBASIC0.35□□□□□ -2.35
VCLP18206 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.35□□□□□ -2.35
VCLP18206 uc_338.16-201ENST00000621804 95 ntBASIC0.35□□□□□ -2.35
VCLP18206 MIRLET7D-201ENST00000362263 87 ntBASIC0.34□□□□□ -2.36
VCLP18206 RNU6-740P-201ENST00000364734 105 ntBASIC0.34□□□□□ -2.36
VCLP18206 MIR563-201ENST00000385080 79 ntBASIC0.34□□□□□ -2.36
VCLP18206 MIR616-201ENST00000385293 97 ntBASIC0.34□□□□□ -2.36
VCLP18206 RNU6-1190P-201ENST00000410811 104 ntBASIC0.34□□□□□ -2.36
VCLP18206 SNORD71-201ENST00000411292 86 ntBASIC0.34□□□□□ -2.36
VCLP18206 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.34□□□□□ -2.36
VCLP18206 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.34□□□□□ -2.36
VCLP18206 RNU7-80P-201ENST00000459562 61 ntBASIC0.34□□□□□ -2.36
VCLP18206 AC002350.1-201ENST00000490759 375 ntBASIC0.34□□□□□ -2.36
VCLP18206 RNU6-1137P-201ENST00000517073 99 ntBASIC0.34□□□□□ -2.36
VCLP18206 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.34□□□□□ -2.36
VCLP18206 RN7SL793P-201ENST00000583259 296 ntBASIC0.34□□□□□ -2.36
VCLP18206 Y_RNA.304-201ENST00000365011 112 ntBASIC0.33□□□□□ -2.36
VCLP18206 SNORA33.2-201ENST00000365413 134 ntBASIC0.33□□□□□ -2.36
VCLP18206 Y_RNA.393-201ENST00000383936 102 ntBASIC0.33□□□□□ -2.36
VCLP18206 Y_RNA.454-201ENST00000384224 113 ntBASIC0.33□□□□□ -2.36
VCLP18206 SNORA79-201ENST00000408376 140 ntBASIC0.33□□□□□ -2.36
VCLP18206 RPL39P25-201ENST00000449384 154 ntBASIC0.33□□□□□ -2.36
VCLP18206 Y_RNA.679-201ENST00000516416 91 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms