Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.58□□□□□ -2
NEFMP07197 RNU6-904P-201ENST00000516206 101 ntBASIC2.58□□□□□ -2
NEFMP07197 RNU7-6P-201ENST00000516845 62 ntBASIC2.58□□□□□ -2
NEFMP07197 HSPE1P19-201ENST00000603327 295 ntBASIC2.58□□□□□ -2
NEFMP07197 AC021613.1-201ENST00000623880 111 ntBASIC2.58□□□□□ -2
NEFMP07197 SNORA70.7-201ENST00000384159 133 ntBASIC2.57□□□□□ -2
NEFMP07197 MIR583-201ENST00000384846 75 ntBASIC2.57□□□□□ -2
NEFMP07197 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.57□□□□□ -2
NEFMP07197 RNU11-3P-201ENST00000391111 133 ntBASIC2.57□□□□□ -2
NEFMP07197 RNU6-893P-201ENST00000458841 100 ntBASIC2.57□□□□□ -2
NEFMP07197 RN7SL274P-201ENST00000492268 272 ntBASIC2.57□□□□□ -2
NEFMP07197 RNA5SP182-201ENST00000516064 82 ntBASIC2.57□□□□□ -2
NEFMP07197 RNA5SP168-201ENST00000516642 112 ntBASIC2.57□□□□□ -2
NEFMP07197 MIR5089-201ENST00000580047 84 ntBASIC2.57□□□□□ -2
NEFMP07197 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.57□□□□□ -2
NEFMP07197 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
NEFMP07197 RNU6-661P-201ENST00000362409 107 ntBASIC2.56□□□□□ -2
NEFMP07197 SNORD73B-201ENST00000364394 72 ntBASIC2.56□□□□□ -2
NEFMP07197 MIR597-201ENST00000384968 97 ntBASIC2.56□□□□□ -2
NEFMP07197 RNU6-816P-201ENST00000390914 107 ntBASIC2.56□□□□□ -2
NEFMP07197 RNU6-1268P-201ENST00000391214 107 ntBASIC2.56□□□□□ -2
NEFMP07197 RNU6-1239P-201ENST00000391310 107 ntBASIC2.56□□□□□ -2
NEFMP07197 RPS23P4-201ENST00000487908 423 ntBASIC2.56□□□□□ -2
NEFMP07197 RNU6-237P-201ENST00000515985 71 ntBASIC2.56□□□□□ -2
NEFMP07197 RNU7-12P-201ENST00000516030 62 ntBASIC2.56□□□□□ -2
NEFMP07197 Y_RNA.220-201ENST00000364244 109 ntBASIC2.55□□□□□ -2
NEFMP07197 RNU4-36P-201ENST00000364294 144 ntBASIC2.55□□□□□ -2
NEFMP07197 Y_RNA.299-201ENST00000364973 94 ntBASIC2.55□□□□□ -2
NEFMP07197 Y_RNA.507-201ENST00000384500 99 ntBASIC2.55□□□□□ -2
NEFMP07197 RNU6-1031P-201ENST00000384773 107 ntBASIC2.55□□□□□ -2
NEFMP07197 SUMO2P12-201ENST00000405924 140 ntBASIC2.55□□□□□ -2
NEFMP07197 SNORA19.1-201ENST00000410656 129 ntBASIC2.55□□□□□ -2
NEFMP07197 AL591806.2-201ENST00000433122 173 ntBASIC2.55□□□□□ -2
NEFMP07197 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.55□□□□□ -2
NEFMP07197 RNU6-109P-201ENST00000516364 107 ntBASIC2.55□□□□□ -2
NEFMP07197 RNU6-184P-201ENST00000516514 107 ntBASIC2.55□□□□□ -2
NEFMP07197 RNU7-181P-201ENST00000517234 74 ntBASIC2.55□□□□□ -2
NEFMP07197 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.55□□□□□ -2
NEFMP07197 Y_RNA.93-201ENST00000363066 109 ntBASIC2.54□□□□□ -2
NEFMP07197 Y_RNA.531-201ENST00000384589 121 ntBASIC2.54□□□□□ -2
NEFMP07197 MIR520A-201ENST00000384862 85 ntBASIC2.54□□□□□ -2
NEFMP07197 MIR518A2-201ENST00000384966 87 ntBASIC2.54□□□□□ -2
NEFMP07197 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.54□□□□□ -2
NEFMP07197 MIR1283-2-201ENST00000408621 87 ntBASIC2.54□□□□□ -2
NEFMP07197 MTATP8P2-201ENST00000435212 202 ntBASIC2.54□□□□□ -2
NEFMP07197 RNU2-11P-201ENST00000459191 187 ntBASIC2.54□□□□□ -2
NEFMP07197 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.54□□□□□ -2
NEFMP07197 AC004812.1-201ENST00000540773 146 ntBASIC2.54□□□□□ -2
NEFMP07197 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.54□□□□□ -2
NEFMP07197 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
NEFMP07197 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.54□□□□□ -2
NEFMP07197 RNA5SP276-201ENST00000362580 94 ntBASIC2.53□□□□□ -2
NEFMP07197 SNORD115-19-201ENST00000363098 82 ntBASIC2.53□□□□□ -2
NEFMP07197 SNORD115-18-201ENST00000363293 82 ntBASIC2.53□□□□□ -2
NEFMP07197 SNORD115-17-201ENST00000364612 82 ntBASIC2.53□□□□□ -2
NEFMP07197 RNU6-49P-201ENST00000384256 107 ntBASIC2.53□□□□□ -2
NEFMP07197 Y_RNA.494-201ENST00000384432 111 ntBASIC2.53□□□□□ -2
NEFMP07197 MIR136-201ENST00000385207 82 ntBASIC2.53□□□□□ -2
NEFMP07197 RPS3AP1-201ENST00000413190 320 ntBASIC2.53□□□□□ -2
NEFMP07197 RNU7-53P-201ENST00000516705 60 ntBASIC2.53□□□□□ -2
NEFMP07197 DEFB131E-201ENST00000532329 154 ntBASIC2.53□□□□□ -2
NEFMP07197 MIR4299-201ENST00000577899 72 ntBASIC2.53□□□□□ -2
NEFMP07197 FAM71BP1-201ENST00000604431 523 ntBASIC2.53□□□□□ -2
NEFMP07197 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2.01
NEFMP07197 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.53□□□□□ -2.01
NEFMP07197 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
NEFMP07197 Y_RNA.107-201ENST00000363190 121 ntBASIC2.52□□□□□ -2.01
NEFMP07197 SNORA48.1-201ENST00000390879 135 ntBASIC2.52□□□□□ -2.01
NEFMP07197 RNA5SP261-201ENST00000410536 106 ntBASIC2.52□□□□□ -2.01
NEFMP07197 RNU2-7P-201ENST00000410794 178 ntBASIC2.52□□□□□ -2.01
NEFMP07197 RNA5SP450-201ENST00000411206 102 ntBASIC2.52□□□□□ -2.01
NEFMP07197 POLR2J4-204ENST00000418424 324 ntBASIC2.52□□□□□ -2.01
NEFMP07197 snoU13.23-201ENST00000458863 104 ntBASIC2.52□□□□□ -2.01
NEFMP07197 SNORA31.4-201ENST00000516049 129 ntBASIC2.52□□□□□ -2.01
NEFMP07197 MIR3152-201ENST00000579801 74 ntBASIC2.52□□□□□ -2.01
NEFMP07197 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.52□□□□□ -2.01
NEFMP07197 AC012493.3-201ENST00000604494 112 ntBASIC2.52□□□□□ -2.01
NEFMP07197 AC087741.2-201ENST00000619415 172 ntBASIC2.52□□□□□ -2.01
NEFMP07197 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.52□□□□□ -2.01
NEFMP07197 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.51□□□□□ -2.01
NEFMP07197 Y_RNA.10-201ENST00000362371 110 ntBASIC2.51□□□□□ -2.01
NEFMP07197 SNORA4.2-201ENST00000365313 147 ntBASIC2.51□□□□□ -2.01
NEFMP07197 Y_RNA.370-201ENST00000365589 108 ntBASIC2.51□□□□□ -2.01
NEFMP07197 MIR488-201ENST00000365739 83 ntBASIC2.51□□□□□ -2.01
NEFMP07197 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
NEFMP07197 RNU6-1319P-201ENST00000390855 104 ntBASIC2.51□□□□□ -2.01
NEFMP07197 RNU6-747P-201ENST00000390928 104 ntBASIC2.51□□□□□ -2.01
NEFMP07197 RNU6-241P-201ENST00000391148 104 ntBASIC2.51□□□□□ -2.01
NEFMP07197 RNU6-177P-201ENST00000411257 104 ntBASIC2.51□□□□□ -2.01
NEFMP07197 AL512326.2-201ENST00000426359 151 ntBASIC2.51□□□□□ -2.01
NEFMP07197 AC113410.1-201ENST00000505029 247 ntBASIC2.51□□□□□ -2.01
NEFMP07197 AC015712.3-201ENST00000559380 164 ntBASIC2.51□□□□□ -2.01
NEFMP07197 AL513423.1-201ENST00000621695 132 ntBASIC2.51□□□□□ -2.01
NEFMP07197 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
NEFMP07197 MIR516B2-201ENST00000385190 85 ntBASIC2.5□□□□□ -2.01
NEFMP07197 SNORA26.2-201ENST00000390922 122 ntBASIC2.5□□□□□ -2.01
NEFMP07197 RNU7-113P-201ENST00000459273 62 ntBASIC2.5□□□□□ -2.01
NEFMP07197 RNU7-34P-201ENST00000459394 64 ntBASIC2.5□□□□□ -2.01
NEFMP07197 RNA5SP481-201ENST00000516814 122 ntBASIC2.5□□□□□ -2.01
NEFMP07197 RNU6-295P-201ENST00000516901 104 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 262.3 ms